Ptychodera flava: 139124577
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Entry
139124577 CDS
T10724
Name
(RefSeq) LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3a-like
KO
K11644
paired amphipathic helix protein Sin3a
Organism
pfll Ptychodera flava
Pathway
pfll04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139124577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pfll03036
]
139124577
Chromosome and associated proteins [BR:
pfll03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
139124577
REST complex
139124577
Heterochromatin formation proteins
Other heterochromatin formation proteins
139124577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Tricorn_C1
Motif
Other DBs
NCBI-GeneID:
139124577
NCBI-ProteinID:
XP_070546809
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Position
23
Genome browser
AA seq
1328 aa
AA seq
DB search
MSTMKRTTLENQENVYPQRRVQGPETFAHRVLAPAPQPVFDGVGENLAGGLQYPAVQGYQ
MAPASQAAGHHGNIHAHHHGAATQAHQQQTVHQAHAQAQVHAAQVQGQQQQFQRLKVEDA
LSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSNLFKGHPDLIVGFNTFL
PPGYKIEVQAGDCTQVNVSIPGQAQPSTITMHPTPPPAQQQQQAPAQQQSQQQQQQQSQQ
HQPSQGPPTQLQSSNAHKDLQTLGLMCQIDPMQHQSSHHNVTPGHSSAAGAGGGSAAGAG
SGPTQPSSGQGFTQSPSQPSHLAQAMASPQHGTQQAGQQVSQPVEFNHAINYVNKIKNRF
QGQPDIYKAFLEILHTYQKEQRNVKESGGTYQPSLSEAEVYAQVAKLFQNQEDLLQEFGQ
FLPDANSAQHAANFVSAFTKDLKQRPSGVPNDHSAAVKKSSMSSKNNNRSSHLKRSSMSG
QSGVPKKKSRSLKDPSLSDSSKHGSLSEFSFFDKVRKALKSQEVYENFLRCLLLFNQEVV
SRSELVLLVTPLLGKFPELFKWFKEFLGYKESDRIEAVAPSKERSSSELATEIDFSSCKR
YGASYRALPXSYSQPKSSGRTALCKEVLNDTWVSFPSWSEDSQFVTSRKTQYEEHVYRCE
DERYELDIVLETNLATIKVLEGVQKKLSRMSSEEATKFRLDNCVGGTSEVIHRKAIQRIY
GDKAPDIIEGLKKNPAVAVPLVLRRLKAKEEEWREAQRGFNKIWRDQNEKYYLKSLDHQG
INFKQSDTKALRSKSIINEIETVFDERQEENNGESSGPHLVYTFNDQSIVEDAAALIIHH
VKRQTAIHKDDKQKIKQLLLHFMPDFMFVPRGELSDEEEEEEMEVDNSQGNSSKKPSKLR
NTLVNGIAEESDNNQTDDVYNLFYVNNHWYLFIRLHQILCERLSKMYHQAIKIAQQEGPS
NKSNKESTAVALRLRPPSELEPRDYYPAFLELVRNLLDGNVESTQYEDQMREMYGIYAYI
SFTMDKVVQSIVRQLQHIVTEDVNINLTDLYLQEKKTGGAGGSLGSQPARASVEGAYQRK
AEQQLADEQNVFKICYYKDGNKLTLELLDTEEDHSDDPVEVEKWSDYVERFVGNENTTPE
LREALSRKPVFLPRNVRRGRQQRAGSDTDSASEDTEKEKKDKTEKGDGKDEKGNDEKEKV
SEDMAGVEMASNMECKFNLNSYKMVYVVNSEDYMYRRSAMKKARESHPMISAKLHQRFRR
WLSGWEERNITEEQQTGCKDWLLGNYEDIKACQTQETHVKTDSLDYCKYVVVYAKEETPV
PTSSSSSS
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgaagcggaccactttggagaaccaggaaaacgtttatccgcagcgccgc
gtgcaaggaccggaaacgtttgctcaccgagtcttggcgccggcgcctcaaccagtgttc
gacggtgttggtgaaaatctggcaggtggacttcagtacccggccgtacagggatatcaa
atggcacctgcgagtcaagcagctggtcaccacggcaacatccatgcccatcaccacggc
gctgccacccaggcacaccaacagcagacggtgcaccaagcacacgcacaggcacaggtt
catgctgcccaagtgcaaggccaacagcagcagtttcaaaggttaaaggtcgaggatgca
ctgtcgtaccttgatcaggtgaagttacagttcggcaaccaaccacaagtctacaatgat
ttcttggacattatgaaggaattcaagtcacagagtattgacacgccaggcgtaatcaac
agagtgtccaacctcttcaagggtcaccctgacctaatcgtcgggttcaacaccttccta
ccgccgggttacaagatagaggtgcaggctggcgactgtacccaggtcaacgtcagcatt
ccgggccaggcccaacccagcaccatcactatgcatcccacgccaccgccggcccagcaa
cagcagcaagcaccagcacagcagcagtcgcagcagcaacaacagcagcagtcgcagcaa
catcagccgtcgcaggggccgcccacacaactgcagtccagcaacgctcataaggactta
cagacgcttgggttgatgtgccagattgaccccatgcaacaccaaagtagccaccacaat
gtgacccccggccatagcagcgcggccggtgctggtggaggcagcgctgccggcgctggc
agtggaccgactcagccgtcgtccggacagggcttcactcagtcgccgtctcaaccatcg
cacctggcgcaggccatggcgtcaccgcaacatggcacccagcaagccggccagcaagtt
agccaaccagtggaattcaaccatgctataaactatgtcaacaaaatcaagaatcgtttc
caaggacaaccggacatctacaaagcattcttggagattcttcacacgtaccagaaggag
cagagaaatgtgaaagagtccggtggtacgtaccaaccgagtctgtcggaagccgaggtg
tacgcacaagtcgccaaacttttccagaaccaggaggatctgttgcaggaatttggacag
tttctgcccgatgcaaacagcgcccagcacgctgccaattttgtgagtgctttcactaag
gatttgaagcagcgtccgtccggcgtaccgaacgatcacagcgccgccgtgaaaaagagc
agcatgtccagtaagaacaacaacagaagctcccacttgaagcgatccagtatgtctggc
cagtccggcgtccccaagaagaaatccagatctttgaaagacccgtcactgtctgactcc
agcaaacacggcagcctcagtgaattttcattctttgataaggtgaggaaggctttgaaa
agtcaagaagtgtacgagaatttcctgcgatgcttgctcctcttcaatcaggaagtggtg
tcgaggtctgagttggttctgcttgtcacaccattgttagggaagttcccagagttattt
aagtggttcaaagaattcctgggatacaaggaatctgacaggatagaagccgtggcacca
tccaaggaaagaagtagcagtgagctggcaactgaaattgatttctcatcgtgtaagcgt
tacggtgccagttacagggccttgcctnagagctacagccaaccgaaaagcagtggtagg
actgctctctgtaaggaagtactcaacgacacctgggtttcgttcccgtcctggtcggaa
gattcgcagtttgtaacatcgcgcaagacacagtatgaagaacacgtttacagatgtgaa
gatgaacgatatgagcttgatatagttttggaaacgaacctggcaaccatcaaggtactt
gaaggcgtgcagaagaagctatctcgcatgtcgtccgaggaggccaccaaattccgtctg
gataactgcgtggggggtacgtcagaggtgatacaccgtaaagccatccagaggatatac
ggagacaaagcccctgatatcattgagggattgaaaaagaacccggcagtagctgtgcct
ttagttctcagaagactgaaagcaaaggaagaggaatggagagaggcacagaggggcttt
aataaaatctggcgagatcaaaacgagaagtattatctgaaatcgctggaccaccaggga
attaattttaaacagagcgataccaaagcgttgaggtctaaaagtattatcaatgaaatt
gaaaccgtctttgatgagagacaagaagaaaacaatggtgaatccagcgggccgcactta
gtctataccttcaatgatcaatctatcgtcgaagacgctgctgcacttatcatccaccac
gtcaaacgacaaacagcaatacacaaagatgacaaacagaagatcaaacagctcctgctg
cactttatgccggatttcatgtttgtaccaagaggtgaactttctgacgaagaagaggaa
gaagaaatggaagtggacaactcacaagggaactctagcaagaaaccgtcaaagcttagg
aatacattggtgaatggtattgctgaggagtcagataataatcaaacggacgatgtatat
aatttattctatgtcaacaatcactggtatctgtttattcgtcttcatcaaatcctgtgt
gagagactgagtaagatgtaccatcaagctatcaagattgcccagcaagaaggaccttcc
aacaaatctaacaaagagagtacagctgtggcgcttagacttaggcctccgagtgaactt
gaacctcgagactactacccggcgtttttagaactagtgaggaatttactggatggcaat
gttgagagcacgcagtatgaagaccagatgagagagatgtacggcatctatgcatacatc
tcatttaccatggataaagttgtccaaagcatcgtcagacagctgcaacacattgtgact
gaagacgtcaacatcaacttgaccgatctgtatctgcaagagaagaagacaggcggtgcg
ggcggcagcctgggaagccagccggccagagccagtgtggagggagcgtaccaacggaag
gctgaacaacaattagctgatgagcagaacgtcttcaaaatctgctattacaaggatgga
aacaagcttacacttgaactacttgacactgaggaagatcacagcgacgatccagtggag
gtggagaagtggtccgactacgtggagagattcgtcggcaacgagaacactacgccggaa
ctccgcgaagctctgtctcggaaaccagtattcttacccaggaatgtgagacgtggtcgt
caacagagggcaggcagtgacacagactccgccagtgaagacactgagaaggagaaaaag
gacaagacggagaaaggagacgggaaagacgaaaaaggcaacgatgaaaaggagaaagtg
agtgaagacatggctggggtggagatggctagcaatatggagtgtaaattcaatctgaat
tcttacaagatggtttatgtggtgaactcggaagattacatgtacaggaggtctgctatg
aagaaagccagagagtcacatccgatgatatcggcaaagcttcatcagcgtttccgccga
tggctgagtgggtgggaggaacgcaatatcacggaagagcagcagaccggctgtaaggac
tggttgctgggcaactacgaggacatcaaagcttgccaaactcaggaaacgcatgtgaaa
acggacagtctggactattgcaaatacgttgtggtttacgccaaggaggaaacgccggta
ccgacctcgtcgtcgtcatcatcgtaa
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