Ptychodera flava: 139130948
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Entry
139130948 CDS
T10724
Name
(RefSeq) LOW QUALITY PROTEIN: DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
pfll Ptychodera flava
Pathway
pfll03420
Nucleotide excision repair
pfll04120
Ubiquitin mediated proteolysis
Brite
Ubiquitin system [BR:
pfll04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
139130948
DNA repair and recombination proteins [BR:
pfll03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
139130948
TCR (transcription coupled repair) factors
Cul4-CSA complex
139130948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139130948
NCBI-ProteinID:
XP_070552907
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Position
1:complement(14874686..14909928)
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AA seq
1139 aa
AA seq
DB search
MAHNYVVTAHKPTAVNACVTGHFTSSTDLNLIIAKNTRLEIYVVTPEGLRPIKEIGMYGR
IAVMELFRPPGESKDLXFILTQRYNACILEYKQDGDNIEIITKAHGSVQDRIGRPSETGI
IGIIDPECRVIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFVHGCQVPTIAF
VHQDPQGRHLKTYEISLRDKEFTKGPWKQDNVETEASMVIAVPQPFGGVLIIGQESITYH
KGDNYVPVAPPMIKQSAIVCHGRVDSNGCRYLLGDMAGRLFMLLLEKEEMMDGSVNVKDL
KVELLGETAIAECLTYLDNGVVYVGSRLGDSQLVKLNVDPNEHGSYVQVMETFTNLGPIV
DMVVVDLERQGQGQLVTCSGAYKEGSLRIIRNGIGIHEHASIDLPGIKGIWPLRVDVNTE
LDDTLVLTFVGQTRVLKLNGEEVEETELPGFDSDQQTFYCGNVSYGQIVQITPASVRLVS
AETKRMVWEWKPSSGKNISVASCNTRQIVCAVGSELFYLEIHAGEVTQISTATMDHEVAC
LDITPTVEGSDMADLCAVGLWTDISSRILKLPSLDQMHLEMLGGEIIPRSILMTAFEGIH
YLLCALGDGSLFYFQLNTETGYLSDRKKVTLGTQPTVLKTFKSLSTVNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNAEGYPDSLALANDTTLTIGTIDEIQKLHIRTIPLGES
PRRIAYQEQTQTFGVLSTRVECKDGTNTVPSRPSASVSALSTSNASSKIVQSNSGKYGEG
SFGDELEMHSLLVIDQHTFEVLHAHQFMNNEFATSLVSCRLGDDPNIYYIASTAFVYPEE
SEPKSGRIIIFQWHEGKLNQVAEKDIKGAAYTLVEFNGKLLASINSTVRLFEWTADRELR
VECSHFSNIIALFLKIKGDFILVGDLMRSITLLRYKPMEGSFEEIARDYNPNWMSSIEIL
DDDNFLGAENSFNLFTCQKDSAATTDEDRQHLQEVGLFHVGEFINVFRHGSLVMQHPGES
STPTQGSVLYGTVNGSIGLVTQFSEELYNFLSEVQNKLTKVIKSVGKIDHAFWRSFHTER
KTEPAAGFIDGDLIESFLDLSRDKMAEVVQGLQIDDGGMKRDATVDDLVKMIEELTRIH
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggctcacaattatgttgtgaccgctcacaaacccactgcagtcaatgcatgtgtcacc
ggtcatttcacctcctcaacggacttgaacttgatcattgcaaagaacaccagactggag
atctatgtggtcacaccggagggccttcgacctatcaaggagataggaatgtatggacgc
attgcagtcatggagttgttcagaccgccaggtgagagtaaagatttgntgtttatcttg
acacaacgatacaacgcttgcattctggaatacaaacaagatggcgacaacattgaaatt
atcaccaaagcacacggaagtgtccaggatcgcatcggtcgtccatctgaaactggtatt
atcggaatcattgatccagagtgtagagttattggactgagattgtacgatggattgttt
aaagtgatccctctggacagagacaacaaagaattgaaggcttttaatatcagacttgag
gaactccatgtgattgatgtcaaatttgtacacggctgtcaagttccaaccatcgcattt
gtacatcaggacccccaaggacgacatctgaaaacctatgaaatatcacttagagacaaa
gagttcaccaaaggaccgtggaagcaagataatgttgagacagaagccagcatggttatt
gctgtaccacagccatttggcggtgtcctcatcatcggccaggaatccatcacatatcat
aaaggtgacaactatgtaccagtggcaccacccatgatcaagcaaagtgctatagtgtgt
catggccgtgtagactccaacggatgtcgttacttactcggcgacatggcagggagactg
ttcatgcttctcctggagaaagaagaaatgatggatggaagtgtcaatgtcaaggacctc
aaggttgaacttcttggagaaacagccattgcagagtgtctgacatatcttgacaacggt
gtggtctacgttggttccagactcggagattcacagctagtcaagctgaatgttgatccc
aatgaacacggttcttacgtgcaagtgatggagacgtttacaaatctaggaccgatcgtc
gatatggtggttgtagatttggagaggcaggggcagggtcagctggtaacctgttctggt
gcgtataaagaaggatcactgagaatcatccgcaatggaattggtattcatgaacatgcc
agtattgatctacctggtataaaaggtatctggcctctacgagttgacgtcaacactgaa
ctagacgacacattagttttgactttcgtcggtcagacacgtgtgttgaagctgaatggc
gaagaagttgaagagacagagttaccgggctttgatagtgatcagcagacattttactgt
ggtaatgtcagctatggacagattgtacagataacaccagcatccgtgaggttggtgagt
gcagagaccaagagaatggtgtgggaatggaagccatcgtctggtaagaacatcagtgtt
gcatcctgtaacaccagacagatagtctgtgctgtaggaagtgaactcttctaccttgaa
atacacgctggtgaagtcacgcaaatcagcacggcaaccatggaccatgaagtagcctgt
ctcgacatcacaccaactgtagagggcagcgatatggctgacctgtgtgctgtaggtctg
tggacggacatctcgtccagaattctcaaacttcccagtctggaccagatgcatttggaa
atgctcggcggagagataattccccgatccatattgatgacggcatttgagggcattcac
tatctactgtgtgctctcggagatggctccttgttttatttccaacttaacactgaaaca
ggctacttaagtgaccgcaaaaaagtaactcttggcacacagccaacagtcttgaagacc
ttcaagtcactgtccacagtcaatgtgttcgcctgttcggacagaccaacagttatttac
tccagtaatcacaagctggtcttctccaacgtcaacctcaaagaagttaactacatgtgt
ccactgaatgcagaaggatatccagacagtcttgcattagccaatgacaccacgctaacc
atcggtaccatcgacgaaatccaaaagctccacattcgcacaataccgctaggagaatcg
ccgcgccgcatcgcctaccaggaacagacgcagacctttggtgtgttgagtactcgggta
gagtgcaaagacggcacaaacaccgtacccagcaggccaagtgccagcgtcagtgcactg
agtacgtctaacgctagcagcaaaattgtgcagagcaattcggggaagtacggagaaggg
tcattcggagatgagcttgagatgcatagtttacttgtcatagatcaacacacttttgaa
gtgttacatgcacaccagttcatgaataatgaatttgctacaagtctggtgtcctgcaga
ctgggagatgacccaaacatctactacattgccagcacggcatttgtctatccggaagaa
tcagagccaaaaagtggaaggattattatattccagtggcatgaaggaaaacttaaccag
gtagcagagaaagacattaaaggtgccgcttacacgttggttgagttcaatggaaaactg
ttagcaagtatcaacagtactgtgcgattatttgaatggactgctgacagagagctgaga
gttgagtgcagtcactttagcaacatcattgcgctgttcctaaagatcaaaggagacttc
attctggtgggagatctgatgagatccataactctacttaggtacaaaccaatggaagga
agctttgaagagattgcaagagactacaatccaaattggatgtcatcgatagaaatactg
gatgatgataatttccttggtgctgagaattcatttaatctttttacatgtcagaaagac
agcgcggcaaccacagatgaagacaggcagcatcttcaagaagtgggattatttcacgtt
ggagagttcatcaacgtcttcagacatggctcattagttatgcagcatccgggtgaaagt
tcaactccgacacaagggtcagtgctctatggtacagtcaatggctctataggtttagta
acacagttttcagaggagctgtacaatttcctgtcagaagttcaaaacaaattgacgaag
gttataaagagtgtcggcaagatagatcacgcattctggcggtctttccacaccgagagg
aaaacagagccagctgctggcttcatagatggggaccttattgagagtttcttagatctc
agcagagacaaaatggctgaagttgttcaaggcctacagattgatgatggcggaatgaag
cgggacgccacagtggacgacctggtgaaaatgatcgaagaattgacacgcatacattag
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