Ptychodera flava: 139133524
Help
Entry
139133524 CDS
T10724
Name
(RefSeq) transcription factor Sox-17-alpha-B-like
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
pfll Ptychodera flava
Pathway
pfll04310
Wnt signaling pathway
Brite
Transcription factors [BR:
pfll03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
139133524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139133524
NCBI-ProteinID:
XP_070556279
LinkDB
All DBs
Position
5:32405246..32410092
Genome browser
AA seq
543 aa
AA seq
DB search
MATIKVEPQTSFETTTTTAPTVNPSIFLTSLPNFSMTGVTAASLINSAAAVTNGTAAGLI
QSAGFKWMEKKQAASEGNNGKQKKEQRIRRPMNAFMVWAKDERKRLADQNPDLHNADLSK
MLGKAWRSLSLVQKRPFVEEAERLRVQHMQDHPDYKYRPRRRNKQAKRVCKRVEGARFLP
ALAGYPTSNDSGSTSTPVTPNSVASTPTTPNVSSLQTPDVSPRTSPTPDQDSVATNSDNG
LQTTDKFTTINEKTRLTLNTESLATMNLPTPVMSPLDMMTESDNIFTFPSTVEDNGFTSL
TESSHKPQVQEATQGSQQLFGNANFLKNSTPTTFASTHPASSQNVGTQHLSTLRALVTSP
HPLTTSLFNNSNNNSNMLQHQVTSQSLPFPSPPPDSAPPTPVGALDQLSQQIKIEADQGY
CSSSALSTAPSTPVNTPIQPNFPMKSEPLTANQSLSFNEQHMDSYLADNQILAQNNIDYG
NVSQSTIESVISALEQFTEAELLGDVDRDEFDMYLNTTQPQNLENSLISVLADATASMYY
MNN
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctacgataaaggttgaaccacagacgtcgtttgagacgacaactacaaccgctcca
acggtgaacccaagtatatttctgaccagcttgccaaatttctcgatgactggtgtcacc
gctgcttcgctgattaactcggccgccgctgtcacgaacgggaccgctgccggtctgata
caatcagctggcttcaaatggatggaaaagaaacaggctgcaagcgagggcaataacggc
aagcagaagaaggagcagcgaattcggcggcccatgaacgctttcatggtctgggccaaa
gacgaacgtaagagactggctgaccaaaatccggatcttcacaacgctgatctgagtaaa
atgctcggcaaagcttggcgcagtctctctctggtgcagaagagaccatttgtggaagag
gctgagcggctgagagtccagcacatgcaagatcaccccgactacaaatacagacctaga
cgccgtaataagcaagcgaaacgagtatgcaaacgtgtggaaggcgcaagatttctaccg
gcactcgctggttacccaacgagcaacgattctggcagtacatcgacacccgtcactccc
aacagcgtagcatcaacccctacgacgccgaatgtgagctcccttcaaactccggacgta
tcgccgcgcacttcgccgactccggaccaggacagcgtcgccacaaactctgacaatgga
cttcaaacaacagacaagttcacaacaattaatgaaaaaacacggcttactcttaacaca
gagtccttggcgactatgaacttgccaactcctgtaatgtcgcccttggacatgatgacg
gaatcggacaatattttcacctttccgtcaactgtagaggacaacggtttcacctcgctc
acggaatcgtcgcacaaaccgcaagtccaagaagctacccaaggatcgcagcaacttttc
ggtaacgcgaactttcttaaaaattcgaccccgacgacgtttgctagcactcacccggct
agcagccaaaacgtcgggacccaacatctcagtacattgcgtgccttggtgacaagcccc
caccctcttacaacctctctcttcaacaacagcaataataacagcaacatgctgcagcat
caggtgacgtcacagagcctgcctttcccatcaccaccaccggacagcgctccgccaaca
ccggttggtgccctcgatcaactcagccagcaaatcaaaatcgaggcggatcaaggatac
tgctcatcgagtgcgctttcaacggccccgtcgacacctgtcaatacaccaattcagccg
aacttcccgatgaagagcgagccactgacagcaaaccagtcgctttccttcaacgaacaa
cacatggattcgtatctggcggacaatcagattctggcgcaaaacaacattgattacggc
aatgtgtcacaatcaacgatcgaaagtgtgatctcggccctcgagcagttcacagaagcc
gagttgctcggcgatgtggacagggacgagtttgatatgtacctgaacactacccagccg
cagaatcttgaaaacagcctcatatctgttcttgcggatgcaactgcctctatgtattac
atgaacaattga
DBGET
integrated database retrieval system
