Ptychodera flava: 139129591
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Entry
139129591 CDS
T10724
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
pfll Ptychodera flava
Pathway
pfll04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139129591
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pfll04515
]
139129591
Cell adhesion molecules [BR:
pfll04515
]
Immunoglobulin superfamily
ROBO family
139129591
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
Sp38
Pur_ac_phosph_N
Ig_J_second
DUF6550
Motif
Other DBs
NCBI-GeneID:
139129591
NCBI-ProteinID:
XP_070551337
LinkDB
All DBs
Position
3:complement(13261114..13626077)
Genome browser
AA seq
1728 aa
AA seq
DB search
MYCTVMKAVVEGLKGHNNRDNCFSVPNEGENIISKSECNQARFRCSQCGRHHLAAMARQR
KHLKKPSDYRKFSTNVNGSTQHAMELTTRICYLALIVVCLSVFPVLCQVAEARRHQDDFA
PRITEDPTDIVVPKAEPATLNCKAEGQPRPTIQWLKDGQPVETIADDPKSHRTLLPSGSL
FFLRIIHGRNSKPDAGVYQCVATNYLGTTYSRNATLEVAILKEEFREEPTDVVAATGDSA
MLNCLPPRGYPEPTASWEKDGNLIEPSDRIQVSLEGHLMFAQVRREDAGQYVCIGSNVVG
EKRSREATLTVREKPTFIVSPQDITAVVNDNIEFYCTAAGDPVPTVTWSKKDGELPAGRY
QILDDNTLKLRHVTVLDEGSYICTGENSVGASHTEAKLSIHAEPAFSVVPRDRVVAVNRI
ATFDCRASGSPKPAIFWQRDGDQDLLFSGQVAGRFAVTQEGQLQITDVQREDEGFYTCSA
LSVAGTVEVKAKLTVIVMTDRPPPIIRQGPSNQTLAVSSVAMLPCVAAGNPPPTVRWQKD
NSLISSSNPRISLSDPGTLQITDLRLSDTGLYTCIASSESGETIWSAGLTVVDLSEPTMV
VIHRTPEPSTFPGQPSKPEIQNVTRTSVWLTWRPNGNSGASSVIRYIVEYYSRDVGSGWT
VVSRNVRAESFVVRQLRPATTYIFLVRAVNSHGVSLPSAVSQEVTTKESGGGISIPEAPI
EVQRKLNSVAVTVTEVDVDSPFRITAYWMVEQQPNSVFDGFVVKCQATQRGSENIIKRVS
DKKKRHLSVDGLRPLTEYSVIVLPYKEDGRVGATVNYEGVPSRAKKVKMPTAPPIAAPRD
VTAKSNGSEAIKIQWKPPPKEPQYGIIIGYQVWCLDNSTGNHVNKTTDNTTLAITLGDLS
PGMLYAIQVAAFTAATGLGTPSRKQFVQLDPIVSNMPHSVSLGDKIKSIVTNPKFIGPVG
SVIWLALLIFCYFLYRRRKLKPPLLYDSIKLDNVNRQAGDTSTMSTSRNCTMNQDTNTTW
MEQSWQQNAAAHYKTLTSQACCYPNGTAMGQSYPPNMLDGDGMIKENNIMPNDSTTNVFM
TPDMITHNNIPEYAEVSSIPREMINPLDHKSLNVSGKEHNITQPYASTTLVMPPNIKDNL
DKNYTGNNLDKPWLQPPYYNSKKRHDKMIEAENSGSSSCTLPSHLRMNDSCATSPVSDSG
SYTQDSGGSGRRKKKVKSHKQPALNWADLLPPPPEHPPPPTDIDSPPDSPQYHVLGSPIP
SQQSVKSSQGYQTDQQDESASIAASHRSHGSGGGRQYMHGGGNQGGHMPGIRRPQDYPMG
PGMMMGGSLRKDQVNSPDNMRDMPMHSLNKKQRNMPPHGGHAGPHRELRHNPEYREIAVC
NSVGLQNCESAIETDYTDNEDYPQDEHLIPMLPARLEDTPHGPGLSIDLPNSANMHNDQM
MFSEISDAETSVKDEELDGDTESNCTGSMMASWASLDGSSGTSARCSAVSDSSDGSFFTD
ADFASAVAAAAESAGLKVEGTKVIDPNAGQRRMPVAQKGGHSPANPVTDNDSHVNGRPNK
PKYSHKNKHPQIQQQQKPEAQHTNQALRNEQLNRNKPAKPAKPEKPEKPEKLNDRKGSHK
KSQKSRQESEKQKLQRQHELQHELPQDDNIESDEVIPYSKPSFPSTSSSDTSSRGSTGRR
KQERPYNPPILNDANDGVYYLQDTNDMGLRVTANPMAFEHDENNHFKA
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atgtattgcacagtgatgaaagcagtggtggagggcttgaaaggacacaacaatagggat
aattgtttttccgtgccaaatgaaggagaaaacatcattagtaagagtgagtgtaatcaa
gccaggtttaggtgttcacagtgcggacggcaccaccttgcagccatggctcgtcaaaga
aaacacctgaaaaagccatcggattatcgcaagttttccacaaatgtgaatggaagtacg
cagcatgccatggaattaaccacacggatatgttatcttgccttgattgtggtttgcctc
agtgtctttcccgtgctgtgccaagttgccgaggctagaagacaccaagatgactttgct
cctcggatcacagaagacccaaccgatatcgtggtgcccaaggcagaaccggcaactctc
aactgcaaggcagagggtcagccaagacccaccatacagtggttaaaggatggtcagcca
gtagaaaccatcgcagatgatccgaaaagccaccgaactcttcttcccagcggatccctg
tttttcctcaggataatccacggaagaaacagtaaaccggatgctggagtgtaccagtgt
gttgctacgaattatttgggaacaacctacagtcgcaatgccactctagaagttgcaatt
ttgaaagaagagtttcgagaagagcccacggatgttgtcgcggcaactggagattctgca
atgttgaactgcctcccgccgagggggtatccggaacccacggcatcatgggaaaaagat
ggcaacctgatcgaaccaagtgacagaattcaagtatcgctcgaaggacacctaatgttt
gcacaggtgagacgtgaagatgctggccagtatgtgtgcatcggtagcaatgtggttgga
gaaaagagaagcagagaagcaacactgactgttagagagaaaccaacattcattgtatca
cctcaagacataacagcggtggtcaacgataatattgagttttactgcacagcggccggt
gatccggtacccacggtgacttggagtaagaaagatggtgaactgcctgccggaagatac
caaattttagatgacaacactctgaaactgagacacgtcactgtcttggatgaaggttcc
tatatctgtactggtgaaaacagcgtaggggcaagtcacactgaagccaaacttagtatt
catgctgaacctgctttttccgttgtgccgagggacagagttgtcgcagtcaacagaata
gctacgtttgactgcagagcatcagggagccccaaaccagcaatattctggcaaagagac
ggtgaccaggatcttctatttagcggccaggttgccggccgttttgccgtcacacaggaa
gggcagcttcagataacagatgtacagagagaagacgaggggttctacacctgttcagct
ctcagtgttgctgggacggtggaagtcaaagctaaactcaccgtcatagtcatgacagac
cgaccgccgccaatcatacggcaaggaccgtccaatcagacgttagccgtcagcagtgtg
gccatgttgccgtgtgtcgctgccggaaatccaccacctaccgtaaggtggcagaaggac
aactcgctcatctcatcaagtaatccaagaatatcgctgtcagatccaggcaccctgcag
atcactgatctgcgtctatcagacactgggctctacacttgcatcgcgtccagtgagagc
ggggagacaatctggagtgctggactcactgttgtcgacctcagtgagccaactatggtg
gtcattcatcggacaccggagccatctacgtttccaggacaaccatccaagccagagata
cagaacgtgaccagaacgtccgtctggttgacgtggcgaccgaacggcaacagtggtgcc
tcgtctgtcattcgttacatcgtggaatattacagcagagatgttggttcaggttggact
gttgtttctaggaatgtacgggcagaaagtttcgtcgtacgccagttgcgaccagctact
acttatattttccttgtgcgagcagtcaactctcacggagtgagcttacccagtgcagtc
tcacaggaagtgacaacgaaagaatcaggtggaggcatttcaataccggaagcaccgatc
gaagtccagagaaaattaaacagcgtagccgtgacggtcacagaggttgatgtggacagc
cccttcagaattaccgcctactggatggtcgagcaacagccgaatagtgtgtttgatggc
tttgtagtgaaatgccaagccacacagaggggctccgagaacatcatcaaaagggtgtcc
gacaaaaagaagaggcacctgtcagtagacgggctgaggccactgacggaatactccgtc
attgtgcttccatacaaggaagacggcagggttggagcgacagtcaattacgaaggtgtc
cccagcagagccaaaaaagtgaaaatgcccactgcacctccgatagctgcccctagggat
gtgaccgctaaaagtaacggcagtgaagccattaaaatacagtggaaaccaccccctaaa
gaacctcaatatggaattatcattggctaccaggtttggtgtcttgacaacagtactggt
aaccatgtcaacaagacaacggacaacaccacgttggccatcacactcggtgacctcagc
cccggtatgctgtatgccatccaagtggcggcattcaccgcggcaacggggcttggaacc
cctagtcgcaagcagtttgtgcagctagatcctattgtatctaacatgccgcattcagta
agcctgggcgacaagatcaaaagcattgtgacaaatcccaagttcatcggtccagtgggc
agtgtcatatggctggctctcttgatcttctgctacttcttgtacaggagaagaaaattg
aaacctcccctcctgtacgacagcatcaagctagacaatgtaaacagacaggcaggggat
acatcaacaatgtctacaagtagaaactgtaccatgaatcaagacaccaataccacatgg
atggaacagagctggcaacaaaatgcggcagcacattacaaaacattgacttctcaagct
tgctgctatccaaatggcacagctatgggtcagagctatccgccaaacatgctggatggt
gatggaatgataaaggaaaataacattatgccgaacgacagcaccaccaacgtcttcatg
acaccagacatgataacgcataacaacattccagagtatgccgaggtcagttcaatacca
cgagagatgatcaacccattggaccacaagagtctaaacgtcagtggcaaagaacacaac
ataactcagccgtacgcgtccacaacgctcgtcatgcctcccaatatcaaggataacttg
gacaagaattacaccggaaataatctggataagccgtggcttcaaccaccctactataac
agtaagaaacgacatgataaaatgatcgaggctgaaaattccggatcgagttcctgcacc
ctgccgtctcatctcaggatgaatgattcatgtgcaactagtccagttagcgactcggga
agctatacacaagattctggcggaagtggacgaagaaagaagaaggtgaagagccacaag
cagccagcactgaactgggcagatttgcttccgccacctccggaacatccgccaccgccg
acagatattgacagtcccccggattctccccaatatcacgttttgggatcaccgattccg
tcgcagcaaagcgttaagtcgtcgcaaggataccagactgaccagcaggatgagagcgcg
tccattgcggcatcgcatagatcacatggatcgggaggaggcaggcaatatatgcacggc
ggtggtaatcaaggcggtcatatgcccggaatacgcagaccacaggattatcccatggga
cccggaatgatgatgggcggatccctgcgtaaggatcaggtgaacagccccgataacatg
cgagatatgcccatgcatagcctgaacaaaaaacagaggaacatgccaccccatggcggc
cacgcaggacctcacagggaactgagacacaacccggaataccgggaaatcgctgtgtgc
aattccgtaggactgcagaactgtgaatcggccattgaaactgattacacggataacgaa
gattatccgcaggatgagcacctgattccgatgctaccggcgagactggaagatacgccc
cacggcccgggactcagtatagatctgccaaactcagctaatatgcacaatgatcagatg
atgttctccgagatctctgatgcagagacgtcagtgaaagatgaagaattagacggagat
actgagagtaactgtacagggtccatgatggcatcatgggcctcattagatggtagtagc
ggtacaagtgccagatgtagcgccgtcagtgacagctctgatggctcatttttcacagat
gctgactttgccagtgctgtggccgccgctgccgagagtgccggactcaaagtggagggc
accaaggtcatcgaccccaatgcaggccagaggaggatgcctgtcgcccagaaaggaggg
cacagtcctgccaatcctgtgacggacaacgacagtcacgtcaacggcagacccaacaaa
ccaaaatattcacacaaaaataaacatccgcaaatacagcagcagcagaaaccagaggct
caacatacaaatcaagcgctgagaaatgaacaactcaatcgtaacaaacctgccaagccg
gccaaaccggagaagccagaaaaaccggaaaaattgaacgaccgcaaaggcagccataaa
aaatcgcaaaaatcgcggcaagagagcgaaaaacaaaaattgcagagacaacacgaactg
caacatgaactgccacaagacgataacatagaaagtgatgaagttatcccttatagcaaa
cccagtttcccgtcaacgtcatcgagcgatacctcgtcgcgaggttcaacagggcgaagg
aaacaagagcgtccatacaatcccccgattctcaacgatgccaatgacggtgtatattac
ttacaggatacgaatgatatgggactacgggtgactgccaatcctatggcatttgaacac
gatgagaacaatcacttcaaggcatga
DBGET
integrated database retrieval system
