Ptychodera flava: 139134130
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Entry
139134130 CDS
T10724
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
pfll Ptychodera flava
Pathway
pfll04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139134130
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pfll01009
]
139134130
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pfll04131
]
139134130
03029 Mitochondrial biogenesis [BR:
pfll03029
]
139134130
Protein phosphatases and associated proteins [BR:
pfll01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139134130
Membrane trafficking [BR:
pfll04131
]
Autophagy
Autophagosome formation proteins
ULK complex
139134130
Mitochondrial biogenesis [BR:
pfll03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
139134130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
FAM184
Motif
Other DBs
NCBI-GeneID:
139134130
NCBI-ProteinID:
XP_070557149
LinkDB
All DBs
Position
5:complement(47013424..47037895)
Genome browser
AA seq
1265 aa
AA seq
DB search
MQPSFETVVSRVQLALQISDLARDEVSCCESLVHDQHLQQQGWAAVVANLEDISSAFRHR
SNIFKQNFEEFLVTRSQYFTMLSDFSTVLTLLSKMPLLPCLLPQRQNQQKPADLSKCITL
LQWISSQDQRSTLQQMAEQCLKALEQFDESVLNNLMTEINTALEAVDNASMKEIKGLGDR
LFGLEQLMAGARKIVQEQGDMSQGFVQNQERVTKLNDPSILPDLCASHQKQLIVMLKNHS
QLRDIRRRCTLAKEELSANLHARLRWIMYVEKQISDIDSKMVIYHENLKRLRRRLEVVEQ
IDMAPRLYAMAVVEVYRRKLFSSKFMQWATKLTDESSNIQGEEISRRMEFSALMGKHFLH
GLFPGIDDYPSAFAREIPEPFDARLPEITDTDITQLRQEVPELATVLRIPSGENFMKDFE
EHHQEVMALKSLTARSPLKELPEGNETSLIGNVNNQPQQMPSKDDTVVAEATKNAKMEED
EDSKRLSLSFEKVENVLDEEFQKMAEEQRQSLIKIDEVLQDKSPETPVTNVNQSPFVSFT
DQNDEFVSAPQSLIPDLTGKGRHNSADATTALHTDLMQKSIQLVKVQNELETTKTYLANE
QEKFKKLLQTLDKTRSNMKLDMQSLETDIQNEKEKYGLLVGDAREKFIQAVESVKAEHDK
EKSDLQKMIDKVKQSSKEMEEMYQNKLKEQLDRFNSLQEQAKQLQEQLKSSGDNAQALQQ
NYESKIQEITNKLIDERNDAVASTRQELTNHIREMGIDIKSKEKVIAELALEKDQLAKDL
TAGFEKSKKELESRLRKEAEIEQRKNILAAEEKLESIRRKETETMQTGFDEKIKNVVDEC
AREKDSVRKDMELKQNEALHEMKETFEQQKMKEIEALRQQLIKERDAEVGKLTEKFEREK
NEYVTNIQSKLDEQLAACKMEESFHTDKQSAILDAVETERRKYEERLNKLRADFNEERDQ
AIAAAVEMEKQRHHAEMDEFIRSHEKDKQDSLTSMRNSLQAEKQVSFNEAVAKVGLEKAK
IIAELERKIEELEKQNEERQDTIAKLLAGNADINEETQKSLSLTLERENQLKARIATLER
QLDQAEKKLEVLEGRVPLQRERPPSMSFEKFPDGGLSASAHSDITNTSLESRDRHHMLEV
ALKAKEEECNTLNQRLLQLTRAASAKADKVTIQNFSIGDIVLICFDEYRENYVIFTIGPI
LYFVHSDSVSGLELKPQPGKDRRLWVLGQITDKEYCQAKKAQNRFKVPPGTKFYRVKAVP
WPKKA
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccttcatttgaaacagttgtatccagagttcagttagccctgcaaatttctgac
ttggcccgtgatgaagtctcatgttgtgaaagtttggtacatgatcagcatttacagcag
caaggctgggcagcagttgttgctaaccttgaagacatcagcagtgctttcagacacaga
tccaacatattcaagcagaattttgaagaatttcttgtgaccagatctcaatacttcacc
atgttgagtgacttcagcactgtcttaactcttctctccaaaatgccacttcttccatgt
ctgttgccacagcgacaaaaccaacagaaaccagctgatttgtcaaaatgcataacatta
ctacagtggataagtagccaggaccagagaagtaccttacagcaaatggcagagcaatgc
ttgaaggcattagaacagtttgatgaatctgttctcaataatttaatgacagagattaat
acagcattagaggctgtagacaatgccagtatgaaggaaatcaaaggtcttggtgacaga
ttgtttggattggaacaactgatggctggtgctcggaaaatagttcaagaacaaggagat
atgtcacagggatttgttcaaaaccaggaaagagtcaccaagttgaacgacccctccatt
ctgcctgacctatgtgcaagtcaccaaaagcagttaatcgtcatgttgaaaaatcacagc
caacttcgagacatcagaagacggtgtacacttgccaaggaggagctatctgcaaatttg
catgcaaggctaagatggataatgtatgtagagaaacagatatcggatattgacagtaaa
atggtcatttatcatgaaaatttgaagaggctaagaagacgtcttgaagttgttgagcag
attgacatggcaccaagactgtatgcaatggctgtggtagaagtgtatcgtaggaagttg
ttttctagcaaattcatgcagtgggcaacaaaattgacggatgaatccagcaatatccaa
ggagaagaaatttcaagaagaatggaattttctgctctaatgggaaaacatttcttgcat
ggtttattcccggggatagatgattacccatcagcctttgcgagagaaatccctgaaccc
tttgatgccagactgcctgagataacagatacagatattacacagctcagacaagaagtg
ccagaattagctacagttctacgtattccaagtggtgaaaatttcatgaaagattttgaa
gagcaccaccaagaggtaatggccttgaaaagtctgacagccaggagtccattgaaagaa
ttacctgaaggaaatgagacttcactcattgggaatgtaaacaatcaacctcaacagatg
ccttccaaagacgacacagtggttgccgaggctaccaaaaatgctaagatggaggaagat
gaggactcaaagagacttagccttagctttgagaaagttgaaaatgtcctcgacgaagag
tttcagaaaatggccgaagagcaaagacagtccttgatcaagattgatgaagtcctgcag
gataagagtccagagacaccagtgacaaatgtgaatcagtcaccctttgtgtcgttcact
gaccaaaacgatgagtttgtgtcagctccacagagtctcataccagatctaaccggcaaa
ggcagacacaactctgcagatgctactacagctctacacacagatcttatgcagaaatct
atccagctcgtcaaagtgcaaaatgaactagaaacaacaaagacatatctagctaatgag
caggagaaattcaaaaaacttttacaaaccctagacaaaacaagatctaatatgaaattg
gacatgcagagcttagagacagatattcagaatgagaaagaaaaatacggtttgttagtc
ggagatgctagagagaaatttattcaggcggtggaatctgtgaaagctgaacatgataaa
gaaaagagtgaccttcagaaaatgattgacaaagtgaaacaaagtagcaaagaaatggaa
gaaatgtatcaaaataaattgaaagagcagcttgataggtttaatagtttacaggaacaa
gccaagcagttacaggaacagttgaaatctagcggagacaatgctcaagcattgcaacag
aactatgaaagtaagatacaggaaataacaaacaaactaatagatgaaaggaatgatgct
gtagcgagtactagacaagaattgaccaatcatatcagagaaatgggcattgatatcaag
tctaaagaaaaggttatagcggagttggcgcttgaaaaagaccagcttgcgaaagatttg
accgctgggtttgagaaaagcaaaaaggagttagaaagtaggttaagaaaagaggcagaa
attgaacagaggaaaaatatcctagcagcggaggaaaaactggagagcatacggaggaaa
gaaacagagactatgcagactggttttgatgagaaaatcaaaaatgtagttgatgagtgt
gctagggagaaggatagtgttagaaaagatatggaattgaaacaaaacgaggctttgcat
gaaatgaaagagacatttgaacaacagaaaatgaaagaaattgaagcattaaggcaacaa
cttataaaagaacgtgatgctgaagtagggaagctaaccgagaaatttgagagggaaaag
aatgaatacgtgacaaatattcagagtaaacttgatgaacagttagctgcgtgtaaaatg
gaagagtccttccatacagacaaacaaagtgcaattcttgatgccgttgagacagaacga
aggaagtatgaggaaaggttgaataaacttagagcagactttaatgaggaaagggatcag
gctatagcggctgccgtggagatggaaaaacagagacaccatgccgagatggatgaattt
atcagatcacatgaaaaggacaagcaggatagtctgacaagtatgaggaacagtttacaa
gctgagaaacaagtcagcttcaatgaagctgtggctaaagttggccttgagaaagcaaaa
atcatcgccgaacttgaacggaaaattgaggaattggagaagcagaatgaggaaagacaa
gacaccattgctaagctgcttgctggaaatgccgatattaatgaagaaactcagaaatca
ctgtcactgactcttgagagggaaaatcaactgaaagcaaggattgcaactttagaaagg
caattagatcaagctgagaagaaactagaagttttagaaggacgggtaccattgcaaagg
gaaagaccgccctctatgagttttgaaaaatttccagatggtggattatcagcttcagct
cacagtgatatcaccaacactagtttagaatctagagatagacatcacatgttagaagta
gcactcaaggccaaggaggaggaatgtaataccttaaaccagagactgttgcagttaacc
cgagcagcttctgctaaggcagacaaagtcaccatacaaaatttctccattggtgacatt
gtgttgatctgttttgatgaatatcgtgaaaattacgtgatatttacaatagggccaatc
ctctactttgtgcattctgattccgtcagcggactggaattaaaaccacaaccaggaaag
gacagaagactctgggtactgggtcagataactgacaaagaatattgccaggcaaagaag
gcacaaaaccggttcaaggttcctccaggcacaaagttctacagagttaaagcagtaccc
tggccaaaaaaggcgtaa
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integrated database retrieval system
