Ptychodera flava: 139135820
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Entry
139135820 CDS
T10724
Name
(RefSeq) uncharacterized protein
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
pfll Ptychodera flava
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfll03041
]
139135820
Enzymes [BR:
pfll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139135820
Spliceosome [BR:
pfll03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
139135820
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
AAA_22
AAA_30
Motif
Other DBs
NCBI-GeneID:
139135820
NCBI-ProteinID:
XP_070559652
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All DBs
Position
6:complement(41093919..41104827)
Genome browser
AA seq
1044 aa
AA seq
DB search
MEGPRTAHNIHERQRTTDVLVRENVDFAGLLLTDVVQRGLANAGFERPSPIQLKAIPLGR
CGLDLIVQAKSGTGKTCVFSVIALESLQLDSNSTQVLILAPTREIAVQIQDVILSIGSAV
PKLRCHVFIGGLPLAQDKVKLQKCHVAVGTPGRIKQLIEEDCINTNTIRLFVLDEADKLL
DDKFKEQINWIYSALPDSKQMLALSATYPEYLAQQLTSYMRDPVFVRLNPKDLALQGLVQ
YCKVVPYHSVPHKQFDIKVQHLLKLLSQVTFNQCLVFSNYQTRAQNLSDYLCSKGWPSTY
IAGSQDQSQRLQAMSMLKKFQCRVLISTDLTARGIDAERVNLVVNLDVPYDSKTYLHRIG
RAGRFGTQGIAVTYTAQGAEYKQLQSIRRECHIAMKLIPETITSDFISKENTDSLEELSS
GDEDVETQKQNGFSALQNQVQPSRLTSKQQCDISAKDRQISKDTDTIMSSRKNISKNTTI
GQSTEVNSLLSVTSSHLSSFHDVTEGTLPRKSNGNTRYSHIANGIGHHREKTVEKIKKSK
KITSSKVRGRTQDTGCQTETVLDHTDLCLGVIKPLHIAMRKNKHSKLTVNYQNAVKDFKD
FLETQDTDFISWKRFYEQEDEEITNVTKRSDDDLMSSDVAVQGTQQLQSDADKVTCGRID
RNSHDTNDDIDTCDASVMNDHGITDYGRDLTGHRGLEFEEILAANTDKLSHLQVCDSDGM
KYGDNDTIITAVQSTPLNYEDSDKIKSSKSVSFLLQQCLNSDEEEAKSNDVTEVKDEKLR
RDIWDLQSLEKYNFAQQARHELSEGRISDMNDFQSVNTTKDSKVITKNIGSDDNDNEDDC
RANDKDYHRHDDVHSDDYDDDDDDDDDSDDDHDDDDDDDDDDVCDRNDEEIYEEEEWEDT
YYAKAGNYHSVPEFPNSQDQYQYYHTPYQYMYPNQNIYPYTAGQWNNDMYSAQHVPTESG
DQNGWPCYQTANEPYNDSEFQQPSSYGVPDTSQYGWEQPHSTGNSGDQMLEWYDPYLYQA
WVQAYQAQCYYNQFVAPPWQYGYW
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggaagggcctcgaactgcgcataacatacacgagcgacaaaggaccactgatgttctt
gtccgagaaaatgttgacttcgctggtttgttgttgaccgatgttgtccaacgaggtcta
gcaaatgctggctttgagagaccgtctccaattcaactgaaggctattccgctcggacga
tgtggtctagatttgattgttcaggccaagtctggtaccggcaagacttgcgtgttcagc
gtcatagctctggaaagcctgcagctggacagcaacagtacccaagtgttgatattggca
ccaactagagagatagctgtacaaattcaagacgtgatactgtcaattggaagcgctgtg
ccaaagcttagatgccatgtcttcattggaggtctgccccttgcacaagacaaggtcaag
cttcaaaagtgtcatgttgccgtgggaactccaggtcgaattaagcaacttatagaggaa
gactgtattaatacaaacacaatccgactttttgtcctggatgaagcagataaacttctg
gatgacaagttcaaggaacaaatcaattggatctactcggcccttcctgacagcaaacag
atgctagcactgtcggcaacctacccagaataccttgcacagcagctgacttcctacatg
agggaccccgtatttgtgaggttgaaccctaaagatctagctctgcaaggtctggtacag
tattgcaaagttgtaccatatcattccgtaccacataaacagtttgacatcaaagtccag
cacctactgaaactgttgagtcaagtaactttcaaccagtgtttggtcttttcaaactac
caaacaagagcccaaaacttatctgactacctatgcagcaaaggttggcccagtacctac
attgctggaagtcaagatcaaagtcaaagactccaagcaatgtccatgttgaagaagttc
cagtgcagagtccttatatccactgatctgactgccagaggcattgacgctgaaagagtc
aatcttgtagttaacttagatgtaccctatgattccaagacatacctacaccgcattgga
agggcaggcagatttggtacgcagggcattgcagtcacatatactgcacagggtgcagag
tacaaacaacttcagagtattcgccgtgagtgtcacatcgcaatgaagctaattccagaa
acaattacaagtgatttcatcagcaaggaaaacactgacagccttgaagagctttcatcc
ggggatgaagatgtagagacacaaaagcagaatggattcagtgctttacaaaaccaagtc
cagccaagcagactgacttcaaagcaacaatgtgacatttcagcaaaagataggcagatt
tccaaagatacagacactattatgtccagtagaaagaatatttcaaaaaatacaacaatt
ggacagtctacagaagttaatagtttgctaagtgttacctccagtcatttaagtagtttt
catgatgtcacagaaggtacgcttccacgaaagtccaatggcaacacccgctattctcac
attgcaaatgggataggacatcatcgtgaaaagactgttgaaaagatcaagaaaagtaaa
aaaattaccagttctaaagtcagaggtagaacacaagatactggctgtcaaactgaaaca
gttttagatcatacagatctgtgcctaggagttatcaagccattgcatatagctatgaga
aagaataaacactccaaactcactgtgaattatcagaatgcagtcaaagatttcaaagat
tttttggaaactcaggacactgactttatctcatggaagagattttatgagcaggaagat
gaagagataacaaatgtgacaaagagaagtgatgatgacttgatgagcagtgatgtggca
gtacaaggcactcaacaattacaatcagatgctgacaaagtaacttgtggaagaatagac
agaaactctcatgatacaaatgatgatattgacacatgtgatgcttccgtgatgaatgac
catggaattacagattatggaagagatcttacaggtcacagaggattggaatttgaagag
attcttgctgcaaacactgacaaattatctcatctccaagtttgtgacagtgatggcatg
aagtatggtgataatgatactataatcacagcagtacagagtacaccattgaattatgaa
gactcagataaaatcaagtccagcaaaagcgtatcgtttctgttacaacaatgtttgaac
agtgatgaagaggaggcaaagtcaaatgatgtcacagaagtcaaagatgaaaaactccgc
agagacatatgggatctgcaaagtttagaaaaatataatttcgcacagcaagctagacat
gaacttagtgagggaagaatctcagacatgaatgattttcaaagtgtaaatacaaccaaa
gacagtaaagtcatcacaaagaatattggcagtgatgataatgataatgaagatgattgc
agagctaatgataaggattatcatcgtcatgatgatgttcatagcgatgattatgatgat
gatgatgatgatgatgatgatagtgatgatgatcatgatgatgatgatgatgatgatgat
gatgatgtttgtgacagaaatgatgaagaaatctatgaggaagaggaatgggaggacaca
tactatgcaaaggctgggaattatcacagtgttcctgagtttcctaattcccaagaccag
taccaatattaccatacaccttaccagtacatgtaccccaatcagaatatttatccatat
acagcagggcaatggaataatgacatgtacagtgcacagcatgtaccaacagaatcaggg
gatcaaaatggctggccatgctatcaaactgccaatgaaccatacaacgacagtgagttt
cagcaaccgtcatcttatggagtgcccgatacaagtcagtatggatgggaacaaccacac
agcactggtaacagtggggatcagatgttagaatggtatgacccttacctataccaggca
tgggtacaagcttaccaagctcagtgctactataatcagtttgtagctccaccatggcag
tatggatattggtag
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