Ptychodera flava: 139121638
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Entry
139121638 CDS
T10724
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear cap-binding protein subunit 1-A-like
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pfll Ptychodera flava
Pathway
pfll03013
Nucleocytoplasmic transport
pfll03015
mRNA surveillance pathway
pfll03040
Spliceosome
Brite
Messenger RNA biogenesis [BR:
pfll03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
139121638
Spliceosome [BR:
pfll03041
]
Common components
Common spliceosomal components
Cap binding complex
139121638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139121638
NCBI-ProteinID:
XP_070542802
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Position
21:complement(19312305..19373034)
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AA seq
789 aa
AA seq
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MSRRRPHSDDEEGGRTHKRRRTTSDHNEIEDRLESLITRVGEKSTSSLETNLEGLASVLE
ADLPSYKPKIAKILVFCAISLPEKISVYSTLVGLLNARNYNFGGEFVENVFRNLREFLKT
GSFEKARVLVRFLTDLVNCHVIDLSSMLAMYEAFVAVTIEDEIPQVRSDWYVYAVLSSIP
WIGKELHDKKEMELEKLLSNIEKYISKRKKRYMPFLKVWTSDVPNPQEEYLDCLWHQIEK
LKKEKWVERTILRPYLAFDSILCEALQHTLPPINPPAHSEDMSYPLPRVIFRLFDYTDTP
EGPVLPGHHSIDRFLIEETLSQIIHTHHKERKECAAQLVSYHGKNKVPLNYMIIEVMFGQ
MLNLPQPPYLEIFYASLLIELCKLQPSSLPQVLAQATELLYERLDTMNVASVDRFVNWFS
HHLSNFQFRWSWEDWAECVTANAEAPKPKFVRETLEKCMRLSYHQRIAESVPEDFAALVP
EKPSPIYKYTAEGSGSLPGTVTAHQLIASIKAKATAEEVLSILKELPNPKQEDDQMEDEN
SFNPLRIDVFVLTVLHMGSKSFSHSFSALAKFHSVFKALADSEESQMYMLNKVYEIWQNH
HQMISVLVDKMLRTQIVDCSSVANWLFSKDMSRDFTRYYVWEMMNSTIRKMNKHVNKIAK
ELQEARAKLDKRDRGSDSEDSDTDMPSEEQVERLQERLETAQSEQKNLFLIIFQRFIIIL
TEHIVKSENEGQDFNTHWYKQVRDRLQQVFLSHHEQVEKYIGTLENLLFTNDIDQHILEV
FQQFRALTM
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgccgaagaccacacagtgacgacgaagaaggaggacgtactcataagagacgt
cgcacaacatctgatcacaatgagattgaagatcggcttgaatcccttatcacacgagtt
ggagaaaagagcacctcatccctagaaaccaatttagaaggtcttgccagtgtactggaa
gcagatttgccatcatataaacccaaaattgcaaagattctggtcttttgtgccatcagt
ttgccagagaagatatcagtctacagtactttggtgggcctgctcaatgcacgcaactac
aactttggaggggagtttgttgaaaatgtcttcagaaatctgagagagttcctcaaaaca
ggcagctttgagaaagctcgggtgttggtcagatttttgacagatttggtgaattgccat
gtcatcgacctttcatccatgcttgccatgtacgaagcatttgttgccgtgacaatagag
gatgaaatccctcaagtccgaagtgactggtacgtctatgctgtcctgtcatcaattccc
tggattggaaaagagctgcatgacaagaaagagatggagcttgaaaagttgctgtcaaat
attgaaaagtacataagtaaacgcaagaaacgatacatgccattcctgaaagtgtggaca
tcagatgttccaaatccacaagaggagtatctagactgtttatggcaccagattgagaag
ctcaagaaggagaagtgggtggaaaggacaattctgagaccatacctggcatttgacagc
atcctgtgtgaggctctccagcatacacttccaccaatcaacccaccagcacattccgag
gacatgagttacccactaccccgagtcatcttccgactctttgattacacagacactcca
gagggaccagtattaccagggcatcattccattgaccgctttctcatcgaagagactctg
tcacagatcatccatactcatcacaaagagcggaaagaatgtgcagctcagctggtaagt
taccacggcaagaacaaggtaccgctcaactacatgatcatcgaagtgatgtttggacag
atgttgaatcttccccagccaccgtacctggagatattctatgcctctttgctgattgaa
ctctgtaagctccagccatcatcacttcctcaagttcttgcacaagccacagaattgttg
tatgaacgtctggacaccatgaatgttgcctcagtggatagatttgtcaactggttctct
catcatctcagtaactttcagttcagatggagctgggaggactgggctgaatgtgtcact
gctaatgctgaagcacccaagccgaagtttgtaagggaaactcttgagaaatgcatgagg
ctatcgtaccatcagcgcatagcagaatctgtgccagaagactttgcggctcttgtccct
gagaaaccatcaccaatatacaagtacacagcagaaggaagtggaagtttgcctggcacc
gtgacagctcatcagctgattgccagcatcaaggctaaagctactgccgaagaggttttg
agcatcttgaaagaattgccaaacccaaagcaagaagatgatcaaatggaagatgaaaac
agttttaatcccctgaggatcgatgtctttgtgttgacagtgttacacatgggaagcaaa
tctttcagccattctttcagtgcccttgccaagttccattcggtgttcaaagctttggca
gacagtgaagaaagccaaatgtacatgctgaacaaagtctatgaaatctggcagaaccat
caccagatgatctctgtcttagtggacaagatgttgagaacacaaatcgtggattgctca
tcagttgctaactggctgttttctaaggatatgtcccgggatttcaccagatactacgtg
tgggagatgatgaattcaacaattcgcaagatgaacaagcatgtgaataagatagcaaag
gaactgcaagaagccagagccaaactggacaaaagggatcgcggcagcgacagtgaagac
agcgatacagacatgccgtctgaggagcaagttgaaaggttgcaggaaagactggaaact
gcccagagtgaacagaaaaacctcttcttgatcatattccagaggtttatcatcatccta
acggagcacatcgtgaagagtgagaatgaaggccaagacttcaacacccactggtacaaa
caagtccgagatagacttcaacaggtcttcctttctcatcatgagcaagttgagaagtac
atcggtactctggaaaacttgttgttcacaaatgacattgatcaacacatcttggaggtg
ttccaacagttcagagctctcaccatgtga
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