Ptychodera flava: 139120604
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Entry
139120604 CDS
T10724
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
pfll Ptychodera flava
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfll03009
]
139120604
Ribosome biogenesis [BR:
pfll03009
]
Eukaryotic type
90S particles
Other 90S particles
139120604
Pre-60S particles
Other pre-60S particles
139120604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
MMS19_C
TPR_CAND1
Piezo_TM25-28
FemAB
Motif
Other DBs
NCBI-GeneID:
139120604
NCBI-ProteinID:
XP_070541212
LinkDB
All DBs
Position
20:complement(30533640..30557054)
Genome browser
AA seq
1297 aa
AA seq
DB search
MARGPGRIKGGKGKRWKKGHSSSSNPQTKSHRQNAKSRFFHQTTAGGSGLTETALKRHNQ
AVLDDDDVEIQDVDKQTVSDRSCGTFMSGLTDCTNPTFDKVKKFWDNNSASHKEICAVLA
AVTEVIRAQGGKETETEYFAALVTTLETVDTEESKAAVLYLLNMVMKRIAPSVLKSRFSM
VSKPLLEILAQHSGTAVSPLLRSTLSCLATLLRVQEIAVWNDASTLQVYHGILSFSIHPK
PKVRRAAHQAVCAILKGSTFMSQGDPPPYHPAASATAKFCIQQIEDTGGAGEAHATLHVL
GLLKDILGVFPQSSLKSTCETILRVMTLSNVLVMSCAMQALHGMFLLKPKPSSLPADLNA
QLINALYDYQPSENDVQPSLAWLAVMEKAHNNLQRVDERLCISHLPRIFSTAMKCFASEK
REITQAATQTLKELLQHCVKPAAERLQNEVKSAPSGCLTSGHKMFKAVESGLAYKYHASW
GLVLQVLGVFFEVLGKECPEMMKKCLQSIADLRNTHQFLYIYELDKAVGMAVRTMGPRMV
LEAIPLQVTGNEDNYDFPRSWLIPVLRDNTRETELQFFIRYFLPLAAKLKTRSLELQQSG
HLVESKTYDVLQSQMWSLLPGFCTNPTDLCQSFKNIARILGSVLTDRPDLRPDVCSALRL
LISKNVDNEENKAEVAKYAKNFLPILFNIYTTVDAEKKDYTRFTVLETIKTYLTVTDPKL
VNNFLDKAMDKLSTEVASVVKHAVMDLCIAMVTHIDSDKLNKVYRTTVVPFLQSQDKTMQ
KKSYRILEEICGSSSDASQKFVEDNISELQEILLNTLASSISSSKAPRLRCLTYLVKRLS
SEHSNFIESITGEIILCTKEVGIKARQAAFTLLIEVGNTMVRLNPDKTKQECLGRYVETV
SAGLVGSPTMVSATIVALTRLLYELRDKLPSDVLGELIDGICILLKSRNRDIVQSALGFV
KVLISVLSDIALAQHLQKLIDSVVTWNSDSRHHFRFKVKSLFGRLMKKYGYETIFKMVPE
NYRKMLKNTQKIQERNKKRKALKEANKVSDEDENESAPTHKTKPESIEELLQDTDSEDDM
DEEEKKPKKRDRVAKKQKTAAWLQEDADEEPLDFLDPAVSKRVLATNPDLESTKKKAAAK
HEFKTAPDGRLIITMDDDDDEGEETSKRKKASMDDLDVLMEESAPAKGNRKRKLEEDSDE
EVITKYKAGGSGIHRPVKVAKRSNLPPGAEYRAKKAGGDMKRRGMPDPYAYVPLNMKQLN
KRKKAKSSGQWKSIVKAARRGAKKGIQIKGQKRKGRK
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaggtccaggacgaattaaaggtggcaaaggaaagcgttggaagaaggggcac
agtagcagttccaacccacaaacaaaatcccatcgacaaaatgcgaaaagccgattcttc
caccaaacaactgctggtggcagtggtcttactgaaacagcactaaagcgacacaaccaa
gccgtgttggatgatgacgatgttgagatccaggatgtagacaaacaaactgtcagtgac
agatcctgtggtacattcatgagtggcctcactgattgcaccaatcctacatttgacaag
gtcaaaaaattttgggataataattcagccagccacaaagagatttgtgcagttttagca
gcagtcactgaagtgattcgtgcacagggaggcaaagaaactgaaactgaatattttgct
gcattggtaacaactttagagacagttgacacagaagaatcaaaagcggctgttctttat
ctgctcaacatggtcatgaaaaggattgctccttcagttctcaaaagtcgtttttcaatg
gtcagcaaacccttactggagatcctagcacagcacagtggcacagcagtttcacctcta
ctcaggtcaactctgtcgtgtttagctactctactgagggtacaagaaattgcagtgtgg
aatgatgcatctacgctgcaagtttatcatggcattcttagcttcagtattcatccaaag
ccaaaggtgcgtcgagctgcccatcaggcagtgtgtgcaatactgaaaggaagtacattt
atgagtcaaggagacccaccaccctaccatcctgcagcgtcagctactgccaagttttgc
attcaacaaattgaggatactggaggtgcaggagaagcccatgccactcttcatgtactt
ggattgttgaaggatatccttggtgtatttcctcagagtagtcttaagtcaacctgtgag
acaatcttacgtgtcatgactctcagcaatgtgcttgtcatgtcatgtgccatgcaggct
ctgcacggcatgtttctactcaaaccaaagcccagcagtctaccggcagatcttaatgct
cagctgatcaatgctttatatgactaccagcccagcgaaaatgatgtacagccttcgctg
gcgtggctcgctgtcatggaaaaagcccataataatctgcaaagggtggatgaaagacta
tgcatcagtcacttaccaaggattttcagcactgccatgaaatgttttgcgtctgaaaag
cgagaaataacacaagcagcaacacagactctgaaggaattacttcaacactgtgtgaag
ccagcagctgaaagacttcaaaatgaagtgaagagtgcccccagtggctgtctgacgtca
ggccataaaatgttcaaagcggttgaaagtggattagcttataaatatcacgcttcttgg
ggacttgtcttgcaagtattaggagtgttctttgaggtactgggtaaagagtgccctgag
atgatgaagaaatgtttacagtcgattgctgatctccgaaatactcatcagtttctgtac
atctatgaattagacaaagctgtgggcatggcagtacggaccatgggaccaagaatggtc
ttagaggctatacctctacaggtcactggaaatgaagataactatgatttccctagaagt
tggttgataccagtattgagagacaataccagagaaacagagcttcaattcttcatcaga
tacttcctaccactggctgcaaagttgaaaaccagatcattggaactacaacagagtggt
cacctggttgaaagtaaaacttatgatgttctccaatcacaaatgtggtccttgctgcct
ggattctgtaccaatccaactgacctctgccagtctttcaagaatattgctagaatcttg
ggaagtgtgctgacggacagacctgatttaagacctgacgtgtgcagcgccctcaggcta
ttgattagtaagaatgttgacaatgaggaaaacaaagctgaagttgctaaatatgccaag
aacttccttccaattctcttcaatatttataccactgttgatgctgagaagaaagattac
accagatttacagtcttggaaaccatcaagacttacctcactgtgacagatcctaagctt
gtgaacaacttcctcgacaaagccatggacaaactgagtacagaggttgcatctgttgtc
aaacatgctgtcatggatctctgtattgctatggtaacacatattgattcagacaaactc
aataaagtttacagaacaacagttgtaccatttctgcagagtcaagacaagacaatgcag
aagaaatcatatcgcattttggaagaaatatgtggcagttcatcagatgctagtcagaaa
tttgtggaggataatatatcagagttgcaagaaatactactcaatactctagcatcatca
atatcatcttccaaagctccaagactcagatgtctgacataccttgtgaagaggttgtct
tcagaacacagtaacttcatcgagtccataactggagagatcattctgtgcaccaaggaa
gttggcatcaaagccagacaggcagcatttacattacttattgaagttggcaatactatg
gtcagattaaaccctgataagactaaacaagagtgtttaggtagatacgtagaaacagta
tcagctgggctggttggttcaccaaccatggtcagtgctacaattgtggctctgacaaga
ttattatatgaacttagagacaaacttcccagtgatgtgttaggagaactcatcgatggc
atctgcatactcttgaaatctcgcaatcgtgatatcgtccagtctgcattgggctttgtc
aaagttctcataagtgttctgagtgatatagccctggctcaacacctgcaaaagctgatt
gatagcgtggtgacttggaacagtgacagtcgacatcacttcagattcaaagtgaagagt
ctttttggtagactaatgaagaaatacgggtatgaaactattttcaaaatggtgcctgaa
aattaccgcaaaatgctgaagaacacccagaaaatacaggaaagaaataaaaagaggaaa
gcgctgaaggaagctaataaagtgtctgatgaagacgaaaacgaaagtgctccgactcac
aaaacaaaaccagaaagtattgaagaattgctgcaagatactgactctgaagacgatatg
gatgaggaggaaaagaaaccgaagaagagagacagggttgctaagaaacaaaagactgct
gcttggttacaagaggatgcagatgaagaacctcttgatttcttggatccagctgtctca
aagagagtgctggccacaaatcctgatttggaatctaccaagaagaaagctgctgcaaaa
catgagtttaaaacagccccagatggcagactgatcataacaatggatgatgatgatgat
gaaggggaagaaaccagtaagaggaaaaaagccagtatggatgatctggatgtactcatg
gaagaatctgcccctgccaagggaaatcgtaaacgtaaacttgaagaagactctgatgaa
gaagtcataaccaaatacaaagctggtggtagtggaattcacagaccagtgaaagttgcc
aagaggagtaatcttccacctggtgcagagtacagggccaagaaagcgggtggcgacatg
aaaagacgtggcatgcctgatccctatgcatacgtaccattgaatatgaaacaactgaac
aaaaggaaaaaagccaaatcttcaggacagtggaagtccattgtgaaagcagcaagaaga
ggagccaagaagggaattcaaatcaaaggacaaaaacggaaaggaagaaaataa
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