KEGG   Ptychodera flava: 139135371
Entry
139135371         CDS       T10724                                 
Name
(RefSeq) WD repeat-containing protein 82-like
  KO
K14962  COMPASS component SWD2
Organism
pfll  Ptychodera flava
Pathway
pfll03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pfll00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    139135371
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfll03019]
    139135371
   03036 Chromosome and associated proteins [BR:pfll03036]
    139135371
Messenger RNA biogenesis [BR:pfll03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     139135371
Chromosome and associated proteins [BR:pfll03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     139135371
    COMPASS/SET1 complex (yeast)
     139135371
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_TEP1_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin Beta-prop_EML WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_WDR75_1st WD40_RFWD3 PROPPIN Beta-prop_WDR19_1st Beta-prop_Vps41 NBCH_WD40 Tricorn_2nd RMC1_N Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_WDR35_TULP_N WD_LRWD1 Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_ACSF4 MIOS_WD40
Other DBs
NCBI-GeneID: 139135371
NCBI-ProteinID: XP_070558836
LinkDB
Position
6:complement(27597140..27606821)
AA seq 314 aa
MKLTDVVMRSFRVAKMFRDQNTDRINSVDFASNGDTLVSSSDDDSIVIYDCQEGKPKRTL
FSKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFHGHTKKVVSLSMSPVD
DTFLSGSLDKTIRLWDLRSPNCQGLMHLQGRPVCSFDPEGLIFGAGINSEMIKLYDLRSF
DKGPFTTFRLQADRDCDWTGLKFSADGKMVLISTNGAVIRLIDAFTGNPLQTFMGHMNSK
GLVLEASFSPDSQFVIAGSQDGKVHVWNAENGSKTAVLESKHGGPVQCVQFNPKYMMLAS
TSHDMEFWLPSIEE
NT seq 945 nt   +upstreamnt  +downstreamnt
atgaagctcacggacgtcgtaatgcgaagttttcgggtagcaaagatgtttagggatcaa
aacactgaccggataaacagtgttgacttcgcttcaaacggagacactctggtatcgagc
agcgacgacgactcgatcgttatttacgactgccaagaaggaaaacccaagagaacactc
tttagtaaaaagtacggagtagatttgatcagatacacacatgctgccaatactgtggtg
tacagctcaaacaaaatagacgacacaatccgatatctctcgctccacgataacaaatac
atcaggtattttcatgggcatacaaaaaaagtagtgagtttaagcatgtcaccagttgat
gacacattcctctcggggtcactagacaaaaccatcaggctgtgggatctcaggtcgcca
aactgccagggtttaatgcatctacaaggccgtccagtgtgttcatttgatccagaaggg
ttgatatttggtgcaggcatcaattcagaaatgatcaaactctacgacttgagatcattt
gataagggtccgttcacaacattcagactccaagctgacagagactgtgactggacgggg
ctgaaattcagtgctgacggtaaaatggtgctcatctcaacaaacggtgctgtcataaga
ctcatagacgcgttcaccggtaacccactacaaactttcatgggacacatgaattctaaa
ggtttagtactggaagcatcgttcagtccagactcacagtttgtcattgcagggtctcaa
gatggaaaggttcatgtatggaatgcagaaaatggcagcaaaacagctgttcttgagtca
aagcatggaggccctgttcagtgtgtccagttcaaccccaaatacatgatgttagcaagc
acctcacacgatatggaattctggcttccgagcattgaagagtga

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