Ptychodera flava: 139124961
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Entry
139124961 CDS
T10724
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-like isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
pfll Ptychodera flava
Pathway
pfll03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139124961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfll03032
]
139124961
03400 DNA repair and recombination proteins [BR:
pfll03400
]
139124961
DNA replication proteins [BR:
pfll03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
139124961
DNA repair and recombination proteins [BR:
pfll03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
139124961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
TopBP1_BRCT0
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
139124961
NCBI-ProteinID:
XP_070547178
LinkDB
All DBs
Position
23
Genome browser
AA seq
1519 aa
AA seq
DB search
MSNILVVFVNLSKGKDCQIKKAFTAVQRANLPCKLVAETDILQQKEKDAYLYVCDPFEGP
AFEHLLKLQCRIVGPQCVLNCMRLSLAIPRSEHPVYNIAMKDVVISCTSIAKSQRQEIHH
LVQWMGGIISRDFTENVTHLVAGEVGSKRYHVAVSLGKPVMLPEWVIQCWNHSKNRYVHA
TDEEFAAYQCPVFKGCVICVTGLESDKRRDVSLLTQEHGGTYSGELRQNKCTHLVVDEPK
GQKYEFAKKWKIHCVTSKWFYDSLEKGVCLDENLYAVEDNVRIEQGKFVRPTSTPKRKSR
QQTLSSIGDVSNISMASAINDTIMSVDLQTPSHENLFLDGCKIFLCGFTMAEVDRLQRII
NLGGGSRFNQLKDSVSHVVMGTKDDNIIKMIQDSESRPYFLTAQWLVDSYTSGEKMEEQM
YEYMTLTSVVEEDHGNTESLPKAKTKQRNSSVRESRVGVAVSHKEQEEDGDEDITLMEQY
LPQNATVEIGNSCAGKNKSQEVDADETADNVAMEAEDADVTMELAANDADVAMEPSGNDV
DVAMEPEDGNENQEDEEADETNVEGNNKVNQIFYGKTFIIVGFPDEQMDTAVEMITSHGG
TFKPDKVNKMADFAIVPLIGCYDNVEAKAVINNCWLLMCIENECLIDCESNELFLPIDIP
DDCKPLQNCVISISQFTGTERDCIQHLAEYLGAIVQDYFVRKANKGALANTHLILQEPSG
SKYTGAVKWGLPAVDKRWLLECARQRQKVPEESYIIGNTRGEAEKTARIQTENQNRNNNR
NEMRTSLPNEQVEQKSDGASNDVDRIKSITAKSDKEENTTVNNAMESKSNKQKNTAAPVH
NAVPSTSGMDASFLSKKGYQPSFDFSDALAYLETPPSQRVKGSQRRRKSSLPLDVMFSNQ
MQKAVGRTIHSTASSIQTGQQQDNDEEEEVFHKQDEQGVLNGVIICVSKKVSKQQSEYNN
LAESLGAEYIWTYDKTCTHFIYKGRNNDNSKEYKLAKEQGKYIVSPLWLKACQDENKHVD
ESLYPHTYNPKMSLTVSKKRRLTRASTRVQSNVGSSSDEEDECKTMATKDEEEVKETRDE
DKEVEEEMPHTLEIQQDFKRQFEELKTTAMTNKSAKRKSRRLNNSSNTSNSGVHAQDQDH
GNTDSASKTRSSRLQSSKNTFSDLPPEASQTLQITWDDPTGREERLKIMEKLQGGNSCHG
DEDGEDDEEDGEGQDEEESHPQRATEDDEHNVSSTPEAPPVRLPSARPAVALAPEERKYK
PPHKPRFLLSSMTQQEKIDYSGLIEELGGTVSETQYYDSTCTHVVVGTPTRNEKYLAALA
SGKWVLHKSYLEACRQAEEFVQEDEHEWGSGTDLTKLSAQTVKLALAATRWRQQLQEARQ
NTDYNLQVGAFEGWKVLLCVDVNREAGFKRLLEAGAAQVLCSRPPFSNVENATHAFLEIN
KIRKSPDLNVDIRGMAESNVLCLKPEYIAEYLMSESEPDADRYIIAEAKAFYQCAEPSTP
MKRKSCMSETPGSKRSRRH
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatatactggttgtatttgtgaatctatcaaaaggcaaagattgccagattaag
aaggcatttacagctgtacagcgcgccaacctaccatgcaagctggtggctgaaaccgat
atcttgcaacaaaaggaaaaggatgcgtacctctatgtatgtgatccctttgaaggccca
gcttttgaacatttgttgaaacttcaatgcaggattgttggtccccagtgtgtcttgaat
tgcatgagacttagtctggccattccgagatcagagcatcctgtgtacaacattgctatg
aaagatgtggtcatcagttgtacaagcatagccaagtcacaaaggcaagaaattcatcat
ctagtgcaatggatgggaggaatcatctcacgagatttcactgagaatgtcacacatcta
gtagcaggagaagtcggctcaaaaagataccatgttgcagtgagtctcggtaaaccagtc
atgctgccagagtgggtaattcaatgctggaaccacagcaaaaacagatatgtccatgcc
acagatgaggagtttgctgcctatcagtgtcctgtattcaaaggctgtgtaatatgtgtg
actggcttggagagtgataaacgacgggatgtcagtctcttgactcaagaacacggtgga
acatactccggtgaactcagacaaaataaatgtactcatcttgtggttgacgagcccaaa
ggtcaaaagtatgaatttgccaaaaaatggaaaatacattgtgttacctcaaagtggttt
tacgacagtctagaaaagggagtgtgtcttgatgagaacctttatgctgtggaagacaat
gtgagaattgagcaaggaaaatttgtgaggccaacatcgacaccaaagaggaaatcaagg
cagcaaacattgagcagcattggtgatgtgagtaacatcagtatggcctcggccatcaat
gataccatcatgtctgtagacctacagactccatctcatgaaaatttgttcctagatgga
tgcaagatattcctgtgtggtttcaccatggcagaggttgacaggttgcaaagaatcatc
aacttagggggtggttctcgattcaaccaattaaaggacagcgtcagtcatgttgtcatg
ggaacaaaagatgataacatcatcaaaatgatccaagattcagaatcaaggccatatttc
ctaactgctcagtggctggttgacagttatacttctggcgaaaaaatggaagaacaaatg
tatgaatatatgacactaacaagtgttgtagaggaagaccatggaaacactgagagttta
ccaaaggctaaaaccaaacagaggaatagcagtgtcagagaaagtcgggttggtgtggct
gttagtcataaagaacaggaggaagatggtgatgaagatataactctgatggaacagtat
ctaccccagaatgccacagttgaaataggtaactcatgtgctggaaaaaacaaaagccaa
gaagttgatgctgatgaaactgcagataatgttgccatggaagcagaggatgcagatgtt
accatggagctagccgccaatgatgctgatgttgctatggagccaagtggcaatgatgta
gatgttgccatggagcctgaggatggaaatgaaaatcaagaggatgaagaggcagatgag
acaaatgttgagggaaataataaagtgaatcaaatcttctatggaaagacttttatcatt
gttgggtttccagatgaacagatggacactgctgtagaaatgatcacttcacatggagga
acattcaaaccagacaaagtcaacaaaatggcagattttgcaattgtccctcttattggt
tgctatgacaatgtagaagccaaagctgtaatcaacaactgttggcttttgatgtgtatt
gagaatgaatgcctgatagactgtgaaagcaatgaactgtttttaccaattgacatccca
gatgattgtaaaccgttacagaattgtgtaatttcaatcagtcaattcactggtacagaa
agagactgcatacaacacttagctgaatacctgggtgccattgtgcaggactactttgta
cgcaaagccaacaaaggtgccttggctaacacacatcttatattgcaagaaccatcaggt
agcaagtatacaggtgctgtgaaatggggacttccagctgttgacaaaaggtggttactg
gagtgtgcaagacagagacagaaagttccagaagagagttacatcatcggcaataccagg
ggagaagcagaaaagactgccaggatacagacagagaatcagaacaggaataacaatagg
aatgaaatgaggactagtctgcctaatgaacaagtagaacaaaaatcagatggtgcaagc
aatgatgtggacaggataaaatctataactgctaaatctgataaagaggaaaataccact
gttaataatgccatggaaagcaaatctaataaacagaaaaacactgctgcaccggtgcat
aatgctgtgccaagcacaagtggaatggatgcgtcatttctctcaaagaaaggatatcag
ccatcgtttgatttctctgatgccctggcgtatctggaaactccaccaagtcaaagagtc
aaaggaagtcagaggagacgaaaatcaagtctaccccttgatgtaatgttctcaaatcag
atgcagaaagctgttggcaggaccattcatagtacagcaagcagtatccaaactggtcaa
cagcaggacaacgatgaggaagaagaggtatttcataaacaggatgagcagggtgtgttg
aatggtgtcatcatttgtgtcagtaagaaagtcagcaaacaacagagtgaatacaacaac
ctggctgagtctctgggagcagaatatatatggacatatgacaagacatgcactcatttt
atctataagggaagaaacaatgacaatagcaaagaatacaagctggccaaggagcaagga
aaatacattgttagtccactctggctaaaagcatgccaggatgaaaacaagcatgttgat
gagtccctgtatccacacacttacaatccaaagatgagtctgactgtgagtaaaaagaga
cgtttaaccagagccagtaccagagtccagtccaatgttggcagcagtagtgatgaggag
gatgaatgtaaaaccatggcgacaaaagatgaagaagaagtgaaagagaccagagatgaa
gataaagaagttgaagaagagatgccgcacactctggaaatacaacaagattttaaaaga
caatttgaagaacttaagacaactgccatgacaaacaagagtgccaagaggaaaagcaga
agactaaacaacagcagcaatacaagcaatagcggtgtccatgcacaggaccaggaccat
ggcaatactgacagtgcctccaagacaagatcttcacggttacagtcttccaaaaacaca
ttcagtgacctaccaccagaagcgtcacaaacattacagataacatgggatgaccctaca
ggacgggaagagaggttgaaaattatggagaaattacagggtggaaacagttgccatgga
gatgaggatggagaggatgatgaagaggatggtgaaggccaggatgaggaagaaagtcat
ccacagagagctactgaggatgatgaacataatgtatcctcaacaccagaggcaccacct
gttagactgccctcagccagaccagcagtggccctggcaccggaggagagaaagtacaaa
ccaccacacaagccaaggtttctgctgtcctcaatgacacagcaggaaaagattgactac
agtggattaattgaagagttagggggtactgtcagtgagacccagtattatgacagtacg
tgtacacatgttgtagttggtaccccgactcgtaatgagaaatacctggcagctttggca
tctggtaaatgggtcttgcataaatcttatcttgaagcatgcagacaagcggaagaattt
gtacaggaggatgagcatgaatggggcagtggaactgacttgacaaagttatcagcacag
actgtcaagttggcattggctgcaacaagatggcgacaacagttacaggaagccagacag
aatacagattataacctacaagttggtgcatttgaaggatggaaggtattgctgtgtgtt
gatgtgaacagagaggctgggtttaaaaggttactagaggctggtgctgcccaagtactg
tgttctaggccaccattcagtaatgtggaaaatgctacacatgcattccttgagatcaac
aaaatcagaaaatctccagatttgaatgttgacatcagagggatggcagaaagtaatgtt
ctgtgtctgaaacctgaatacatagctgagtatctgatgtctgaatctgaacctgatgcc
gacagatacatcatagcagaagccaaggcattctaccagtgtgcagaaccttccactcca
atgaagaggaagtcatgtatgagtgaaacaccagggtctaaaagaagcagaagacactag
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integrated database retrieval system
