Ptychodera flava: 139118453
Help
Entry
139118453 CDS
T10724
Name
(RefSeq) transcription factor Sox-3-like isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
pfll Ptychodera flava
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfll03000
]
139118453
Transcription factors [BR:
pfll03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
139118453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
139118453
NCBI-ProteinID:
XP_070537851
LinkDB
All DBs
Position
19:complement(6440815..6568243)
Genome browser
AA seq
327 aa
AA seq
DB search
MMEQTDLKQTSMITQVQHNSLTATPPTPTSTTSTAKQMIPDNRVKRPMNAFMVWSRGQRR
KMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTK
TLMKKDKYALPGMIAGPGAPVQRSVAEGMQYPLNGYMNGYPMMQPEQLPAHHTYQHHGLG
GAPSQMAPANGGLHPRYDMSSQIYTPMCSAGSYVNPSTSYTMAAPYTTQQTSQMHPSSAA
AGVPKSEPAMVSAAQAAAVRSGRSCPGDLREMISMYLPGDANDPNAQNRQHSSAMAQEHY
ASQNPSSGVGVNDRLRFLQMMGSPYED
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcaaacggacttgaaacagaccagcatgattacccaggtccaacataattcg
ctaactgccactccgccaacaccaacctcaacgacgtccacagcgaaacaaatgatacca
gacaaccgtgtgaaacgtcccatgaatgccttcatggtgtggtctcgtggtcaacggcgg
aagatggcacaggagaatccaaaaatgcacaattctgagataagtaagcgacttggggct
gagtggaagttgttgtcagaggctgagaagcgaccatttatcgatgaggccaagagactt
cgggctgttcacatgaaggaacaccccgattataaatacagaccacgacgaaagaccaag
acacttatgaagaaagacaagtatgctttgccaggaatgatagctgggcccggagccccc
gttcaacggtcggtggccgaaggtatgcagtatcccttaaacgggtatatgaatggttac
cctatgatgcaaccagaacaactcccagcacatcacacatatcaacatcatggtttgggt
ggcgcaccttcgcaaatggcgccggcaaatggcggacttcacccgcggtatgacatgtcg
agccaaatttatacacctatgtgttcggccggctcatacgtcaacccatccacaagttat
accatggcagcgccctacacaacacaacaaacaagccaaatgcacccttcttcggcagcg
gctggtgtacccaagtcagaaccggcaatggtgagcgcggcacaggcggcagcggtcagg
agcggcaggagttgtccgggcgatttgcgggaaatgatctcaatgtatctaccaggcgat
gccaatgaccccaacgcacagaatcgacaacacagttctgcaatggcacaagaacattac
gcatcgcagaatccatcttcaggagtcggggtaaacgatcgtcttcgattcctacaaatg
atggggtcaccatacgaagactga
DBGET
integrated database retrieval system
