Ptychodera flava: 139132040
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Entry
139132040 CDS
T10724
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit pan3-like
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
pfll Ptychodera flava
Pathway
pfll03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
pfll03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139132040
mRNA degradation factors
3'-5' decay
Pan complex
139132040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139132040
NCBI-ProteinID:
XP_070554519
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Position
4:48668195..48688948
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AA seq
757 aa
AA seq
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MNSNVGGPKKMAVCRYWANNRTCFYGDDCQFLHDRAPMSGGISPGKNPMKTGIPDRSSRS
LGNPGRAQDQYFQSPFNNMNMGETSMPFQQDLLGNFQIGKDPGPFPFAGNSHGDPLVDDI
AGLSMNPMNDKRGQGPNPGALEFVPGAKNVGGNEFLPGVSEFVPRSKYSAASSNNTSVFS
PANHLTAGSNSFSAAHSPLHSPKLTPTGSPTLRHRSRSPLPSALDLNQVNAGTPGKADAP
TVPGTAAGQLPSHIQENIGGTTYFYTQEQMQNARPASVYPSFHAYPSEPPNISYMLPKPN
APSFFVTEELRLDIINRHLQTMALVDPAQFPDLPSEVDNYHSLCPLEIIPTSPLEKSSTF
GYVTSCYKAVNSKDSKTYCLRRIHGFRLVNTSCMTLVDMWKKIQHSNIVSLREVFTTKAF
GDLSLVFAHDFHAGSETLMCKHFSNSNMATKDHHMKGKYNKGMKSLRQNNGLLPESVIWT
YVIQLSSALRAIHAAGLACRVMDPTKILLSSKSRLRVNCVGIFDVLTFDNQQSNPLAMMP
HYQQEDLVSLGKVVLALACHSVLGIQRENIQSSMELVAMNYSEDLKNLILYLLTNQNRLR
SVNDVMPMIGARFYTQLDAAQARSDIIEEDLAKEVQNGRLFRLLAKLNTICERPEFQMDP
AWSETGDRYLLKLFRDYVFHQVTETGAAWVDIAHINQCLNKLDAGVPEKVCLMSRDEQNV
LVVSYADLKMCFEATFAELLQSNETAAPHQVPPQPPT
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtaatgttggcgggcctaaaaagatggctgtatgtcgatactgggcgaacaat
cggacttgtttttatggagatgattgtcagtttctccacgatcgagcacctatgtcgggt
ggcatttcacctggtaaaaatcccatgaaaacaggcatacctgacagatcgtctaggagc
ctgggaaatccaggaagagctcaagatcaatatttccagtcaccgtttaacaacatgaat
atgggagaaactagcatgccatttcaacaagaccttttgggcaactttcaaattggcaag
gatcctgggccgtttccctttgcagggaactcccatggtgatccactagttgatgacatt
gccgggctgtctatgaatcctatgaatgataaaagggggcagggaccaaatcccggagca
ttggagtttgtgcctggtgccaaaaacgtaggaggaaatgagttcttaccaggtgtcagt
gaatttgtacccagatccaagtattcagctgccagtagtaacaacacatctgtgttttca
ccagccaatcatcttacagctgggtccaactcattctcagctgcgcactcgccgcttcac
tcacccaagttgacacccacagggtcaccgacactcagacacaggtcaaggtcaccattg
ccatcagccttggacttgaaccaagtcaatgctggcactccaggcaaagcagacgcaccc
acagtgcctggcacagcagctggacaattaccaagccacatccaggaaaatatcggtggg
actacttatttctacacacaagaacaaatgcaaaatgcaagacctgccagtgtgtaccca
tctttccatgcgtacccatcagaaccaccaaatatcagctacatgcttcctaaacccaat
gcaccatcattctttgtcactgaagaattaaggcttgatatcataaatcgacatttacaa
accatggctctggtggacccagcccaatttccagatttgccaagtgaagttgataattat
cacagcctgtgcccactggaaatcattccaacaagtccgttagagaagtccagtaccttt
ggctatgtgacatcttgttacaaagctgtcaacagtaaagactccaaaacatactgttta
aggagaatacatggttttcgtttagtgaacacgagttgtatgacacttgtcgacatgtgg
aagaaaatccaacattccaacattgtatctttacgggaagttttcacaaccaaagccttt
ggagatctttccttggtgtttgcccatgatttccatgcgggatctgaaacattgatgtgt
aaacatttcagtaactctaacatggcaaccaaagaccatcacatgaagggcaagtataac
aaagggatgaaaagtctacgtcaaaacaatggtttacttccagaaagtgtgatttggaca
tacgtcatccagcttagctcagcactgcgagctatccatgcagcggggctagcctgtcgg
gttatggatccgacaaagattctgcttagcagtaaatctcgtttacgtgtcaattgtgtc
ggtatttttgatgtcttaacgtttgataatcaacagtccaatccactagctatgatgcca
cactaccagcaagaagacttggtttctttgggtaaagttgttctggcattggcctgccac
tcagtactgggaattcagagggaaaacatccagtcgtctatggaattagtagccatgaac
tactcggaagatttgaaaaatctcatattatatttgttgaccaatcagaatcgcttgcgg
agtgtgaatgatgtaatgcctatgattggggctcggttttacactcagttagatgcagct
caagcacgcagtgatatcattgaagaagatcttgccaaagaagttcaaaatggccgatta
ttccgactgctggccaaattgaacacaatatgtgagagaccagaatttcagatggatccg
gcatggtctgagacaggggatcgttatttactgaaattattccgagactatgtcttccat
caagtgacagaaacaggagctgcatgggttgatattgctcatatcaaccagtgccttaac
aagcttgatgctggtgtgccagagaaagtgtgcctgatgtctcgagatgaacagaatgtt
ctcgttgtttcctatgctgatctcaagatgtgctttgaggcaacttttgctgaactcctg
caatcaaacgagactgctgccccccaccaggtcccaccacagccgccaacgtaa
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