Ptychodera flava: 139118566
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Entry
139118566 CDS
T10724
Name
(RefSeq) autophagy-related protein 16-1-like isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
pfll Ptychodera flava
Pathway
pfll04136
Autophagy - other
pfll04140
Autophagy - animal
pfll04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
139118566
04140 Autophagy - animal
139118566
04136 Autophagy - other
139118566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pfll04131
]
139118566
03029 Mitochondrial biogenesis [BR:
pfll03029
]
139118566
Membrane trafficking [BR:
pfll04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
139118566
Others
Specific organelles associated proteins
Auto phagosome
139118566
Mitochondrial biogenesis [BR:
pfll03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
139118566
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
ATG16
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_VPS8
Beta-prop_WDR75_1st
ANAPC4_WD40
NBCH_WD40
CFAP251_N
Beta-prop_NWD2_C
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_ACSF4
Beta-prop_HPS5
Beta-prop_SPT8
ASA1
FKBP15
CCDC110
PAC11
CCDC89
CCDC39
ENOX1
ADIP
FUSC
Spectrin
Motif
Other DBs
NCBI-GeneID:
139118566
NCBI-ProteinID:
XP_070538022
LinkDB
All DBs
Position
19:11526488..11555523
Genome browser
AA seq
566 aa
AA seq
DB search
MNILKTLSITETFRKQRAAVNTEHRSACFAQMSVIKRNNKIFEGTDSMRSQNFQLQIQVE
KLKQENLDLQVKVETGGNNEGGKASNEKIQSLEQKLFKLQEELTEMHRRKGENAQQFINV
SHQLQEREKELSSKDNELSTTLSTLEALRKEMKNLEETISEKETAYQLLKDEHQALQLAC
TSYEEKLRKTQAENEELITRWMELKGKQAEFLNLDNEDYHRRKQTKLKKEIDEAVKTQVV
ISPPKGMDRLRSGSTSSAICYSAVIPTHAHHKLDAHDGEVNAVRFSSSGSVCATGGADRK
IKLWEYTQGQLQLRGSLTGSNAGIMCVDFDTSDQHVLGASNDFASRVWSIGDHRLRHTLT
GHSGKVLTAKFMGDPYKVVSGSHDRTLKLWDLRSRACTRTIFAGSSCNDLVTSDLAGSTV
ISGHFDKRIRFWDTRSDTSSNEITLQGRVTSLDLSPDNRSMLLACTRDDSLKIIDLRMSQ
VITTCCADGFHVGNDYTRAVFSPDGQYALAGSQDGSVCIWETNTGRLETRLTKEHSSSVV
AVAWHPTGAMVMSCDRTKKAILWSDI
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttaaagaccttatcaataaccgaaacatttagaaaacaacgtgcagcggtc
aacactgaacacagatcagcctgttttgcacagatgtctgtcattaagagaaacaataag
atatttgaaggaacagactctatgaggtctcaaaatttccagctccaaattcaagtggag
aagcttaaacaggaaaatctagatttacaagtcaaagtagagacaggggggaacaatgaa
ggaggcaaagcttcaaacgagaagattcagtcactggaacagaaattattcaagctgcaa
gaggaactaactgaaatgcatcgtagaaagggagaaaatgcccagcagtttataaatgtc
agtcatcagctacaagaaagggaaaaagagcttagctctaaggacaatgaacttagcact
actctttcaactctagaagcactcagaaaagaaatgaaaaatttagaagaaacaatttca
gaaaaagaaactgcatatcagcttttaaaagatgaacaccaagcactccaacttgcgtgt
acgtcgtacgaagaaaaactaaggaagacgcaagcagagaacgaagaattgatcactcga
tggatggagctgaaaggaaaacaggcagaatttttaaacttagacaatgaagattatcat
cgaaggaaacagacaaaacttaagaaggagatcgatgaagccgttaaaactcaagttgta
atatcaccaccaaaaggaatggacaggcttagaagtggatccacgtcttcagcaatatgt
tattctgcagtcataccaacacatgcacatcacaaactagatgcccatgatggtgaagta
aacgctgtgagattttcatcatcgggcagcgtctgtgcaactggtggtgcagataggaaa
atcaaactctgggaatacacccagggtcagctacagttgagaggctcacttacaggaagc
aatgcaggtataatgtgtgttgattttgatacttcggaccaacacgttctaggtgcctct
aatgattttgcaagtagagtatggagtataggagaccataggctaaggcatacactgaca
ggccatagtggaaaagtactcacagccaagttcatgggcgatccttacaaagtcgtttct
ggcagccacgacaggacgctgaaactctgggaccttaggagcagagcctgtacaaggacc
atatttgctggttcaagttgtaatgacttggtaaccagtgaccttgcagggtccacagtc
atcagtggtcactttgataaaagaattcgattctgggacaccagatctgacacaagctcc
aatgaaataacacttcaaggcagagtgacatccttagatctatcaccagataatagatcc
atgttgctggcgtgcaccagagatgattccttgaaaatcatcgatcttagaatgagtcaa
gtcatcacaacatgttgtgctgatggttttcatgtaggaaacgattacacgagagccgtg
ttcagtcctgatggacagtatgctttagcagggtcacaggacggatcagtgtgtatctgg
gaaacaaatactggcaggctagaaactaggctaacgaaagaacacagttcctcagttgta
gcagtcgcctggcatcctacaggtgcaatggttatgagctgtgataggactaagaaagcc
atactctggtcagatatttga
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integrated database retrieval system
