Ptychodera flava: 139120355
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Entry
139120355 CDS
T10724
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
pfll Ptychodera flava
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfll03019
]
139120355
Enzymes [BR:
pfll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139120355
Messenger RNA biogenesis [BR:
pfll03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
139120355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
OB_NTP_bind
HA2_C
DEAD
HA2_N
AAA_22
Rad17
AAA_19
ResIII
AAA_16
nSTAND3
Motif
Other DBs
NCBI-GeneID:
139120355
NCBI-ProteinID:
XP_070540795
LinkDB
All DBs
Position
20:23635552..23661309
Genome browser
AA seq
1320 aa
AA seq
DB search
MSRHTHRDYSSSHGHKRRGDFSTERGFDGDASNEERPRGHNRRQERSLSPRRTTAKDGKR
QGEHEHIDHRKSKDSSSSHKKSKHRDRERKSKSKRRKTGDSETDKTSRKRRKSDDTDRDV
TSKDRRESEPGVHHKATDTDRKKYGNDGRATTSRSPRIPDEIIHSHAGTSGRHDSAHDTE
RRQAVKFWDVEWIEWQKHQAELDAIFFRDRDFIKRGTKDYEDFWAFFKKYQAFQSRKQAS
TEGHPSNIDASDRSSNRLGLPKNYDKRYRINVSLKSKDYEHYSTPYSVSGERDYDKLSRE
KVSEFRRVLLHYVDFCQKQQFNKLAKLRRDQANLPIAQYREKIVNAVRAHQVVVVAGDTG
CGKSTQVPQYLLAAGFTNIACTQPRRIACISLAKRVGYETLHEFGSEVAYKIRFESTKNI
FTRILFLTEGLLLRQISTDSTLSQYNVIVIDEVHERHIHTDFLLGVLRCLLQHRKDLKIV
LMSATINISLFSGYFNDAPVIQVPGRLYPIKLEYVPISQEEQSSKSERLDPRPYLRIMQR
IDNKYPSTERGDLLIFLSGMSEITSVADAARQYAMHTKRWIILPLHSTLSVSEQDKVFDI
APEGVRKCIVSTNIAETSVTIDGVRFIVDSGKVKEMSYDPKAKMQRLQEFWISRASAEQR
KGRAGRTGPGVCFRLYEESDYNEFQEYTTPEIQRVPLDSLILQMIAMGLPNARSFPFIEP
PPASSIENSILFLKEQGALTKDEKLTPIGKMLAQLPVDVVIGKMLIMGTVFHVIHPVLSI
AAALSVQSPFTNKAYHNIDIATARRPLESDHGDPFTLLNAYDEWLQTKSEGRGSSRNWCK
RRGLEEQRFYEMSKLRQQFKDLLKESGLLGMAGQDRQYSSLERNQRNMEREKLKKMKREQ
RHATRKRKILKLEQDDYEISDKSDNEDIDIADIDFKLTHDIDQMKEMSTVSHSFTLRDIN
LLKVILCSGLYPQIAISDECNSYRKDSDQIFHTKSKPFVVLHPTGVFANNPDILEPRIKN
KMKWMPXRMNFGNQHELLSFVSLLETNKPYLMNTMRVPALQTMLLYSQSIDTNEDCTRIV
VDEWIEFRFKESESAQYLLSSTVQLRSTWQRLLQMKLEDTMSMSRDRTDTSSPANLNVLR
MERILASKLSEFLDSDVHYSVRKLRSTEAAHLYACADKQEDNLQSQADIKFFKVQSSDSR
PHPTKGGNQVNEYLTYGCLLDEETASKMEGFSSVIRKHWTCPTCNKSLIVTVLEKIQHES
QCAGDTESKEDNAETDKELARNKPDQMSHLKKSYHCPDCQQDFQFTAVEILKHKRSHKKS
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagacatactcatcgtgattacagctcaagccatgggcataaacgacgaggagac
ttttcgaccgaaagaggtttcgacggagacgcctcgaatgaagagcgccctcgcggacac
aatcgccgtcaagaaagaagtctatcaccaaggaggactactgccaaggatgggaaacgc
caaggagagcatgaacacatcgatcaccgcaagagtaaggattcaagctcttctcacaaa
aagagcaaacacagagatcgtgaaagaaagagtaaatcgaaacgcaggaaaaccggggac
agtgaaaccgacaagacaagtcgaaagcgcagaaagagtgatgatactgacagagatgtg
acttcgaaagatcgcagggaatcagaaccaggcgttcatcataaagctactgacactgac
aggaaaaaatatggaaatgatggaagagcgacaacatcaagaagccccagaatcccggat
gaaattatccattcacacgctggcacaagtggcagacatgacagtgctcatgacacagag
agaagacaggctgttaagttttgggatgttgagtggattgaatggcaaaaacaccaggca
gaacttgatgcaatctttttcagagaccgtgatttcataaagagagggacaaaagactat
gaagatttttgggcattcttcaagaaatatcaagcattccaaagcagaaagcaggcatca
actgaaggtcatccttctaacattgatgcctctgatcgatccagcaacagattgggatta
ccaaagaactatgacaagagatacagaatcaatgtttcattgaaatcaaaagattatgaa
cactattcaacaccgtattctgtgtcaggagaaagagattatgacaagcttagcagagag
aaagtgtctgaattccgccgagttctgctccactatgttgatttctgccaaaagcagcag
ttcaacaagctggcaaagcttcgcagagatcaggctaatttacccatcgcacagtacaga
gagaagattgtcaatgcagtgagagcccatcaggtggttgtagttgctggagataccgga
tgtgggaagtctacacaggttcctcagtatctgttggcggcaggattcaccaacatagca
tgcacacaacctcgacggattgcctgcatttccctagcaaagagagtcggctatgaaaca
ctccatgagtttggctctgaagtcgcatacaagattagatttgagtcaaccaagaatata
tttacaaggattttgtttctaacagagggtttactgctcagacagatatccactgactct
accttatcgcagtacaatgtcattgtgattgatgaagtccatgaaagacacatccatacc
gacttccttctcggtgtcttgagatgtctactgcaacaccgtaaggatctcaagattgtc
ttgatgtcagccacaatcaacatcagtctcttctctggatatttcaatgatgcaccagtc
atacaggtaccaggaagactttatccaatcaagttggaatacgtcccaataagtcaggag
gagcagtctagcaaatcagagagactcgacccaagaccctatctgcgcatcatgcaacgc
attgacaataagtatcccagcacagagagaggagatttgttgatatttctgagtggaatg
tcggagataactagcgttgcagacgcagccagacagtatgccatgcatacaaagagatgg
attatactgccattacacagtacactgtcagtatctgaacaagacaaggtgtttgacatt
gctcctgaaggtgttcgtaaatgcattgtatcaaccaacatagcagagacttcagtgacc
atcgatggcgtcagatttattgtagattctggcaaggtgaaagagatgagttatgatccc
aaggcgaagatgcaaagattgcaagagttctggatcagtagagccagcgctgaacagaga
aaaggaagagcaggtaggacaggtccgggtgtctgctttagactctatgaagaatctgac
tacaatgaattccaagaatacacaactcctgaaatccagcgagttcctctggactccctg
atcttgcaaatgatcgcaatgggattacccaatgccagaagttttccattcattgagcca
cccccggcgtcaagcattgaaaactccatactcttcctcaaagagcaaggagctttgacc
aaagatgagaaactgacaccaattggtaaaatgcttgcccagttaccagtggatgttgtc
atcggtaaaatgctcatcatgggaactgtcttccatgtcatacaccctgtgttgtcaata
gcagcggctttgagtgtgcagtcaccgttcaccaataaagcctatcacaatattgacatt
gctactgcaagacgccctctagagtcagaccatggagatccattcactttgctcaatgcc
tatgatgagtggctacagaccaagtcagaagggaggggatcatctaggaattggtgtaaa
agaagaggacttgaggagcagagattctacgagatgtccaaactcagacaacaattcaaa
gatcttctgaaggagagtggcctgcttggcatggctggacaggacagacagtacagcagt
ctagagagaaaccagagaaacatggaaagagagaagctcaagaagatgaaacgagagcag
agacacgccacaagaaaaagaaaaatccttaaactggaacaggatgactatgaaatcagt
gacaaaagtgataatgaagatattgacatcgctgatattgatttcaaactcacccatgac
attgatcagatgaaggaaatgtcgactgtgagtcacagttttactctaagagacatcaac
ctcctgaaggtgattctgtgcagcggactttatccacagattgcaatctctgatgagtgt
aattcttacaggaaggattccgatcaaatcttccacaccaagtccaaaccatttgtagtg
ttgcatccgaccggtgtgtttgccaacaatccagacatactggagccaaggataaagaat
aaaatgaaatggatgccanctaggatgaatttcggcaatcaacacgaattactttcattt
gtgtcattgctggaaaccaacaagccatacctgatgaataccatgagagtcccagctctg
cagacgatgttactgtattctcagagtattgatacaaatgaagactgcaccaggattgta
gtggatgagtggattgaattccgattcaaagagagtgaatcagctcagtatctactgtcc
agcaccgtacagctcagatcaacatggcagagattactacagatgaaactggaagacacc
atgtcaatgtcacgagacaggacagatacaagcagtccagctaatctgaatgtcctgaga
atggagagaattctagccagtaaattatcagagtttttagacagtgatgtccattacagt
gtgagaaaactccgatctactgaagctgctcatctctatgcctgtgctgacaaacaggag
gacaatttacaaagccaagctgatataaagtttttcaaagttcaaagttcagacagcaga
ccacacccaacgaaaggtggcaatcaggttaatgaatacttaacatatggatgtctgtta
gatgaagagacagctagcaaaatggaaggattcagctctgtgatcagaaaacactggaca
tgtcctacatgcaacaagtcattgatagtaacagtgctggagaagatacaacatgaaagc
cagtgtgcaggagatacagaatccaaagaagacaacgcagagactgacaaggagttagct
aggaacaaacctgaccagatgagtcatttgaaaaagtcatatcactgccctgactgtcag
caggatttccagttcacagcggttgagattttaaaacacaaaaggtcacacaagaagtca
tga
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