Ptychodera flava: 139131315
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Entry
139131315 CDS
T10724
Name
(RefSeq) vacuolar protein-sorting-associated protein 36-like
KO
K12190
ESCRT-II complex subunit VPS36
Organism
pfll Ptychodera flava
Pathway
pfll04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139131315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pfll04131
]
139131315
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfll04147
]
139131315
Membrane trafficking [BR:
pfll04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
139131315
Exosome [BR:
pfll04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139131315
Exosomal proteins of colorectal cancer cells
139131315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
BBL5
DUF1351
GRAM
Motif
Other DBs
NCBI-GeneID:
139131315
NCBI-ProteinID:
XP_070553424
LinkDB
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Position
4:complement(26708599..26726688)
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AA seq
388 aa
AA seq
DB search
MDRFEWSDGLLLPAESVVTQQAGVKLYDGEDKTGFERGNLVLTNYRLIWKDTVRPNYNIS
MHLSQVVFVEEQSSSFGKSPKIILYLHPAAPNKQGGPVMYSPNTYIKLSFKAAGETEFHR
CLSDQLQRRTWEHQSIPAQQSPTKQSSQPRQVRAGIVGIERKLEEKRKETDQNISMAFQD
LGKLMDQAKSMVDLSKNIATKIKEKKGDITEDETVKFKAYLLSLGISNPVTRETHGSGTK
YHIELAKQLATMLETPIKENGGMMALTDVYCRVNRARGMELLSPDDLVEACKLFESLKLP
LRLRTFTSGVKVIELVSHAEEQAINQTVELLTAQGSLTADELSHSVGISVVLAKGRLLAS
EEKGRACRDESVEGVRFYPNLFLTGPLR
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggacaggtttgagtggtcagatggattactcttgccagcggaatcagttgtaacgcag
caggctggagtcaaactttacgacggggaggataagacgggctttgaaagaggtaatctg
gttcttacaaattacagactgatatggaaagatacagtgagaccgaattacaacatctca
atgcatctgtcacaggttgtgtttgtcgaagagcaatcgtctagctttggtaaaagtccc
aagataatactctacctccatccagctgctcctaacaaacagggtggacccgtcatgtac
agcccgaatacatacatcaaattatcattcaaggcagctggcgagacagagtttcacagg
tgtttgtcagaccagttgcagaggaggacttgggaacatcagagcataccggcacaacaa
agtccaaccaagcagtcaagtcagccgcgtcaagtccgagcaggtattgtgggcattgaa
agaaaattggaagagaagaggaaagaaacagatcagaacatttcaatggcttttcaagat
ctcggcaagttaatggaccaagcaaaaagcatggttgacttgtcaaaaaacatcgccaca
aaaatcaaagagaagaaaggtgacatcacagaggatgagactgtgaagtttaaggcatac
ctgctcagtctgggcatcagcaacccagtcaccagggaaactcacgggtcaggcaccaag
taccacatagaacttgccaaacaattggccactatgctggaaacgccaataaaggaaaat
ggtggaatgatggctttgacagatgtgtactgtagagttaatagggcccggggaatggag
ttactgtctccagatgaccttgttgaagcctgtaaattatttgaatctttgaagcttcca
cttagacttcgaacatttaccagtggagtcaaagtcattgagttggtgtcccatgcagag
gaacaggctataaaccaaacagttgaattgcttacagcacaaggctccctcacagctgat
gaattgtctcactcagttggcatatcagtagtactagctaaaggaaggttacttgcttca
gaagagaaagggagagcgtgtagggatgagtctgttgagggcgttaggttttatccaaat
cttttcctgacggggcctttgagatga
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