Ptychodera flava: 139122012
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Entry
139122012 CDS
T10724
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115-like isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pfll Ptychodera flava
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pfll04131
]
139122012
04121 Ubiquitin system [BR:
pfll04121
]
139122012
Enzymes [BR:
pfll01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139122012
Membrane trafficking [BR:
pfll04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
139122012
Ubiquitin system [BR:
pfll04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139122012
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
Zn_ribbon_19
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
C1_2
zf-Nse
zf-RING_6
Prok-RING_4
DUF8608
HypA
DZR_2
zf-RING_16
U-box_ZFPL1
FAR1_N
DUF7560
Ima1_N
DUF5423
zinc_ribbon_16
DZR
KDM6_GATAL
VPS18_RING_C
SR-25
Rad50_zn_hook
zf-HC5HC2H
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
139122012
NCBI-ProteinID:
XP_070543454
LinkDB
All DBs
Position
21:complement(31056875..31093724)
Genome browser
AA seq
325 aa
AA seq
DB search
MAEASIHENSDSPQTRFFCHSCAREISPKLPEYTCPRCDTGFIEELSNDITEDGVHNTEQ
DPAAHFAELWSRAFLETFSPPNSHDDGSSSSSSSSSSSSENQDNRETERAERERSRNRAF
PGTRISFRRSNSRNDRARAIDMILQQLLGGLGGAAVFQAGPAGFPIQMLNLHGNPGDYAW
GTGGLDTIITQLLNNLEGTGPPPADKDKIASLPTINVTKEDTENNLDCSVCKEDFVLDEP
VRRLPCKHMFHNDCIVPWLELHNTCPVCRKGIDDEDKTKNSHGSGSGGNNSTGNSGATSP
SSRQTSRNADIFLMELNKRGYGVMV
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcgtcgattcatgagaattcagactcaccacagacgagattcttctgtcat
tcgtgtgcccgagaaataagtccgaaattaccggaatatacatgtccaagatgtgacaca
ggatttatagaagagctgagcaatgacatcacagaagatggtgttcacaacacagaacaa
gacccagccgcacattttgcagagttgtggagtagagcttttctcgagacattttcacct
cccaatagtcatgatgacggtagcagttcctcatcatcatcgtcgtcgtcttctagtgaa
aaccaagataacagagagacggaaagagctgaaagagagagatcgagaaatcgagctttt
cccggaactaggatatcatttcgaaggtcaaattcacggaatgacagggcacgagcaata
gatatgattctccagcagctgctaggtgggctaggaggtgctgcagtctttcaagcaggc
ccggcaggttttcctattcaaatgttgaatctccatggcaaccccggtgattatgcatgg
ggcacaggaggattagatacaattattacgcagctattaaataatctggaaggaacaggg
ccacctcctgcagataaggacaaaatagcttcacttcccacaattaacgttacaaaagaa
gatacagaaaataatttagattgctcagtgtgtaaggaagattttgttctggatgagcct
gtcaggagacttccatgtaaacatatgttccataatgattgcattgttccatggttagaa
ttgcataacacttgtccagtttgtcgtaaaggaattgatgatgaagacaagaccaagaat
tcacatgggagtggttcaggcgggaacaatagcacaggaaacagtggggctacgtcaccg
tcttcacggcaaacaagtcgaaacgcagatattttcctgatggaactgaacaaaagagga
tacggtgtaatggtgtaa
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