Ptychodera flava: 139133079
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Entry
139133079 CDS
T10724
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pfll Ptychodera flava
Pathway
pfll03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139133079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfll03019
]
139133079
03012 Translation factors [BR:
pfll03012
]
139133079
Enzymes [BR:
pfll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139133079
Messenger RNA biogenesis [BR:
pfll03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
139133079
Translation factors [BR:
pfll03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
139133079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
nSTAND3
AAA_22
AAA_19
AAA_14
ATPase
AAA_34
PhoH
ABC_tran
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
139133079
NCBI-ProteinID:
XP_070555588
LinkDB
All DBs
Position
5:13766065..13793460
Genome browser
AA seq
900 aa
AA seq
DB search
MSYHGGNSRGRKYGRGRYFKSSGNRDDFAEEGGERCGSGGRGRGSRPPAGLKGREIGMWY
RQKSLAKKKQAEVAQRPKVEMDSQREEQISKLLEDIETENITDSDSSEDCSEAASQITDP
ARTYYSKPLIKNYAIDRKLKEELNNKRVGNRRYKEMQKFREKLPTYKMREEVLELIKAHQ
VCVISGETGCGKTTQVAQFILDEYIDNDDGSLCKIVCTQPRRISAVSVAERVADERGETV
GGGMTVGYQIRLESRLPRQQGSITYCTTGILLRWLLGDRMLKGVSHIILDEVHERNIVSD
FLIIILRDLLPCRPELKLILMSATLNAGKFSSYYGDCPMMTIPGFTFPVTEYWLEDVLQH
TGFRLAPSHRSRQKGRPYHWRFIKGKRISEEEKRKEEEYERRFPEYMDSIKDSYPTEVLD
GLQNLDEEEINVDLIVALIQHIVLHCQDGAILVFVPGWSDISKVHETLQRNTMFKSGKFI
IIPLHSLMPTVNQKQVFDRPPAGVRKIIIATNIAETSITIDDVVHVIDTGKSKESNYDVK
NNLRTLKPEWISKAAAVQRRGRAGRVQQGYCYHLFTQLRADLMEAHQLPEMLRTPLEEVC
LQIRLLKLGQIEEFICKSLDCPDLKAVQHAKNSLLQLNAMDSDENLTPLGYHLARLPVEP
HIGKMILFGAIFCCLDPVLTIAASLSFKDPFIIPIGKEKDADYMRKVLSEDTKSDHLMLV
NAFKGWEDAKSLEWRAEKDYCWENFLSMNTLKLLNGMKTQFCEYLCDIGLVESTDCKQPA
ANKNADNLNLIRAVVCAGLYPNVAKIDQTGKKHKPPRLFTKTDGRVNLHQKSVNAGETDL
QGKWLVYHQKIKSTGVYLHDSSVVHPIHCCSLVVISVLALMLDKMSSKLMTGSFSSHHQE
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtaccatggaggtaacagcaggggcaggaaatatggacgtggacggtattttaaa
agtagtggcaacagagacgactttgccgaagagggtggagaaagatgtggaagtggtgga
cgtggaagaggttcaagacctccagcgggattgaaagggagagaaattggaatgtggtat
aggcaaaaatcactggcaaagaaaaagcaagcagaggttgctcaaaggcctaaggttgag
atggatagtcaacgagaggagcaaatatccaagcttttggaagatatagaaacggagaat
attacagacagtgactcgagtgaggattgcagtgaggctgccagtcaaattacagaccct
gccaggacttactacagcaaaccattgattaaaaactatgcaatagatagaaaactgaag
gaagaattaaacaataaaagagtgggaaatagacggtacaaagagatgcaaaagtttcgt
gagaagttgcctacatacaagatgcgagaggaagtgcttgaattaattaaggcccatcaa
gtttgtgttattagtggagagactggctgtggcaaaacaactcaggttgctcagttcatc
ctggatgaatacattgacaatgatgatggaagcctgtgtaaaattgtctgtacacaacct
agaagaatcagtgcagtgtctgttgctgagagggtagctgatgagagaggtgagacagta
ggtggtgggatgactgttggttatcaaatcagactagagtccaggttaccaaggcaacag
gggtcgataacctactgtacgactggaatattgctgaggtggctcctaggagatcggatg
ttgaaaggcgttagtcacataatattggatgaagttcacgagcgaaatattgtgtcagat
ttcctgatcattattctgagagatttgctgccttgtagaccagaacttaagttgatcctc
atgagtgccaccctcaatgccggcaagttttccagttactatggcgactgtcccatgatg
acaattccaggatttactttcccagtaacagaatactggctagaagatgtcctgcagcac
acaggttttagacttgcaccgtctcatcggagcagacagaaaggcaggccttatcactgg
agatttatcaaaggaaagagaatcagtgaagaggaaaaaagaaaggaagaagaatatgag
agaagattccctgagtatatggactctatcaaagacagctatccaactgaagtgttagat
ggactgcagaatcttgatgaagaagaaatcaacgtcgacttgattgttgcgttgattcaa
cacattgtcctgcactgtcaggatggtgcaatactagtgtttgttccaggttggagtgac
atcagtaaagtccatgaaacactgcagaggaacaccatgttcaagtctggcaaattcatt
atcattccactgcattcactgatgccaactgtcaaccaaaaacaggtgtttgatagacct
ccagccggtgtacggaagattatcatcgcaacaaacatagctgagaccagcatcacgatt
gatgatgtggtccatgtcattgatactggcaaatccaaggagagtaattatgatgtgaaa
aacaatctgcgtactttgaaaccagagtggattagtaaggctgcagcggtccagcggaga
ggacgggctggaagagtgcaacaaggctactgctatcacttattcacacaattaagagct
gatcttatggaagctcatcagttaccagaaatgcttagaactccgttagaagaagtctgt
cttcaaattagacttctgaaactcggccagatcgaagaatttatttgcaagtcccttgat
tgccctgacctcaaggcagtacaacatgccaagaacagcctcctacagctgaatgctatg
gacagtgacgagaatctaactccactggggtaccatcttgccaggcttccagtagaacca
cacatcggtaaaatgatcctatttggtgccatattttgctgtctggatccagtcctgaca
atcgccgctagtcttagcttcaaagatccctttatcattcccatcggcaaagagaaagac
gctgactacatgagaaaggttctatctgaagacaccaagagtgatcatttgatgttggtg
aatgcattcaaaggatgggaggatgctaagtcgttggaatggagagctgaaaaggactac
tgctgggagaatttcctctctatgaatactctgaagctgttaaatggaatgaagacccag
ttttgtgaatatctgtgcgatattggacttgttgaaagcactgactgtaaacaaccagca
gccaataagaatgcagataatctgaaccttatcagagctgttgtatgcgctggtctctat
ccaaatgtggcaaagattgatcagacaggaaagaaacataaaccgccaagattgttcacc
aagacagatggtagggtgaatctgcatcagaaatcggtgaatgccggcgaaacagactta
cagggcaagtggttggtctaccatcagaagatcaagtcaactggggtgtaccttcatgac
agttcggtagtacaccctatccattgttgttctttggtggtgatatcagtattggcactg
atgctggacaagatgtcatcaaagttgatgactggatcattttccagtcatcaccaagaa
tag
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