Ptychodera flava: 139131912
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Entry
139131912 CDS
T10724
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pfll Ptychodera flava
Pathway
pfll03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139131912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfll03019
]
139131912
03036 Chromosome and associated proteins [BR:
pfll03036
]
139131912
Messenger RNA biogenesis [BR:
pfll03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139131912
Chromosome and associated proteins [BR:
pfll03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
139131912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
139131912
NCBI-ProteinID:
XP_070554328
LinkDB
All DBs
Position
4:44503210..44541329
Genome browser
AA seq
1870 aa
AA seq
DB search
MFGQTQKTPFGSGFGGAGTGFGGTTSTPFGQTGTGLFASKTPAASSSFGTPNAFGAQTPA
ASLFGTSTTTTSXDIGSLFSNPGSAFGSKPTQQTAGGFNFGQTSTGGSGGLFGSTAASGT
GGLFATPTSATQSAFGSNFGGASAGLFGQGSSTATTPFGQTSTAQTGLFGTGGFAANAPQ
GTTIKFNALQGTDTMLKAGVSSSISTRHQCITAMKEYESKSLEELRLEDYVANRKGPGTG
AGLLGPGGLTQTDSSKTGGLFGQTSTSSSLFGQKPFGTGTSFGATTGTGSSLFGVGNPQQ
QTGQAGGLFGSKPTGFGATSGSSSLFGTATSTSGFGTGQSLFSQPTSQPAQVGLFGSTPS
TSASGFGTTSGSLFNQTAGFGQPQQQTGSLFNKPAFGTATTSGGLTFGTNTSGLFGTNTK
PGLTLGTNTGLGTGFGTGAQATSLFGNTNKGTTGFGATTGLGTGLGTGLGTGLGTGTSGS
LFGNTGVKPTAGIGAFSGTTGLGTGLGAGTGLGTLGATAATNIGTDPNLALAQQQQAQQQ
ILALASSPFGDSPLFRNTHQDSSKKDELLKPTSASAQKALTTPSHYKVSSRPSPKIKPKP
LYSLAGKQQLFDGLDDEDTALSANVFVPRKNIKKLIINKNKSPQRISPRRSVHDDEDLIA
PQSDYPEVRTSGNGPASETSSIATEDKENGETPADFIKGNQRSQSPSKGQSDLDCTISAL
NVRNDQKSPLRSSEVDSSLNETAESQASIEEDEDYDAEPHPTGIILRRSGYYTIPSMDDL
ADLIDENGDCIVEDFTVGRKNYGSVFFPGLTNVANLNLDEIVHIRRKEITLYPDESNKPP
VGSGLNKKAEVTLDCTWPNDKTTRRPIKSPSRLNTIGYSDKLEIATSKLGAKFKEYRAET
GSWVFLVPHFSKYALEDSDEDEEELQSQDPKKLKVLQQQKQQQQQQQQQQLQQQKPKAEV
KEEDETQPDEPMTDDRDTDSDMADVAREQLSRIPLRDGMDEDEQAMEPMAHSHVFATSLG
MSSHRMQVMKASFFGDEEDQMEQAPSRGFLQRPAVGLLSTPPSMLDDSKQEAFDRSGFGP
AIQPRPLGSPMRYLGVTPASEPTLRNRIPGSEIQTQAKPEPITAGIFAARPLRRGMQVMA
PQPMLLPSGVTHSERSQKQKLVGSRRQCVQLPMEESVMRDKFYMVADSALMMGRSCRVGW
GPNWTLVHFGKPLVQQTEDKGKDQTDTIPFSLFVSKTSQKVETTPFNVIIERVKVAPHLS
ESDKKTQASHERSLDVQLRHSICSTQTGCPVFVPKPGVRALHEYARVAEKDAEENCNTAD
DDSLQLTKLVFTLCEALWGDLPDDVRAERGTYLHQKARRDAFCRWLSTAAREKIQSEVQE
AKAKDCYIDAIFSLLSGNQVSEACQLAQKSKDHRLAMLLAQCEGCFDVRCDLQKQLSNWE
ENKAVKFLEHSRIKVTALLAGCPVWISSEGLINTCETLDWKRALAVHLWYVCNKTASVXD
ALKEYENAFKGRGNFEKYACPPLPIYLENHPEIAVDLEEESDKRHVIRDMCYHLLKLYSQ
HGHRMERILAPTTSTCYQLDYRLSWHTFQVLQSLDYMHISDQHSCMLHCSFASHLESMGM
WQWAVFVLLHIQDDRRREHAIRNILCRHCKLSEDEEYLKREELLVERLSIPVEWIHEAKA
LRAKYEGRHHEQAVHLLKAGHWNDSHVVIITHLAADAIINENYPYLEELLTELAPADRSS
TIQDWNIGGKVYLDYIHVSQRLTDLQRQGEPKMYDVERLHPEIASLCSRVGHLECRTAKD
RLCQSEMAKKTANLMKAVLGLQHQSLHPEQDAVIPSRLLAPHIGRLPMPEDYALQELRQL
TRSYMVEMTA
NT seq
5613 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtcaaacccaaaagactccatttgggagtggctttggtggagcaggtactgga
tttggtggaacaacctccactcccttcgggcagactggaacaggattgtttgcaagcaag
acaccagcggcatctagcagctttggaacgcccaatgcctttggtgcccagacaccagca
gcaagtctgtttggcacttcaacgacaaccacctcangcgacatcgggagcctgtttagc
aatccaggtagtgcatttggaagcaaacccacacaacaaactgctggtggtttcaacttt
ggacagacaagcacaggtggcagtggtgggctgtttggaagcacagcagccagtggtact
ggtggtctatttgcaaccccaacatcagctactcaatctgcatttggttccaactttgga
ggtgcatctgctgggttgtttggtcaaggatccagcacagcaaccactccatttggacaa
acatctactgcacagactggactttttggtacgggaggttttgctgcaaatgctccccag
ggaactaccattaaattcaatgctctccaaggcacagatacaatgctgaaagccggagtg
tcatccagcatcagtacaagacaccagtgcatcacggcaatgaaggaatatgaaagcaaa
agcttggaggaactaaggcttgaggactatgtggcaaaccgcaaaggcccaggtacgggc
gctggtctgttgggtcctggaggattgactcagactgattcaagcaaaactggcgggttg
tttggacagacaagtacaagcagcagtctttttggacagaaaccatttggaacaggtaca
tcttttggagcaaccactggaacaggaagcagtctgtttggtgttggaaaccctcaacaa
caaacaggccaggcaggagggctctttggaagcaaaccgacgggttttggagcaacaagt
gggtcatcctctttgttcggtacagccacatccacatctggctttggtactggtcagagt
ttgttcagccaaccaacgagccaaccagcccaggtagggttgtttgggtccactccatcc
acatcggcatcaggatttggtacgacctctggtagtctttttaaccagacggcaggcttt
ggtcaacctcagcaacaaacgggcagtcttttcaacaaacctgcatttggtacagcaacc
actagtggtgggctgacatttggtaccaacactagtggattgtttggtaccaataccaaa
ccaggtctcacactgggaaccaacacaggcctaggtaccggatttggaacaggagctcag
gccacaagtttatttggcaatacaaataagggaaccactggatttggtgcaaccaccgga
cttggaactggtcttggcaccgggcttggaacaggattgggaactggaacaagtgggtct
ctgtttggcaatacgggagtgaagccaactgcaggcattggagcattctctggcacaact
ggattaggtactggacttggtgcaggaactggtcttgggacattaggtgctacagctgca
accaacataggaacagaccctaatcttgcattagcacagcaacagcaggcccagcagcag
atcctggcattggcaagctcaccatttggagattcaccattatttaggaacacacatcag
gattcttccaaaaaagatgaactgctgaaaccaacaagtgcttcagctcagaaggcgctg
acaactccatcacactacaaagtttcaagtcgacccagtcccaaaatcaaaccaaaacca
ctgtattcactggcaggaaagcaacaactctttgatggccttgacgatgaagacacagcg
cttagtgccaatgtgtttgtaccaaggaagaacattaaaaaactcatcattaacaagaac
aaatcaccccagaggatatcaccacggcgatcagtccatgatgatgaagacctcatcgct
ccacagtcagactatccagaagttaggacatctggtaacggccctgcaagtgagacgtca
agcatagctacagaagataaggagaacggggaaacaccagcagacttcatcaaaggaaat
cagcgcagccaaagcccatccaaaggtcagtctgatcttgactgtacgatatcagctttg
aatgtcagaaatgatcaaaagtctccactgagatccagtgaagtggattcaagtctgaat
gagactgctgaatcccaagccagcattgaggaagatgaggattacgacgcagaaccacat
cccaccggaatcatactccgtaggtctggatactacaccatcccatcaatggacgatctg
gctgatctgatagatgagaatggagactgtattgttgaagatttcacagttggaaggaag
aattacggcagtgttttcttcccggggctgactaatgttgcaaacttgaaccttgatgaa
atcgttcatattcgtcgtaaggagatcacactctacccagatgagagcaacaagccacca
gttggttcagggctgaacaagaaagctgaagtcacgttagattgcacgtggcccaatgac
aagacaacgcgtcggccaatcaagagccccagtagactgaacacgataggctactcagac
aagcttgaaattgcgacttcaaaactgggtgccaagttcaaggagtacagagcggaaact
gggtcatgggtgtttttggttcctcatttctcaaagtatgcacttgaagacagcgatgaa
gatgaagaagaacttcaatcacaagaccctaagaaactcaaggtgctgcagcagcagaaa
cagcaacagcaacagcaacaacagcaacaactgcagcaacagaaaccaaaagctgaggta
aaggaggaagatgagacacagcctgatgaacccatgactgatgatagggataccgatagt
gacatggctgatgttgctagggaacagttgtcaaggataccactgagagatggtatggat
gaagatgagcaagccatggagcctatggcacattcacatgtgtttgcaacgtcacttgga
atgagttcacatcgcatgcaagtcatgaaagcttcattctttggtgatgaagaagaccag
atggaacaggcaccaagtagaggatttctacaaagacctgccgttggcttattatcaact
ccaccgtcaatgcttgatgacagtaaacaggaagcatttgataggagtggctttggtcca
gctatacaacccagacctcttggaagtcccatgagatatcttggtgttactccagcgtca
gaaccaaccctcaggaacagaataccgggcagtgagattcagacacaagccaagcctgaa
ccgatcactgcaggtatatttgcagccagaccattgaggaggggcatgcaagtcatggct
cctcagccaatgcttctgcccagtggagtgacccactcagagagatcacagaaacaaaag
ctggttgggtcacgtcgacagtgtgtccagttaccgatggaggagtccgttatgcgagat
aaattctacatggtggctgattctgctctgatgatgggacgctcatgtcgtgttggttgg
ggtcccaactggactctagtgcactttggtaaacctttagtacaacagacagaagataaa
ggtaaagaccagacagacacaataccattttcactatttgtatccaagaccagccagaaa
gttgaaaccactccattcaatgtgatcattgagagagttaaagtagcgccacacctctct
gaatctgacaagaaaacacaggccagtcatgaaaggtcacttgacgttcaactcagacac
agcatctgctcaacgcagactggatgtccagtctttgtccccaagccgggtgtgagagca
ctccatgagtatgctagagtggctgagaaagatgcagaggaaaactgcaacacagctgac
gatgactcactccaacttacaaagcttgtgtttactctgtgtgaagcactgtggggtgat
ttaccggatgatgtgagagcagaaagggggacatatctgcatcagaaagccagaagagac
gcattctgtagatggctgtccacagctgccagggagaaaatccaatctgaagtccaggaa
gccaaggctaaggactgttacattgatgcaatatttagtcttctaagtggaaaccaagtg
agtgaagcctgtcagctggcacagaaatccaaggaccacagattagctatgcttcttgca
cagtgtgaaggatgttttgatgtcagatgtgatctacagaaacaacttagcaactgggaa
gagaataaagcagtgaaattcttggagcattctcgtatcaaagtaacagccttgttggcc
ggttgtccagtgtggatatcctctgaaggccttattaatacttgtgagacactggactgg
aagagagccctcgcagttcatctttggtatgtctgtaacaaaacagcatctgttngtgat
gctctgaaggaatatgaaaacgcattcaagggaagaggaaactttgagaagtatgcatgt
ccacctcttccgatatatctggaaaatcatccggaaattgctgtggatttggaggaggag
agtgataaacgacacgtcatcagagatatgtgttatcatttattgaaattgtacagtcag
catggacacaggatggaaagaattctagcaccaacgacttcaacatgttaccagttggac
tacagacttagttggcatacattccaagtgttacagtcactagactacatgcacatatca
gatcagcatagctgtatgctgcactgtagctttgcatcacatctggaatccatggggatg
tggcaatgggcagtctttgtcttgcttcacattcaagatgataggcggagagaacatgcc
attcgtaatattctctgtcgtcattgcaagctttctgaagatgaggaatatttgaagaga
gaggaattgcttgtagaaagattgtcaatacccgttgagtggatacatgaagctaaggca
ttgagagccaagtatgaagggcgccaccatgaacaagctgtacatctattgaaagctgga
cactggaatgacagccatgtcgtcattatcacacatcttgctgctgatgctatcattaat
gaaaattatccgtatttagaagaattgctaacagagcttgctccggcagaccgcagctca
accatccaggattggaacattggtggcaaggtctacttggattatatccacgtatcacag
cgcctcacagatctgcagaggcaaggagaacctaagatgtatgatgttgagaggctgcat
ccagagattgcatcgctgtgtagtcgagttggacatttagaatgccgcactgccaaggac
agattgtgccagtcagaaatggcgaagaagacggcaaacctcatgaaggctgtcttgggt
cttcagcaccagtctctgcatcctgaacaagacgctgtcataccatctcgtttgctagca
ccacacataggaagattacccatgccagaagactacgctctgcaggaacttcgacagctg
acccgcagctatatggttgaaatgacggcataa
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integrated database retrieval system
