Ptychodera flava: 139120387
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Entry
139120387 CDS
T10724
Name
(RefSeq) DNA polymerase lambda-like
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
pfll Ptychodera flava
Pathway
pfll03410
Base excision repair
pfll03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
139120387
03450 Non-homologous end-joining
139120387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfll03400
]
139120387
Enzymes [BR:
pfll01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
139120387
DNA repair and recombination proteins [BR:
pfll03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
139120387
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
139120387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
BRCT
HHH_5
Cdd1
BUD22
NTP_transf_2
DNA_pol_B_exo2
BRCT_2
Motif
Other DBs
NCBI-GeneID:
139120387
NCBI-ProteinID:
XP_070540868
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All DBs
Position
20:complement(24724649..24737201)
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AA seq
620 aa
AA seq
DB search
MSSRALSKKRGASVTETGRSKKKAKTSSSSGCKQTSAAAADSPLPNSRPATHGFLSGVEV
FILQAGLGKARAEIFGRQLKKFGGAVHDKFTEETKYIIVDELMEIDRLLRILKVDAPPAN
VKIVKASWLSSCLSEERLLETGDFELDIKSFLKLRQNKADEKDEGRKTEVRCKLPESRQK
VDTVVTETEEKDENAQSTDASEKQSRGVADEDERSEAKPSDGQVFVPVRRHDSDDSSYEP
SDDEDYASKLSKFSASSSDMSSAASSSTSTPNTSPQKLPKGNWVCAKAVTNRLTNHNKHI
TDKLAILMETYKNTKDQWRALSYSKAIMALKNYPKEITSWEEANNIPGIGQKLADKVWEI
VQSGHLRKIDHVCQGEDVATINLFNKIHGVGPTVARDFYQQGFRTIDDLREKAKLSRQQK
IGLKHFDDFLDRMQREEATEIEKVVVDMAHSINPGLIGMACGSYRRGKPTCGDVDVLITH
PDGHSHKGVFQKLLEKLRATGFITDDLVSHEDSGEQKKYLGVCKLPGENRKHRRLDIIVV
PYHEYPCAIMYFTGSSHFNRSMRALAGKKGMSLNEHALKSGVIRKGREKINEGVAVPVKS
EEDVFRILGLEYRTPVERDW
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcagagcattgtctaagaaacgaggcgcgtccgtcactgaaacggggcgttca
aaaaagaaagcgaaaacaagttcctcctcgggatgtaaacaaacaagcgcggcggctgca
gattccccgctgccgaactcaaggcctgctacacatggatttttaagcggcgtcgaagtt
ttcattcttcaggctggtctcggtaaggcaagagcagaaatcttcggtaggcaactcaag
aaatttggcggcgcagttcatgacaaatttactgaagaaaccaaatacatcatcgtggac
gagcttatggaaattgacagactgctcagaattctgaaagtcgatgcgccgcctgcaaat
gttaaaattgtgaaagcaagctggctcagcagctgtctctctgaggaacggttactcgaa
acaggtgattttgaacttgacattaaaagttttctcaaactcagacagaacaaagcagat
gaaaaggacgaaggaaggaaaactgaagtgagatgtaaactcccggaaagtcgtcagaaa
gtggacactgtcgtcacggaaacagaggaaaaggatgagaatgcgcaaagcactgatgcg
tctgaaaagcaaagtcgcggtgttgccgatgaggacgaacgttcagaggcaaagccaagt
gatggacaggtgtttgtgccggtccgtcgtcatgacagtgatgacagtagttatgaaccc
agcgacgatgaagattatgcgtccaaactgagtaaattttcagcctcttcgtctgatatg
agttcagctgcaagttcgtcgacatcaacaccaaacacatcaccccagaaactcccgaaa
gggaactgggtttgtgctaaggctgtgaccaacagactgacaaaccacaataaacatatc
acagataagttggcgattcttatggagacttacaagaacaccaaagaccaatggagagca
ctgagttattctaaagctatcatggcactcaagaactaccctaaagaaatcacaagctgg
gaggaagctaataatattccgggcattggtcagaaattggcagataaagtctgggaaatt
gttcagagcggacatctgagaaagatagatcatgtatgtcagggagaggacgtggcaact
atcaacctgttcaacaagattcacggcgtaggtccgactgttgccagggatttctaccaa
cagggtttcaggacaatagatgacctgagggaaaaggcaaaactaagcaggcaacagaag
attggactgaagcatttcgatgatttcctggacaggatgcaaagggaagaggcgacagag
attgaaaaagttgtagttgatatggcacattccatcaacccaggactgatagggatggcc
tgtggatcctatcgccgcgggaaaccaacctgtggtgatgtggacgtcctcatcacacac
cctgatggacattctcacaagggtgtcttccagaaacttcttgagaaacttagagctaca
ggtttcatcacagatgatctggtcagtcacgaggactccggagagcagaagaagtattta
ggtgtttgtaaattacctggtgaaaacagaaagcatcgacgattagacatcatagtggta
ccctaccatgaatacccatgtgcaatcatgtatttcacaggatctagtcatttcaatcga
tccatgagggcattggcaggcaagaagggaatgtcactgaatgaacatgccttgaaatct
ggagtgatacgtaagggaagagagaagattaacgagggtgtggctgtccctgtcaagtca
gaggaagatgttttcagaattctgggcttggaataccgaacccctgtggagagagactgg
tga
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