Ptychodera flava: 139122882
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Entry
139122882 CDS
T10724
Name
(RefSeq) polycystin-2-like protein 1 isoform X1
KO
K04986
polycystin 2
Organism
pfll Ptychodera flava
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pfll03037
]
139122882
04040 Ion channels [BR:
pfll04040
]
139122882
Cilium and associated proteins [BR:
pfll03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
139122882
Ion channels [BR:
pfll04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
139122882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
EF-hand_1
EF-hand_7
EF-hand_6
Fer4_24
DUF6693
DUF4179
Erf4
Motif
Other DBs
NCBI-GeneID:
139122882
NCBI-ProteinID:
XP_070544811
LinkDB
All DBs
Position
22:18829949..18859558
Genome browser
AA seq
952 aa
AA seq
DB search
MSQTRVSPSNRPTSAGGLSAHDELEMDRIVQEDMGRRSANRPSSAQSRQAWHDNEGMDMD
DGPLDNSFGHGDFPDDDDHVPTAMEGEVYVDGHMRVLDAQTKAKLEEPQGCCSKVGRAIR
SLWRTRQTEDTKADRELHVKTTLRELIIYIIFVVVLCIVTFGMTSSTMYYYTKVMSELFL
DSQFPETKNTYRGMTNMMDWWRFSQGPLLDGLYWEQWYNGENLTDDEQGYIYYENKLLGV
PRIRQLKVRNDSCFVHSDFESEIKQCYDHYSESVEEKNPFGKMNGTAWVYSTEEELDGSG
HWGKLASYGGGGYYEDLTHTKGTSSAKIYDLKDNLWLDRGTRVAFVDFTVYNANINLFCV
VRLVTEFPPTGGAIPSWDFRTVKLLRYVSAFDYFILACEGIFCLFIAYYVVEEILEIKLN
KWSYFKSVWNCLDLLVIGLSLVCIAFSLYRTNAVDKMLISLLEEPDKYADFEYLSYWQNM
YNNMLAVLVFFAWIKVFKYISFNKTMTQLSSTLSRCGKDLMGFSIMFLIVFFAYAQLGYL
IFGTQIDDFKSFGDSIFTLFRIILGDFDFHELEQANRIMGPIFFCTYVFFVFFVLLNMFL
AIINDTYSEVKADIATQKSEFEITDYFKRGYEKMLGKLNFKRDKIVDIQKALAQADVNND
QQLDFDEWRHELKARGHADAEIEAVFAKYDVDGDRVLDAEEQARMASDLQEQKNHLNAQI
DAELRKKEKAELTNEIAEVEEAAATGGRPGTARSKSRVSFNDGSDSEGDDDGGRRGRPAA
GVSYEEFTVLSRRVDRMEHSIGSIVSKIDAVLVKLEAMERAKLKRRETMGKLLDSITEEQ
QAKRAGKSVDGLRPVSAASSFYDDEDERQGHAEDTGKREQMERLVREELERWDSEASITQ
ASGGRSASAASKAQGKSSGSSRPGSASSNRNVTLEDLDPHVPDPSGMTSSNV
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaacgcgtgttagtccgtcaaatcgtccgaccagcgcgggtggactgtcggcg
cacgacgagctggaaatggaccgaattgtgcaagaagatatgggtaggagatcggccaac
agaccgagtagtgcccaatcgaggcaagcctggcacgataatgaaggtatggacatggat
gatggtcccttggacaatagttttggtcatggagacttcccagacgacgatgaccatgta
ccaacagcaatggaaggcgaagtttatgtcgatggccatatgagggtgttggatgcccaa
accaaagcaaaactggaagagccgcagggctgttgcagcaaagttgggcgagcgatcaga
tcactatggagaacaagacagacagaagatacaaaggccgacagagaactgcatgtgaaa
actaccctgagagaacttatcatctacatcatttttgtcgtggttctttgcattgttacg
tttggtatgacaagttccaccatgtactactataccaaggtgatgtccgagctgtttttg
gattcacagttccccgagacgaagaacacataccgcggtatgaccaacatgatggactgg
tggaggttttctcagggtccactgttggatggcttgtactgggaacagtggtacaatggc
gagaacctgactgacgacgagcagggctacatctactatgaaaacaaactgctgggcgta
ccgcgtattcgtcagctgaaggtgcggaacgactcgtgttttgtacactccgacttcgaa
agtgaaatcaagcagtgttacgatcactactctgaaagcgtggaagagaaaaatccgttc
ggcaagatgaacggaacagcgtgggtctattcgacagaggaagagctggatgggtctggt
cactgggggaaactagctagctatggcggcggaggctattacgaggatctgacacacaca
aaggggacttcttctgccaagatatatgacctgaaggataacctctggttggatcgcggg
acacgggtggcgtttgtcgacttcacagtgtacaacgccaatatcaatctattctgtgtg
gtcaggctggtgacggagttcccacccacaggaggtgcgataccatcgtgggatttccgg
actgtcaaactactgcgatatgtttcagcgtttgactacttcattctggcctgtgagggc
atattctgcctcttcatagcgtactatgtcgtggaagagatcctggaaatcaaactgaac
aagtggtcgtacttcaagagtgtgtggaactgccttgacttgctggtcattgggttgtca
ttggtgtgcatagcattcagtttgtaccggacgaatgctgttgataagatgttaataagc
ctgctggaggagccggataagtatgctgactttgagtatctcagctactggcagaatatg
tacaacaacatgctggccgtgttggtcttctttgcttggatcaaggtgttcaagtacatc
agtttcaacaagaccatgacccagctgtcaagcacgctgtctcgttgcggcaaagacttg
atgggcttttccatcatgttcttgatcgtgttctttgcctacgctcagctgggctacctc
atctttggcacccaaattgacgacttcaagtctttcggtgactctatcttcaccctgttc
cgtatcatccttggtgactttgatttccatgagttggagcaggctaacagaatcatgggg
cccattttcttctgtacctatgtgttctttgtgttcttcgttctgctgaacatgttcttg
gccatcatcaacgacacctacagtgaggtcaaagccgatattgccactcagaagagtgaa
tttgagatcactgactacttcaagagagggtatgagaagatgcttggaaagctgaacttc
aaacgagacaagattgttgacatccagaaagctctggcccaggcagatgtgaataatgac
cagcagttggactttgatgagtggaggcatgaactcaaagcgcgtggtcatgctgatgcc
gagattgaggccgtgtttgcaaagtatgatgttgatggtgaccgagttctggatgcggag
gagcaggccagaatggcatctgatttgcaagaacagaagaaccatcttaatgctcaaatt
gatgcagagcttcgtaagaaagagaaggcggaactgaccaatgagatcgctgaagttgag
gaagctgccgccacaggtggtcgcccaggcactgctcgcagcaagagccgcgtctccttc
aacgatggaagtgatagcgagggtgatgatgatggaggccgtcgagggcgccctgctgct
ggagtctcctatgaggagttcactgtattgagtcgccgcgttgatcgcatggagcattcc
attggaagtatcgtatccaagattgatgctgtgttggtaaagctggaagccatggaacgt
gcaaagctgaagcgccgtgagacaatgggtaaactgttggacagcatcactgaggagcaa
caggcaaagcgggctggcaaatccgtcgatggcttaaggccagtttcagccgccagttca
ttttatgatgatgaggatgagcgtcagggacacgctgaggacacagggaaacgcgagcag
atggagcgattggtccgtgaagagctggagcgctgggactctgaggcgtccatcacccag
gccagcggcgggcgatcagccagcgcagccagcaaagctcaagggaagtccagcggcagt
tcccgtccaggaagcgcatcgtccaaccgcaatgtgactctggaagatctagacccccac
gttccagatcccagcggtatgacatcaagcaatgtgtaa
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