Ptychodera flava: 139133429
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Entry
139133429 CDS
T10724
Name
(RefSeq) nuclear pore complex protein Nup153-like isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
pfll Ptychodera flava
Pathway
pfll03013
Nucleocytoplasmic transport
pfll03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139133429
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
139133429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfll03019
]
139133429
Messenger RNA biogenesis [BR:
pfll03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139133429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
DZR
Motif
Other DBs
NCBI-GeneID:
139133429
NCBI-ProteinID:
XP_070556118
LinkDB
All DBs
Position
5:complement(27942488..27970674)
Genome browser
AA seq
1563 aa
AA seq
DB search
MSNPGGGKIRPRRTHTTKKPYSRPKPSGGLFGRVKSTLSHLTPSWLAHMWNPASDEDKED
VEEPGEENQRQTRRRVSFESGSSEISRTQENSSELPSQSSGLGPSFKSPPQVPFFRYEPL
TSSTPIEGEQVEDDNVAGKAEKEEDSNSDESISTSGCSSLVPHVGKIDYKDKERVDQKMA
SERKSKKDRENREQKRGLWSDFGTSSGRVSSIGQAQQPGRSSTKPSFNASYFGSPLYSSD
AVTPPITPGGSSFYPGRTSFGGASTQRSAKRRRTSPYEIYQPVKRQMRPKPVNSTADDYG
ETSVTAKRILDTLERMSTPLSDARRIPVVPSSSPLSFTPFGKGASRNKSHGGSFLTLRTD
LTMKTAPPVFGLRTPLLARISKNRQPPAQTVSKPKQTQEEAKVPVSTTSVTASTEPSKST
FSGFGSTGVTTITSTPLSSLSAAAEPSTKESSLSKSGGKMKTKSRTNLHYSVGKDEEDEV
EPDLPQHIPLPLADTKPLPKFDLSVPAPSVTKTTSSSTSKQSQWTTSTPAVTAPTSEASF
KFAPSASPEISFKFASPIAKESVDRVPSDLQDTAQPTFQFSVPKPVSQDESKSPNVNFKV
QEETPFKVKKLPEKAQTSNTEEENTSIGGGLKPAKELKSGSCLEVFGIKSSSSVKSKEQS
SLSSGSKDSPVTVNDDNASTKQTTGKSIWDKTPASGSWECPVCMIYNTNDKNNCAACGEN
KPGHKEETQTPILSSIFGAKPSPGSWECPTCMIMNSSDVSKCPCCETVKPGSQPESSAAP
IAFGASKPLSLAERFKPPSGSWECPTCCIQNKSDVKNCVACGKTKPGESQNESAPKFKFG
TASDSSTKANSTFKFGGSASESTTKSTFKFGDSSDTTTTTTANFKFGAQNSVPSSEKVGA
SSEVTGSIFSKQKTDMWVCDTCWVQNKASDKKCVACQTPVPGTQATLDSPPKSTFTFGAS
ETSSTSPATGTAPSGFTFGGMSTFPTSELSTKPLSQANNTPANVSVVDGKTDSSVPSITL
GTGLAAAKDSTPQITFETKPAEQSKDLESVKPSLGGLVSKSESSNNNSNVSLASNVIFAP
KTDSTSVSSSFAFGQVKTTDSAPSATGFTFGQKTETAVSAKVLPTPKESKAETSGFSFGG
TAAPFQFGAAASEGRDKTTSIQSSVVANGNSKTEAAKPAAPVYPFTGNTSETTAKPSSGT
GFTANTDIKPEETKGKGGFAFNTGGSTTNQATPTAAAPGTGGFAFAATSKGTGGTSTDAG
SSGLFSGAAAATPVFNFTGGASTTKPSTTATPQSTTVPPFQFSAGTSSQPPAPTGSSTAS
QGLTGSSGIFGQSGTAGFGAAQQNSFGGFQFSTSAATTTTASSTPAFGSGTAPAFGSGMS
GTSAFGATSSFGSQTTSANTGTAAAAAAPAFGSISAGTPAAAAAPAAPAFGSAAPAFGTN
PAASTQQTAGASGFSFGTNPSGSFSSGSSVFQFSAGKDSAPAPQAGTTPTPTQSVGFSAP
QPAGGFNAAPSTGAPPAYNFTASTPTPNTFNFSGNQTTTPSNPFSASGSVAGRKIKRPIR
RIK
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacccaggtggtggtaaaattcgcccgagaaggacgcatacgactaagaagcca
tattccagacccaagccatctggtggtttattcggacgtgttaaaagcaccctcagtcac
ctgaccccatcatggcttgctcacatgtggaacccagcttctgatgaagacaaagaggat
gtcgaggaaccgggcgaggaaaaccaacgacagacaaggcgccgagtctcttttgaatca
gggagctcagagatttccagaactcaagagaacagttcggagttgccgtcgcaaagctca
ggattggggcccagtttcaagtctccccctcaagttccattctttcgatatgagccactg
acgagttccacacccatagaaggggaacaagtggaagatgacaatgtggcaggaaaggct
gaaaaagaagaagactccaattctgatgagtctatttccaccagtgggtgctcatctctg
gtgccacatgtcggcaaaatagattacaaagacaaagaaagagtggatcaaaagatggcc
agcgaacgaaagagtaaaaaagacagagaaaatcgggaacagaagcgcgggctgtggtct
gattttggcacaagctctggtagagtgtcttcaattggtcaagcacagcagcctgggaga
agcagtacaaaaccatcattcaatgcctcctactttggctcacctctctattcctctgat
gcagtcactcccccgattacacccggcggatcctctttctaccctggacggacgtcattt
ggaggtgcttccactcagagatcggccaaacggaggaggacatccccttatgagatatac
cagccagtgaaacgtcagatgagaccaaagcctgtcaacagtacggccgatgactacgga
gagaccagtgttacagctaagagaatacttgacacgttagaaagaatgtccacaccgttg
tctgatgctagaagaattcctgtggtcccatcatcatcaccattgtcatttactccattt
ggtaagggtgccagtcgaaacaagagccacggtggcagcttcctgactctacggacagac
ttgaccatgaagacagcgcccccagtgtttggattgagaacaccactgctggctaggata
tctaaaaacagacagcccccagcacagactgtttccaagcccaagcagactcaagaggaa
gccaaggtacctgtcagtactaccagtgtgactgcttcaacagaaccaagcaaatcaacc
ttctccggttttggcagcacaggtgtgacaaccatcacgtccactccactgtcatcgctt
tcggcagccgcggaaccttccacaaaagagagcagcttatctaaaagtggtgggaagatg
aagaccaaaagtcgcaccaatctccattactcagtgggcaaagatgaagaagatgaggtt
gagccagatctaccacaacacataccgctaccattggcagataccaaaccactacccaag
tttgacttgagcgtcccagcaccttctgtaaccaagaccacatcatcttcaacatccaag
caatcccagtggaccacatcaacgccagctgtaactgccccaacctctgaagccagtttc
aaatttgcaccctcggcctcccccgagatctcattcaagtttgcctcccctattgctaaa
gaatctgttgatcgtgttcccagtgatttacaagatactgcccagcctacattccaattc
agtgtacccaaaccagtcagccaggatgaaagcaaatcgccaaatgtcaacttcaaggtc
caagaagagactccctttaaggtaaagaaacttccagagaaagcacagacaagcaacaca
gaggaagaaaacaccagtataggtggtggactgaaaccagccaaggaattgaaatctggt
agctgtctagaagtatttggaatcaagtcaagttcaagcgtcaagagcaaagaacagagt
tcgttatcatcagggagcaaggactcaccagtgacagtcaatgatgataatgcaagcaca
aaacagacaactggtaaaagtatatgggacaaaacaccagcatccggatcgtgggagtgt
cctgtctgtatgatttataacacgaatgataaaaataattgtgcagcgtgtggtgaaaat
aaaccaggtcataaggaggagacccagactcctattttatcaagtatatttggcgcaaaa
cccagccctggatcttgggaatgtccgacctgtatgattatgaactcatcagatgtcagt
aaatgcccgtgttgtgagacagtcaagcccggcagccaaccggaatcctcagctgctccg
attgcattcggggcgtcaaaaccgttgagtctcgcggaacggttcaaaccgcccagcggg
tcgtgggagtgcccgacctgctgtattcaaaacaagagcgatgtcaaaaattgcgtggca
tgcggcaagacgaaaccgggtgaaagtcagaatgaaagtgcgccgaagttcaagttcggc
actgccagtgacagttcaaccaaggcgaactcgacatttaaatttggcggcagtgccagc
gaaagtaccaccaagtcaacgttcaagtttggagacagcagtgacaccaccaccacaaca
accgcgaatttcaagttcggagctcaaaactcagtcccctcctcagaaaaagtcggtgct
agtagtgaagtgactggttcaatatttagcaaacagaaaacagacatgtgggtatgtgac
acttgctgggtccaaaacaaagcatcagacaagaagtgcgtggcatgccagactccagta
cctggaacacaagcaacgctagacagtccaccaaaatccacattcacattcggggcctca
gaaacaagcagcacctcacctgccactgggaccgcgccttcaggcttcacctttggaggc
atgtccactttcccgacttcagaactcagcacgaagcccttgagccaagcaaacaacacg
ccagccaatgtgagtgttgtggacggcaaaacagattctagtgtacccagcatcacgctg
ggcactggccttgctgctgcaaaggactccacaccacaaatcacgttcgaaactaagcca
gctgaacaaagcaaggacttagaatcagtcaagccaagccttggtgggcttgtttccaaa
tcagaaagctccaacaacaactcaaatgtatcgttggcctcaaatgttatctttgctcca
aagacagacagtactagcgtaagcagcagttttgccttcggtcaagtcaagactacagac
tcggcacccagtgcgacaggctttacatttggacagaaaacggagactgcggtgtctgcc
aaggttttacccacgcccaaggaatccaaggctgaaacttcagggttctcatttggcggt
accgcagctccattccagtttggagcagctgcctcggagggcagggacaagactactagt
atacagagctcagtggtcgcaaacggtaacagcaagacagaggcagccaaaccagccgca
ccagtgtatcccttcactggtaacacatcagaaaccacagcaaagccgagtagtggcaca
ggtttcactgcaaacacagatatcaaacctgaagagaccaaagggaaaggaggctttgca
ttcaacactggaggctcaaccacaaaccaggccacacctactgctgctgcccctggtact
ggtggctttgcctttgctgccacatctaaagggacaggtggaacatctacagatgccgga
agtagtggtttgttcagtggtgctgcagcggcgacaccagtcttcaacttcactggcggt
gcatcaactacaaagccttcaacaacagcaacaccacagagtacaacggtgcctcccttt
cagttttcagctggaacttcatcgcaaccacctgcccccacaggtagttccactgcatct
caaggattgactggctcaagtggcatctttggtcagtcagggactgctggttttggtgct
gcccaacaaaattcattcggaggctttcagttctccacatcggctgcaacgacaaccaca
gcgtcgtcgacaccagcttttggatcaggaactgcacctgcatttgggtcaggaatgtct
ggcacatcggcctttggcgctacaagctcatttggaagccaaactacctctgcaaacaca
ggcacagcagcagcagcagcagcgccagcttttggcagcatatcggccggcacaccagcc
gctgcggccgcacctgcagcccctgctttcggcagcgctgctccagcatttggaactaac
cctgcagcctctacccaacagactgctggtgcctcaggattctcgttcggcaccaatccc
agtggctctttcagcagcggcagttcagttttccagttttcagcaggcaaggactctgcc
cctgctcctcaggctgggacaaccccaacaccaacgcagtcggtaggattctcggcaccc
caacctgctggcggattcaatgcagcgccctctacaggcgccccaccagcttacaacttc
actgcttcaactcccacgccaaatacatttaatttcagtggaaatcagaccaccacccct
tccaacccgttcagcgcatccggatcagttgccggccggaaaattaagagaccaatcagg
aggataaagtaa
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integrated database retrieval system
