KEGG   Ptychodera flava: 139131325
Entry
139131325         CDS       T10724                                 
Name
(RefSeq) replication factor C subunit 3-like
  KO
K10756  replication factor C subunit 3/5
Organism
pfll  Ptychodera flava
Pathway
pfll03030  DNA replication
pfll03410  Base excision repair
pfll03420  Nucleotide excision repair
pfll03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pfll00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    139131325
   03410 Base excision repair
    139131325
   03420 Nucleotide excision repair
    139131325
   03430 Mismatch repair
    139131325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfll03032]
    139131325
   03036 Chromosome and associated proteins [BR:pfll03036]
    139131325
   03400 DNA repair and recombination proteins [BR:pfll03400]
    139131325
DNA replication proteins [BR:pfll03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    139131325
  DNA Replication Termination Factors
   ELG1-RFC complex
    139131325
Chromosome and associated proteins [BR:pfll03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    139131325
DNA repair and recombination proteins [BR:pfll03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     139131325
  Check point factors
   HRAD17(Rad24)-RFC complex
    139131325
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_22 AAA_5 Rep_fac_C AAA_16 AAA_11 ABC_tran AAA_30 RSS_P20
Other DBs
NCBI-GeneID: 139131325
NCBI-ProteinID: XP_070553436
LinkDB
Position
4:26882563..26888678
AA seq 356 aa
MSLWVDKYRPTSLGKLDYHKEQASNLKKLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRMEHQSFTTPSNRKIEVTTIASNYHIEVNPSDAGFQDRVVIQELLKTVAQTNQ
LESSTQKEFKVVVLTEVDRLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPAIQSRCL
GIRVAAPSVEEICQILHMVCKKEGLNLPSELSKRIAEKSGRNLRKALLMCEACKVQQYPF
SPDQEVTETDWEVFLRETANAIVQQQTPKRLLEVRGRLYELLTHCIPPDIIMKGLLAELV
LNCDGQLKAEVTQMAAFYEHRIQQGAKSIYHLEAFVAKFMSIYKRFMEEGMAAMDF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtctgtgggttgataaatacagaccgacgtcgctcggcaagctcgattatcacaaa
gaacaggcttcaaatctcaagaaactcgtacaatgtggtgatttcccacacttactagtg
tatggaccatcaggtgccggaaaaaagaccaggattatgtgtctgctgagggagctgtac
ggagcaggtgtggaaaagctacgtatggaacatcaatcatttacaaccccatccaatcgt
aaaattgaagtcacaacgatcgccagtaattaccatattgaagtcaatccaagtgatgca
gggttccaggacagggttgtaattcaagaacttctgaagacagtggcacaaacaaatcag
ttagaatcatcaacacagaaggagttcaaagtcgtcgttttgacagaagtggatcgcctc
acaaaagatgcccagcatgctttgcgtcgcaccatggagaagtacatgtcgacgtgtcga
ctgattctgtgttgtaactccaccagtaaggtcattccagccatccagagtcgatgcctt
ggtatcagggtagccgcaccatcagttgaggagatttgccagatacttcacatggtatgc
aagaaagaaggcctgaatttacccagtgagctcagtaagagaattgccgagaagtctgga
cgtaaccttcggaaggccttgctcatgtgtgaggcttgtaaagtccaacagtacccattc
agcccagaccaggaagtaacagaaactgactgggaggttttcctcagagaaactgccaat
gctatcgtacaacagcaaacaccaaaaagacttcttgaagtcagaggaagactctatgaa
ttgctgactcattgcattccaccagacatcatcatgaagggtctcctggcagagttggtc
ttgaactgtgatggccagctgaaagcagaggtcactcagatggcagcgttttacgaacac
cgaatccagcaaggtgccaagtcaatctatcaccttgaagcatttgtggccaagttcatg
agtatttataaaaggtttatggaagagggaatggctgcaatggacttctga

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