Ptychodera flava: 139130362
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Entry
139130362 CDS
T10724
Name
(RefSeq) nuclear pore complex protein Nup54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
pfll Ptychodera flava
Pathway
pfll03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139130362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfll03019
]
139130362
Messenger RNA biogenesis [BR:
pfll03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139130362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Vps52_CC
LmeA
Motif
Other DBs
NCBI-GeneID:
139130362
NCBI-ProteinID:
XP_070552255
LinkDB
All DBs
Position
4:complement(33525005..33537752)
Genome browser
AA seq
555 aa
AA seq
DB search
MSFSFGTASFGTPATGTASATPAFGFGATTTTTGTTGFGGFGATKTTAPSLFGGLGTSTT
TTSAAFPFGGTASTAPTTSTFTFPSSSTGFGTGLGGGLTGGLGGLGTGGLTGTGGLGTTG
LGTGLGTAGTGLGTGLGAATGLGTGLGVGGTGFGTGFGTGLAGNNQANVLVNTASALHLP
VIYGDERDVLIAKWNQIQAFWGTGKGYYTQNASVNFTPDNPFCRFKTVGYSCKPTSKNED
GLVALVIKRKASEIKQQQQQLVDSLFRILGSKPTLSVCVEGVRALPDDKTEVLIYVQERL
PTGATKRVTATDLNNFLNQATSKTQLTSLGVENTVAKTELTDAQLKQYLDNPPSGYDPRL
WRQAKLDNPNPESMIPVPMVGFSELNSRFKHQEHQNKQHQGRLNIISDDIATLQRNQATI
QAKLTEYKRKHAELSHKILQIMLAQEVYRKSGLAIQVEEEQLRVQLESIQAELNAPTQFK
GRLNEMMSQIRMQSQASAARNEARYSIDLALQEEIKQHLKQQQEGIRHLINVIKDDVEDL
QLVENGLSDIIHQRR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttcatttggaactgcgtcattcgggacaccagcgaccggaacagcttctgca
actccagcatttggctttggggcaacaactacaactacagggaccactggctttggtggt
tttggtgccaccaagacaactgctccatcattgtttggtggtttaggcacttcaactacc
actacttcagcagcatttccatttggtggcactgcaagtacagctccaaccacctcaacg
ttcacattcccttcatctagtactggatttggcactggcctgggaggtggtttaacaggt
ggcttagggggccttggcactggaggcttgactggtactggtggactaggaaccactggc
cttggtactggcttaggtacagctggcactggtcttggtacaggtttaggcgctgctact
ggcctcggcactggtttaggcgtcggcggcactggtttcggtacaggcttcggcactgga
cttgcaggaaacaaccaagccaatgtactggtgaatacagccagcgctctccacctacct
gtgatttacggagatgagagagacgtactcattgccaaatggaatcaaatacaggctttc
tggggaactggtaaaggatattacacccagaatgcatcagtaaacttcacacccgataat
ccattctgcaggttcaagactgtgggttacagctgtaaaccaacatcgaagaatgaagac
ggcctggtggcgctagtgatcaaaaggaaagcaagtgaaatcaaacagcaacagcagcag
ctggtggatagcctgttcagaatactgggcagcaaacccactctgtctgtttgtgttgaa
ggtgtgagggcactgcctgatgacaagactgaggtactcatctatgtacaagagagattg
ccgacaggagcaaccaaacgagtcactgccacagacttgaataactttctgaatcaggcc
acaagcaaaactcaactcacatccctgggagtggagaacacggttgccaagacagagcta
acagatgcacagctgaaacagtatctagacaatccaccctccggttatgatccaaggcta
tggagacaagccaaacttgacaatccaaatcctgaaagcatgataccagttccaatggtt
ggcttcagtgaattgaacagcagattcaaacaccaggaacaccaaaacaagcaacatcaa
ggcagactcaatataatttcagatgacatcgccaccctgcagaggaaccaggcaaccatc
caagccaagcttactgagtacaagaggaagcatgctgaattatcacataaaatcttacag
atcatgctggcacaggaagtatacaggaagagtggcctggccattcaagttgaagaggaa
cagttgagagtacagcttgaatccatccaggcagaactcaatgctccaacacagttcaag
ggacgtctcaatgagatgatgtcacagattagaatgcaaagtcaggcgtctgctgccagg
aatgaagcacggtattcaatagatctggcacttcaagaggaaattaaacagcatctgaaa
cagcagcaagaaggtattcgacatcttataaatgtaatcaaggatgatgtggaggatctt
caacttgttgaaaatggactgtctgatattattcatcaaaggagatga
DBGET
integrated database retrieval system
