Ptychodera flava: 139122723
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Entry
139122723 CDS
T10724
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
pfll Ptychodera flava
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfll03009
]
139122723
03036 Chromosome and associated proteins [BR:
pfll03036
]
139122723
Enzymes [BR:
pfll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139122723
Ribosome biogenesis [BR:
pfll03009
]
Eukaryotic type
Pre-60S particles
Helicases
139122723
Chromosome and associated proteins [BR:
pfll03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
139122723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
AAA_30
RPC5_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
139122723
NCBI-ProteinID:
XP_070544483
LinkDB
All DBs
Position
22:13443728..13455742
Genome browser
AA seq
707 aa
AA seq
DB search
MPAEVSNKMDEDIKDKNLDFDEETNAKKVKKSKKDKDKKQKKEKKEKKDKEKKKKKRKLE
EDCEETPEVKPKKKKVKTESSEESDSSSNQKIKKETNGVESNHDNKVTVSNGNSDSTDDE
QLSQKERDGAFKKFRLTERTVKLLKERGVTYLFPIQAKTFDYVYDGQDVIAQARTGTGKT
LAFALPLIENLQDVEPKGGRPPKVLVMAPTRELAKQVSEDFESVGPYLSTVCIYGGTAYW
PQESAIRRGVDIVVGTPGRILDYVRKNTLNLSQLRHVVLDEVDRMLDMGFAESVEEILAA
AYKLDDYTATNPQTLLFTATLPDWVYKTSQKYMKPNTKRVDLIGQQRLKAATTVEHLAIR
CHYKERAATISDVVQVYSGKYGRCMIFCETKKEANELGVNSNIRVDVQVLHGDIAQNQRE
ITLKGFREGKFRCLVATDVAARGLDIAEVDLVLMCQPPKDLESYIHRSGRTGRAGRTGVS
VCFYKPNEEYLLKLVERRAGIKFKRIGAPQPEDIILSSSNDAIKSLEQVPQSAIDNFRSI
AEKLIEEKGAVEPLAAALAHMSGATEVTSRSLLNSEQGYTTYLFTCQIEMRTASYVWSAI
GNQIPETVRQSIKGMRMCANKKGAVFDLPNDQIEELQQHWVNKWGCSLEQAVSLPELIDN
APPPSRYGNNNFRRGRFGGGSGGRGITRRDKGFGGHSKVKNNNFFRR
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgaagtgtcaaacaagatggacgaagatatcaaggacaaaaatttagacttc
gatgaggaaaccaacgcaaagaaggtaaaaaaatcgaagaaagataaggacaagaaacaa
aagaaagagaagaaagagaagaaagataaagaaaagaagaagaagaaaagaaaacttgaa
gaagactgtgaagaaactcccgaagtcaaacccaaaaagaagaaagtgaaaacagaatct
tcagaggagagtgactcttcaagtaaccagaaaattaagaaagaaacaaatggtgtagag
agtaaccatgacaacaaagttacagtttccaatggcaacagtgacagcacagatgatgaa
cagctatcacagaaggaacgtgatggagcattcaagaagtttagattgacagagaggaca
gtcaagttactcaaagagcgtggtgtgacctatttgttcccaattcaagccaagaccttt
gattacgtctatgatggccaagatgtcatagcacaggccaggacaggtaccggcaagaca
ctggcattcgccctgccgctgatagagaatctacaagacgtagaacccaaaggagggcgc
cctcccaaggtgttggtgatggcaccgacccgtgaactcgcaaagcaggtgtctgaagat
tttgagtctgtcggcccttacttgtcaactgtctgcatatatggtggtacagcctactgg
cctcaggaatctgccataagacgcggtgttgacattgtagttggaactcctggaagaatc
ctggattacgtccggaagaacaccctgaatctaagtcagttgcggcacgttgtactggat
gaagttgaccgtatgttggatatgggttttgccgaaagcgtggaggaaatattagcagct
gcatacaaactagatgactacaccgccaccaatcctcagaccctactgttcactgccact
ctacctgactgggtttacaagacctcccagaagtacatgaaaccaaacaccaaacgagtt
gatttgattggacaacagagattgaaagcagcaaccacggttgagcatttagccatcaga
tgtcactacaaggagagagcggccaccatcagtgacgttgttcaggtctacagtggaaag
tatggccgctgtatgatattctgtgagaccaagaaagaggccaatgagttgggtgtcaat
tcaaatatacgagtcgatgttcaagttctccatggagacattgctcaaaatcaacgagaa
attacacttaagggtttccgtgaaggtaaatttcgatgtttggttgccacggatgttgca
gctaggggtcttgacatcgccgaagttgatctagttttgatgtgtcaaccgccaaaggat
ttggagtcgtacatccatcgttctggtcgtaccggcagagcgggaagaactggtgtttcg
gtttgtttctataaaccaaatgaagagtatcttctcaagctggttgaaagacgtgcagga
ataaaattcaagcgaattggagcaccacaacctgaagacatcatactctcatcttccaat
gatgcaataaaatctctggaacaggtacctcagagtgcgattgataacttcaggagtata
gcagagaaacttatagaagagaaaggtgcagtagagccattagcagccgctcttgctcac
atgtctggtgccacagaggtcacatcaaggtcactactcaactcagaacagggctataca
acctatctattcacctgtcagatagaaatgagaacggcgtcttacgtatggtcagcaatt
ggtaaccaaatcccagagacagtccgacagtctatcaaaggaatgagaatgtgtgccaac
aagaaaggcgcggtctttgaccttcccaatgaccagatagaggagttacagcaacactgg
gtcaacaaatggggctgcagtctggagcaagccgtctccctgccagagctgattgataat
gctccgcctccttccagatatggaaacaataacttccgcagaggtcgttttggcggcggc
agcggtggacgcggaataactcgcagggacaaaggctttggtggacattcaaaagtcaaa
aacaataacttcttcagacgataa
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