KEGG   Ptychodera flava: 139133426
Entry
139133426         CDS       T10724                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
pfll  Ptychodera flava
Pathway
pfll04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pfll00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    139133426
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pfll04131]
    139133426
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pfll04147]
    139133426
Membrane trafficking [BR:pfll04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    139133426
Exosome [BR:pfll04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   139133426
  Exosomal proteins of other body fluids (saliva and urine)
   139133426
  Exosomal proteins of colorectal cancer cells
   139133426
  Exosomal proteins of bladder cancer cells
   139133426
SSDB
Motif
Pfam: VPS28 SAM_CEP-1_C SLATT_6
Other DBs
NCBI-GeneID: 139133426
NCBI-ProteinID: XP_070556115
LinkDB
Position
5:complement(27908249..27913446)
AA seq 218 aa
MFMGVPSQAQAANRPELYEEVKLHRNAREREKYDNLAELFAVINTLQNLEKMYIKDAVSS
KEYTAACSRLLVQYKAAFKQVQSPEYHTVEEFCRKFRLDCPAAMERIKEDRPITIKDDKG
NTSKCIADIVSLFITIMDKLRLDIKANDELQPDLRELMETINRMSSLPSDFEGKPKVTKW
LQTLGSMTASDELNEDQVRQMLFDLESAYNDFNRALHS
NT seq 657 nt   +upstreamnt  +downstreamnt
atgtttatgggtgttccatcacaggcccaagcggcgaacagaccagagctatacgaggaa
gtaaagctacacagaaatgccagagaacgtgaaaaatatgacaatttagctgaactcttt
gctgtgataaacactcttcaaaatctggagaagatgtacatcaaagatgcagtgtcttca
aaggagtacactgcagcatgttccagactactggtccaatacaaggcagccttcaaacag
gtccagagtcctgaataccatactgtggaagagttttgtcgaaaattcaggctggattgc
ccagcagccatggagagaataaaggaagatcgaccaatcactatcaaagatgacaaaggc
aacacaagtaaatgtattgcagatattgtatctctatttatcacaatcatggataaactg
aggctggatatcaaggcaaacgatgaacttcaaccagacctgagggaattgatggaaact
atcaacagaatgagttccctacccagtgattttgaaggcaaacctaaagttacaaaatgg
ttacagactctcggcagcatgacagcgtcagatgaactcaatgaagatcaggtcaggcag
atgttgtttgacctcgaatcagcgtacaatgatttcaacagagcactacattcatag

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