Ptychodera flava: 139122096
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Entry
139122096 CDS
T10724
Name
(RefSeq) elongator complex protein 1-like
KO
K11373
elongator complex protein 1
Organism
pfll Ptychodera flava
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfll03016
]
139122096
Transfer RNA biogenesis [BR:
pfll03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
139122096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_THOC3
Beta-prop_WDR35_TULP_N
Beta-prop_EML_2
TPR_GEMI5
Beta-prop_NUP159_NUP214
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
139122096
NCBI-ProteinID:
XP_070543580
LinkDB
All DBs
Position
21:34492556..34527968
Genome browser
AA seq
1330 aa
AA seq
DB search
MRNLELRHSDCISGFSELHNVQCMTIDCDTGQVYAATCKAIVGLDPSLQQLTLQVSLVEE
GYVSEDGTNHVVGIQHLPDQLSVCVATQNGDVLLCDCNTQQLECVGSVESGLTSMTWSPD
QELVVLTTSRDTVIMMTKDFDPIIEVDMHTEDWGEQKPVTVGWGRKETQFHGSIGKAAAR
QKEETADLAKDWDDRNVRASWRGDGQFFAISTIHPQHGYRTIRVWNRECVLQYSSEIING
LEQALAWKPSGSLIASSQRLQHRHDIVFMEKNGLKHGEFTLPFEKMQVKVLEVLWNSDSS
VLAVWLEDLPPDNLSNFKPMSYLQLWTVNNYHWYLKQTLEFSATEEERLVAVQWDPEHVY
RIHIICYGGNYYQHTWSWATHHSNGMWAGDNAYVAVIDGARVLLSPFRSVIIPPPMCAYY
LQLPQPANQVFFGHGQHCNDIGIVLSDSTVMFYHFTTDAKANDCSVHVQAAGGNGFNRTV
STHQLISRQRIMNGGQPLQLNHPLTLSHFTWIKDDTILAVAMDANCADSRLYELQLLQQD
GSESQLVVSSTTAIDGRVYGIHCNVNDSVVVQLIDGTLLRYNTTTSTLTPWTTNNGLQVR
FPQPCVKMNICQFADEEVVLGLTERYRFYVNDREIVSNCTSFAVHDEYVILTTHTHTCRC
INLNNNISSVPKLSDGDTSTLDESVRRVERGSRIVVAVPNDTKVILQMPRGNLETIHPRA
LMLSAVRKYLDALQYKDALIAMRKHRIDMNLIYDHDPKGFLENVDKFVSQLDDTNHINLF
LADLKAEDMTCTLYKDAYPKTRQSSIKLNEKVDTVCDGVRQALLEINPSKYFQSIITTHI
KKTKPELEIALNKIKSLRDDVNTNRVVTADEALKYIICMVDVNELYNVALGTYDFDLVLM
VAEKSQMDPKEYLPFLNKLRKLESSYQKYTIDKHLKRYSKALVHISQCTDHWQECLELIE
AHQLYVQALKLFKIGTLQYQRVGLMYAEHLLGLHRLEEAGLMYMKCNQDEKALEMYKKCG
NWRQAMCLAIKMNYNEEQISQMASQLASFLHSHRQFTEAAYLLEYYVHDVEEAAVTLIEG
CLWEEALFLMYRHNRLDLVETNLKPAILQGYNTYTSQLESLTPQFERYKHRLSVVRETKE
KRRQGLFDEDGVADKDGDLFSDTSSIGRSSYSQYTASNSRISGRSSKNRRKTERKKYSLK
EGSEFEDLALLEAISGLMTKVDQLKGDMGTLIRVLVQYNYDTEAHELQMILEKTIQMMEK
SVTEIWKPEMDVESSVTPILGPKSTANSIAQSMMQSHRFTKTLTTEEMALRIPPKINKDS
KWKLHQLQDS
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatttagagttgcggcacagtgattgcataagtggatttagtgagcttcacaat
gtgcagtgtatgacaattgattgtgatactggacaagtctatgcagcaacttgcaaggca
attgtgggactagatccatccttacaacagctaactttgcaagtgtcacttgttgaagaa
ggatatgtgtctgaagatggtaccaatcatgttgtaggtattcaacacttacctgaccaa
ctatcagtatgtgttgccactcagaatggcgatgtgctactctgtgattgtaacacacaa
cagctggagtgtgtaggcagtgttgagagtggtttaaccagcatgacatggagtcctgat
caggagctcgttgtcttgacaacgtcaagagatacagtgataatgatgacaaaggacttt
gatccgataattgaagtagatatgcatacggaagactggggagaacagaaacctgtgaca
gtgggatggggaagaaaagaaacacagttccatggatccattggaaaggcagcagctaga
cagaaagaagagacagcggatttagccaaagactgggatgatcgtaatgtgcgtgcaagt
tggcgaggggatggtcaattctttgccatctcaacaatacatccacagcatggatatcgt
actatcagggtatggaatcgtgaatgtgttctacaatactccagtgaaatcatcaacgga
ttagaacaggctctggcatggaaaccatcaggtagtttaatagcatccagtcaaagatta
caacaccgacatgatatagtgtttatggaaaagaatggattaaaacatggtgaatttacc
ctgccgtttgaaaagatgcaagtcaaggttttggaagtgttgtggaactcagattccagt
gtgttggcagtctggttagaagatttaccacctgacaatctgtcaaatttcaaaccaatg
tcataccttcagttatggactgtaaataattatcattggtatttgaaacaaacactagaa
tttagtgctacagaagaagaaagattggtagctgtccaatgggatccagaacatgtgtat
cggattcacatcatatgttatggtggaaattattatcagcatacatggtcctgggccaca
caccatagtaatggaatgtgggctggtgataatgcatatgttgcagtaattgatggagct
cgagtcctgctgtcaccatttcgttcagtaatcataccaccaccgatgtgtgcatattac
ttgcagttacctcagcctgcaaatcaggtgttctttggtcatggccagcattgtaatgac
attggcattgtactctcagattctacagtgatgttttaccatttcacaacagatgcaaaa
gccaacgattgcagtgttcatgtacaagctgctggtggcaatggtttcaacaggacagta
tccacacatcaactgatatcaagacaaagaataatgaatggtggccagccattgcagttg
aatcatccattaactttgagtcatttcacatggataaaagacgatacaatacttgctgtt
gccatggatgcaaactgtgcagattctcgcctttatgaacttcaactcctgcagcaagat
ggttctgaaagccaattggtagtgagctcaacaacagccattgatggtagagtgtatggc
atccattgcaatgtgaatgatagtgttgttgtacagctgattgatggaactctgttgaga
tataatactacaacatctactttgactccatggactacaaataatggtttacaagtcaga
tttcctcaaccctgtgtgaaaatgaacatctgtcagtttgctgatgaggaagtggttttg
ggtttaacagaacgatatcgtttctacgtgaatgaccgtgagattgtctccaactgtaca
tcatttgcagtacatgatgaatacgttatattgacaacccatacacatacatgtcgatgt
ataaatcttaataataatatctcctctgttccgaagttatctgatggtgatacatctaca
cttgatgagagtgttcgtcgtgttgagcgtggctctcgaatagttgtagctgtacctaat
gacacaaaggtgattttacaaatgccacggggaaatttggaaactattcatccgagagca
ttaatgctgtctgctgtcaggaaatacctagatgcactgcagtacaaagatgccttgatt
gcaatgagaaaacatcgtatcgatatgaatttaatatatgatcatgatcctaagggattt
ttggagaacgtagataagtttgtaagtcagcttgatgatacaaaccatatcaatctattc
cttgctgatttgaaagctgaagatatgacctgtactttgtataaagatgcatatccaaag
accagacaaagctcaatcaaactgaatgaaaaagttgatacagtctgtgatggcgtcaga
caagctttgctagagattaatccttcaaaatactttcagtcaataatcacaactcacata
aagaaaaccaaaccagaattagaaatagcattgaacaaaattaaatcattacgtgatgat
gtcaacactaatcgtgtagtgactgcagatgaagctttgaaatatatcatttgtatggtt
gatgtcaatgaactttataatgtagctcttggaacatatgattttgatttggttctcatg
gttgctgagaaatcacaaatggatccaaaggaatatctaccatttttgaacaaactaagg
aaactagagagcagttaccagaaatacacaattgataaacatttgaaaagatacagcaag
gctttggtccatattagtcagtgtacggatcattggcaagaatgtcttgagttgatagaa
gctcatcaactctacgtgcaagcacttaaattattcaagattggaactctgcaatatcaa
agagtagggttgatgtatgctgaacatttacttggtctgcatcgtcttgaagaagcagga
ttgatgtacatgaaatgtaatcaagatgagaaagctttagaaatgtacaagaaatgtggt
aactggagacaagccatgtgtctagccatcaagatgaattataatgaggaacagatttca
caaatggcttcacagttagcaagttttctccattctcatagacagttcactgaagctgca
tatttgttagagtattatgtacatgatgttgaagaagcggctgtaacgttgattgaagga
tgtttatgggaggaagcattgttcttgatgtataggcacaaccgactagatctggttgaa
accaatctaaaaccagcaatacttcaaggttacaacacatacacatcacagctagaatca
ctgacaccacagtttgaaagatacaaacacagactgtctgttgtcagggaaactaaagaa
aagcggcggcagggcttatttgatgaagatggagttgctgacaaagatggtgatttgttt
tcagatacaagtagtattggtagatcgtcatacagtcaatacacagccagtaattccagg
atatctgggaggtcatcaaagaatcgtcgcaaaacagaacggaagaaatacagtttgaaa
gaagggagtgagtttgaagatttagctttattagaggcaatatcaggtttgatgacaaaa
gtcgaccagttaaaaggtgatatgggaacattaataagagttcttgttcagtacaattat
gacacagaagcccatgaattacagatgatattagagaaaacaattcaaatgatggaaaaa
tctgtcactgagatttggaaaccagaaatggatgttgaatcatctgtaactccaattcta
ggtcccaagtctacagctaacagcatagcccagtctatgatgcaatcacacaggtttaca
aagactcttactacagaagaaatggcgttgagaataccaccaaagatcaacaaagattcc
aaatggaaactccaccagcttcaggatagctaa
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