Ptychodera flava: 139121807
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Entry
139121807 CDS
T10724
Name
(RefSeq) spatacsin-like isoform X1
KO
K19026
spatacsin
Organism
pfll Ptychodera flava
Brite
DNA repair and recombination proteins [BR:
pfll03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
139121807
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139121807
NCBI-ProteinID:
XP_070543105
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Position
21:24549470..24589574
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AA seq
1510 aa
AA seq
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MAIMAKCKGSLCIILQELPLSVKTTASTAAHFDARGETIGIISDAGLVSLLKVGTEEVCT
DILDGLAISQFVWDSAVIDSKLQTMQMFAVITKDSQVQLHRLQEEGQSFVQEKIAGCSFE
VVTTALGTFVGTDFSSPVDLRVLSLQGSLLTVLIDTTVCRLALSDDGAVEILQSYNIGIP
VQEISQTRVIQGMLVVLQNVGIISFHSLDKKEKVAVVCIQEYISQRHSTSSSHEDIGTEF
KHFAISEDLINLVVCDSRENLIPIDLNAYFHHNQQNLLRKNRRDRVGVPGEAGQCEGDGP
SYLEKRNRYRNISTDNNRKWVNQLDHMRMRSTHRFSCSGVLSGRRGVGVPTIHHRTNKRS
QNWYENAEGVRMTTKWVRTCNDDSAKTFSDDKVVHGFMRRNRRMSRQSQDVQCSQLTVPD
TSVTLPSSVDKEAMTVSRLYISGASVSAWYTARPGTETHAVQSAVCMFDLCSGQQELCEF
REPACVVFSPINTHPHLIVMGSAIATVMFNEEQEAFVNKLMMYDSATVADSVCRVNRWDR
CSIPIHALEVGLRHRQLDTVAFFLKSRETVFTMPYHPKHTQPPPRTQIQASVLGAAAGSP
FRSQMDTFQLESAVELLIATIKDNINGDMQSKLFGEQLLHMTLEFVNHLMRNATSQAQVQ
EEETGSVDEDLKNSIDKVIKYLSELRKYQKDVPEQLGQKVTSKQDVQVEKSEDFQYYMPD
KSNFTDRRLESWKHMTRQEIIQDGILNSCIPLVQAHLHRHDKTTVRSQPSRLKDILDAGL
SEVYQFLLQRNLRTSAKMLNNMGFDVTEQLRRLCLYTSNRTLRDFLIEELEKSKQLTEEE
LKMVQFVQKLERLYTCRSYERAKEMAEETRKSYWENTHRLSRTPTMQAKSILSSLIKTGD
LEPSDPMNYDSDGYSHVILEWVRTWDEETKQRILLDRVFHSNDSSLLTTFDPKTRWQYLL
SHNLWDKICQWINEDSSEITAEMLNDMSHCTTYVKDRVLDEMARRGLFSSEELASFEKLL
HRLSRSGSLMVKPHTLSKSTILSVDDFNAKFIGFCLQHCLPNVLYFYLDFFRIAVTSEET
QQLLSAYGDVPWFEMLLFFREVGMKYKDPTAMFCASLANSRLLQNSPRTVSALLEANRPL
AAMATLVYAPGTLNEVTLPVENEKDRLWKVNPELLQKSLLAYPKLQSALFPVQTADGVVA
QDITMYQLLKGNSPFDPSRLFRWQSTNNMSTQNNGGEDVEIPHFARSDLVSKYGHKEVLR
YTYYLRRGRPSFAFITFVKSLGDSDASQIKKRMKQAYWKAYMVALTNFTNSAICAACTTF
SEMLGHDSLAIRVDIQSSNLIYSHQKKMADKITDKKTKQQKVKDTEEDIVSDFMSLLRHR
RNCAEKILAELENAIVESIKNSDEESTSLETSQQWSLAVLFCHLHKLPYTSVYLRECAED
NQWLRFLCFAQNYQYPQKQVLELVRNFQDANIREHLQHAWNTYSTPAMKDSSNRGNPRKP
GNPEISELSI
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atggccatcatggcgaagtgtaaaggcagcctatgcattatcctgcaagaactcccatta
tctgtaaagactaccgcatcaacagcagcacattttgatgcaaggggtgaaaccatagga
attataagtgacgcaggtcttgtaagtttgttgaaagttggaacagaagaagtttgcaca
gacattctggacggccttgcaatatcccagtttgtttgggacagtgctgtcattgatagc
aaactgcagacaatgcagatgtttgctgtcataaccaaagatagtcaagtccagctgcat
cgtttgcaagaagaaggccaaagttttgtacaagaaaaaatcgcaggctgtagctttgaa
gttgtaacaactgctctagggacatttgtaggaacagatttttccagcccggtagatttg
agggtactttctctacaaggtagtcttctgactgtgctaattgacaccactgtctgcaga
cttgcattgagtgacgacggcgctgttgaaatactgcagtcgtacaacattggcatacct
gtccaagaaatttcccaaacaagagtcattcaaggaatgcttgtggttctacaaaatgtt
ggtattatctcatttcattccctggacaagaaagagaaagttgccgttgtttgcatccaa
gagtatatttcacagagacactccacgtctagtagtcatgaagatattggcacggaattt
aaacattttgcaatatcagaagatctgattaatttagtggtttgtgattcaagagaaaat
ttaattcctatagacttgaatgcctattttcaccataatcaacaaaatttgttgagaaag
aaccgtagggatagggttggtgttccaggagaggctggacaatgtgagggggatgggccg
agttatttggaaaagaggaatagataccggaacattagtacagacaataacagaaaatgg
gtgaatcagcttgatcacatgagaatgagatccactcaccgattttcatgcagtggtgtt
ttgtcaggaagacgtggtgtcggtgtgccgacaatacaccacaggacaaacaagagaagt
cagaactggtacgagaatgccgaaggagtcaggatgacaacaaagtgggtcaggacatgc
aatgatgatagcgcaaagacgttttctgatgataaggtagttcacggtttcatgaggagg
aaccgcaggatgtcgcgtcaaagtcaagatgtccagtgttcacaactcacagtaccagat
acatctgtcactctgccctcatcagttgacaaggaagcgatgacggtgtcccgactctac
ataagtggagcgtcagtttctgcctggtatacagccagaccagggacagagacccatgca
gtacaatctgcagtgtgtatgtttgatctgtgcagtggacagcaagaactctgtgagttc
agagagccagcttgtgttgtcttttctcccatcaacactcacccacacttgatagtgatg
gggtctgccattgccactgtcatgttcaatgaagaacaagaagcatttgtcaacaagttg
atgatgtacgacagtgccactgtggcagacagtgtatgcagagtcaatagatgggatagg
tgttcaattcctatccatgcactggaagttggactgagacacagacagttagatacagtt
gcattcttcttgaaaagtagggaaacagtgtttaccatgccatatcatcccaaacacaca
caaccaccaccccgcactcaaatccaagcctccgttctaggagcggcagccggctccccg
ttccggagtcagatggacaccttccagctggagtcggcggtggagctgctcatcgccacc
atcaaggacaacatcaatggtgacatgcagtccaagctgtttggagaacagctgctgcac
atgaccttggagttcgtgaatcatctgatgcgcaatgcgacgtcacaggcacaggtacag
gaagaagagacagggagtgttgatgaagatttgaagaactccatagataaagtgatcaaa
tacctcagtgaacttagaaaatatcaaaaagatgtacccgaacagttaggccagaaagtg
acatctaaacaagatgttcaagtggagaaaagtgaagactttcaatattacatgcctgac
aaaagcaactttacagacagacgccttgagagttggaaacatatgacaagacaggagatt
atccaggatggaattctgaacagctgtattccattagtgcaggctcatcttcacagacac
gacaagacaacagtgcgtagtcagcctagtcgactcaaagacatcctcgatgctggcttg
tctgaagtgtatcagttccttcttcagagaaatttaagaacatcggccaagatgctgaat
aatatgggctttgatgtgacagagcaactcagaagactctgtctgtacacatcaaacaga
acactccgggacttcttgattgaagaacttgaaaaatccaagcaactgacggaagaggaa
ctgaaaatggtacagtttgttcagaagctagagagactgtacacctgtaggtcctatgaa
agggccaaggaaatggcagaggagacaagaaaaagttactgggaaaacactcataggtta
tctcgcacacccacaatgcaagccaagtcaattctgagctcattgatcaagacgggtgac
ttggaacccagtgatccaatgaactatgacagcgatggctattctcatgtcatcctggaa
tgggtcaggacttgggatgaagaaaccaaacaacgcatacttctagacagagtcttccat
agcaatgattcaagtttgttaaccacctttgaccccaagacaagatggcagtacctattg
tctcataacttatgggataaaatctgtcagtggataaatgaagattcttcagaaatcact
gcagagatgttaaatgatatgtcacattgtacgacctatgtgaaggatagagtacttgat
gaaatggcaaggagaggcctgttttcgtcagaggaactggcaagttttgagaagctgcta
cacagacttagtagaagtggcagtttaatggtgaaaccacacaccttgagtaaaagcaca
atactaagtgttgatgatttcaacgccaaattcattggtttctgtctccaacattgcctg
ccaaatgttctctacttttacctagatttcttcagaattgcagtaacttctgaggagacg
cagcaacttctatcagcttacggagacgtcccttggtttgaaatgttactctttttcaga
gaagtagggatgaaatataaagatcccactgcaatgttctgtgccagcctagccaacagt
agacttttacagaactcaccgagaacagtgtctgctctgctagaagccaacagacctctt
gctgccatggcaacactggtctatgctccaggcacactgaatgaggtgactttaccagtt
gagaatgaaaaagacagactttggaaagtgaatccagagttactacagaagtcactgcta
gcttatcctaaattacagtcagcactgtttccagtacagacagctgatggtgtggtggcg
caggatatcacaatgtaccagttactcaagggcaattcaccgtttgacccatccagactt
ttcagatggcagtctacaaataacatgtcaacacagaataatggaggagaagatgttgaa
atacctcactttgctcgatctgacttggtcagtaagtatggacacaaggaagtgctacga
tacacctactatcttaggagaggcaggccatcttttgcattcatcacctttgtcaagagt
cttggggacagtgatgccagccaaatcaagaaaagaatgaagcaggcatactggaaagcg
tacatggtcgccctgacgaatttcaccaactccgccatctgtgctgcgtgtacgacattt
tcagagatgctgggtcacgacagtcttgccatcagagtcgacatacagagcagtaatctg
atatattctcatcagaaaaaaatggctgacaagatcacagacaagaaaactaaacaacag
aaagttaaagatactgaagaagatatagtttctgatttcatgtcattgttgagacacaga
agaaattgtgctgaaaaaattcttgctgaactggaaaatgccatagttgaaagtatcaag
aattctgacgaagaaagtaccagcctggaaaccagtcagcaatggtccctggcagtgctg
ttttgtcatttacataaattaccatatacctcagtgtacctccgagaatgtgccgaagat
aatcaatggttgagattcttgtgttttgctcagaattatcagtatccacaaaaacaggtt
ttggaattggttcgtaacttccaagatgccaacatccgtgaacacctgcagcatgcgtgg
aacacttacagtacaccagccatgaaggacagcagcaacagagggaatccgaggaagcca
ggaaatccagagatctcagagctcagtatctga
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