Ptychodera flava: 139134007
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Entry
139134007 CDS
T10724
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
pfll Ptychodera flava
Pathway
pfll04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139134007
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pfll01009
]
139134007
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pfll04131
]
139134007
03029 Mitochondrial biogenesis [BR:
pfll03029
]
139134007
Protein phosphatases and associated proteins [BR:
pfll01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139134007
Membrane trafficking [BR:
pfll04131
]
Autophagy
Autophagosome formation proteins
ULK complex
139134007
Mitochondrial biogenesis [BR:
pfll03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
139134007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
TBK1_ULD
DUF6497
DUF7880
Motif
Other DBs
NCBI-GeneID:
139134007
NCBI-ProteinID:
XP_070556941
LinkDB
All DBs
Position
5:42350570..42373586
Genome browser
AA seq
895 aa
AA seq
DB search
MLYIFLVDTGTMLNFDMNLAVESVSHLQAAIADECQIPVDKQVLLISGGENLDPAMRVCS
YHAGTDTNPIFLFSKSTIEAAAPPSPSVYGGSDGDLKYQVEGSLNMQPSFETVVSRVQLA
LQISDLARDEVSCCESLVHDQHLQQQGWAAVVANLEDISSAFGHRSNIFKQNFEEFLVTR
SQYFTMLSDFSTVLTLLSKMPLLPCLLPQRQNQQKPADLSKCITLLQWISSQDQRSTLQQ
MAEQCLKALEQFDESVLNNLMTEINTALEAVDNASMKEIKGLGDRLFGLEQLMAGARKIV
QEQGDMSQGFVQNQERVTKLNDPSILPDLCASHQKQLIVMLKNHSQLRDIRRRCTLAKEE
LSANLHARLRWIMYVEKQISDIDSKMVIYHENLKRLRRRLEVVEQIDMAPRLYAMAVVEV
YRRKLFSSKFMQWATKLTDESSNIQGEEISRRMEFSALMGKHFLHGLFPGIDDYPSAFAR
EIPEPFDARLPEITDTDITQLRQEVPELATVLRIPSGENFMKDFEEHHQEVMALKSLTAR
SPLKELPEGNETSLIGNVNNQPQQMPSKDGTVVAEATKNAKMEEDEDSKRLSLSFEKVEN
VLDEEFQKMAEEQRQSLIKIDEVLQDKSPETPVTNVNQSPFVSFTDQNDDFVSAPQSLIP
DLTSKGRHDTTDAATALHTDLMQKSIQLVKVQNELETTKTYLANEQEKFKKLLQTLDKTR
SNMKLDMQSLEKDIQNEKEKYGLLVGDAREKFIQAVESVKAEHDKEKSDLQKMIDKVKQS
SKEMEEMYQNKLKEQLDRFNSLQEQAKQLQEQLKSSGDNAQALQQNYESKIQEITNKLID
ERNDAVASTRQELTNHIREMGIDIKSKEKVIAELALEKDQLAKDLTAGLRKAKRS
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgttgtacatcttcctggttgatacaggcactatgctgaactttgacatgaatctggct
gttgaaagtgtaagtcacttgcaagcagccattgcggatgaatgccagattcctgttgac
aaacaagtgttgttgataagtggaggtgaaaatttggatcctgcaatgagagtctgcagt
tatcatgctggaacggacaccaacccaatcttcctattcagtaagagtaccatagaggcg
gcagcaccaccatcacccagtgtgtacggtggctctgatggagatctgaaataccaagtg
gagggatcactaaatatgcaaccttcatttgaaacagttgtatccagagttcagttagcc
ctgcaaatttctgacttggcccgtgatgaagtctcgtgttgtgaaagtttggttcatgat
cagcatttacagcagcaaggctgggcagcagttgttgctaaccttgaagacatcagcagt
gctttcggacacagatccaacatattcaagcagaattttgaagaatttctagtgaccaga
tctcaatacttcaccatgttgagtgacttcagcactgtcttaactcttctctccaaaatg
ccacttcttccatgtctgttgccacagcgacaaaaccaacagaaaccagctgatttgtca
aaatgcataacattactacagtggataagtagccaggaccagagaagtaccttacagcaa
atggcagagcaatgcttgaaggcattagaacagtttgatgaatctgttctcaataattta
atgacagagattaatacagcattagaggctgtagacaatgccagcatgaaggaaatcaaa
ggtcttggtgacagattgtttggattggaacaactgatggctggtgcaaggaaaatagtt
caagaacaaggagatatgtcacagggatttgttcaaaaccaggaaagagtcaccaagttg
aacgatccttccattctgcctgacctatgtgcaagtcaccaaaagcagttaatcgtcatg
ttgaaaaatcacagccaacttcgagacatcagaagacggtgtacacttgccaaggaagag
ctatctgcaaatttgcatgcaaggctaaggtggataatgtatgtagagaaacagatatcg
gatattgacagtaaaatggtcatttatcatgaaaatttgaagaggttaagaagacgtctt
gaagttgttgagcagattgacatggcaccaagactgtatgcaatggctgtggtagaagtg
tatcgtaggaagttgttttctagcaaattcatgcagtgggcaacaaaattgacggatgaa
tccagcaatatccaaggagaagaaatttcaagaagaatggaattttctgctctaatggga
aaacatttcctgcatggtttattcccagggatagatgattacccatcagcctttgcgaga
gaaatcccagaaccctttgatgccaggctgcctgagataacagatacagatattacacag
ctcagacaggaagtgccagaattagctacagttctacgtattccaagtggtgaaaatttc
atgaaagattttgaagagcaccaccaagaggtaatggccttgaaaagtctgacagccagg
agtccattgaaagaattacctgaaggaaatgagacttcactcattgggaatgtaaacaat
caacctcaacagatgccttccaaagacggcacagtggttgccgaggctaccaaaaatgct
aagatggaggaagatgaggactcaaagagacttagccttagctttgagaaagttgaaaat
gtcctggacgaagagtttcagaaaatggcagaagagcaaagacagtctttgatcaagatt
gatgaagtgctgcaggacaagagtccagagacaccagttacaaatgtgaatcagtcaccc
tttgtgtcgttcactgaccaaaacgatgactttgtgtcagctccgcagagtctaatacca
gatctaaccagcaaaggcagacacgacactacagatgctgctacagctctacacacagat
cttatgcagaaatctatccaactcgtcaaagtgcaaaatgaactagaaacaacaaagaca
tatctagctaatgagcaggagaaattcaaaaaacttttacaaaccctagacaaaacaaga
tctaatatgaaattggacatgcagagcttagagaaagatattcaaaatgagaaagaaaaa
tacggtttgttagtcggagatgccagagaaaagtttattcaagcggtagaatctgtgaaa
gccgaacatgacaaagaaaagagtgaccttcagaaaatgattgacaaagtgaaacaaagt
agcaaagaaatggaagaaatgtatcaaaataaattgaaagagcagcttgataggtttaat
agtttacaggaacaagcaaagcagttacaggaacagttgaaatctagcggagacaatgct
caagcattgcaacagaactatgaaagtaagatacaggaaataacaaacaaactaatagac
gaaaggaatgatgctgtagcaagtactagacaggaattgaccaatcatatcagagaaatg
ggcattgatatcaagtctaaagaaaaggttatagcagagttggcacttgaaaaagaccag
cttgcgaaagatttgaccgctgggttgagaaaagcaaaaaggagttag
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