KEGG   Ptychodera flava: 139136888
Entry
139136888         CDS       T10724                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 3-like
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
pfll  Ptychodera flava
Pathway
pfll03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pfll00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    139136888
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfll03400]
    139136888
Enzymes [BR:pfll01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     139136888
DNA repair and recombination proteins [BR:pfll03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     139136888
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C zf-CCHH BRCT_2 Permu_RdRp_palm RNA_ligase Med27 mRNA_cap_enzyme BRCT
Other DBs
NCBI-GeneID: 139136888
NCBI-ProteinID: XP_070560833
LinkDB
Position
7:17092998..17134079
AA seq 1053 aa
MVAKLTSIPVYASRKVERIVTDWISRGQISCGCVQLTRFFHTFTREKSTVSSKSGLRTFS
TQKGFKSLKRHSDTFGSDTIGRFSLFTVILRRRPAFPAFCENYRIQRFYHTSPATMSVNR
YSCDYAKLGTSKCKKCKQAINKKEPRIAKIVPNPFSDDGSDMKQYYHISCMFETLSRARA
TTKKIEDPSDLEGFQNMEDEEKDTIKKHIRELAAKSSSPKKSPAKKAVQATITTTGLLQS
PTKKTPTKATPTKSPPKFDVDEGAGPSAQQDQDPMTKRDNSFRQFRRLCVDVAEESSYLG
KTKLVSTYIQKGNGGDGFKGDLYLLLRLLLPGAVKRVYNINNKQLIKLYSQIFGTSQDDM
LTDLEQGDVSETIRKYFEESTLLDPAKKSILSLQEVNAFLERMATMTKEDEQQRELRKIA
LKCTANDLKTIIRLLKHDLRINAGAKHILEALDPNAYEAFQASRNLKDVVDRVLENRESD
NGKPGMKKKLSVRASLMTPVLPMLAEACKSVEQAMKKCPNGMYAEIKYDGERVQVHKQGD
KFEYYSRSLKPVLPHKVAHFKDFLPKACPHGNSLILDSEVLLVDNKTGTPLPFGSLGIHK
KTAFKDASVCLFVFDCLHFNGENLMDKPITQRKKILRENLTEIPNKIMFTEAELITKPDD
LKGLIMRTIREGLEGLVLKDLKSVYEPGKRHWLKVKKDYLAEGAMADTADLVVLGAYYGT
GNKGGIMSXFLMGVHNPDTGKWCTVTKCSSGHDDKTLDQINKSLAVTKISKDFGKVPGWL
KINKSLVPDFVVKDPKNAPVWEITGAEFSHSDTHTADGISIRFPRCTKVRDDKSWEEATN
LPRLKLLYKKSKEHSDIPDMIGGTSKLKRSDEDNNSGVTSMSPFKGKAKKAKTDSNGEVA
SPSPSKGKALAKRKRETEYNEDEDTEEDEPALKKRTPCKYGPDCYQTNPKHLEQYNHSRK
TAAKSPRKGVTPSKHLPDVFTGMQIYLPKSTSRHDLLKRYIIAFDGDVVADYDKDMATHI
CDDSDDKKNINSDKHVTSDWLWECIKHKKLVPK
NT seq 3162 nt   +upstreamnt  +downstreamnt
atggtagcaaagctcacgtcgattccagtttatgcatcccggaaagttgaaaggattgtg
actgattggatctcgcgtggacagataagttgtggatgtgtacagcttacaagattcttt
cacactttcaccagggaaaagtctacggtatccagtaaatccggtttgagaaccttctca
acacagaaaggtttcaaaagtttgaaaagacactctgacacatttggatctgataccatc
ggcagattttctctgttcacagttatattgagaagacgccctgcatttcctgctttctgt
gagaattatcgcattcaaagattttaccacacatcaccggccacaatgtcagtcaacaga
tactcctgtgactatgccaaacttggaacatctaagtgcaagaaatgcaagcaagccatc
aacaagaaagaacccaggatcgccaagattgttccaaatccattctctgatgacggaagt
gacatgaagcagtactaccacatctcgtgtatgtttgagacgctgtctcgcgcgagggcg
actacaaagaagattgaggatcccagtgaccttgaaggattccagaatatggaagatgaa
gaaaaggataccatcaagaaacacatcagagaattggcagcaaagagttcatctccaaag
aagtcaccagcaaagaaagccgtccaggcgacgatcacgaccactggcctattgcagtca
cctacaaaaaaaacacctaccaaagcaactcccacaaaatctcctcctaagtttgatgtt
gatgaaggtgccgggccgtctgcacagcaagatcaagaccccatgaccaaacgcgacaac
tcattccgacagttccgaaggttgtgtgtagacgttgctgaggagtctagctatctcggc
aaaacaaaactggtttctacatatatccagaaaggcaatggaggggatggctttaaagga
gatctgtatctgttgctacggctcctgttgccaggtgcagtgaagagggtgtacaatatc
aacaacaagcaactcatcaaactttacagtcagatatttggaaccagtcaggatgacatg
ttgacagatcttgaacagggtgatgtctctgagacaatccgtaaatattttgaagaaagc
acgctgcttgacccagcaaagaagagtattctgtcactacaagaggtgaatgcctttctg
gagaggatggccaccatgaccaaggaggatgaacagcagagagagctgaggaagattgcc
ctgaaatgcacagcaaacgatttgaagaccatcatccggttgttaaagcatgacttgaga
atcaacgcaggggccaaacacatattggaagcgcttgatccaaatgcgtacgaggcattc
caggcatcaaggaacttgaaggatgtcgttgatagggtacttgaaaacagggaaagtgat
aatggaaagcctggaatgaagaagaagctgagtgttagagcatcactgatgacaccagtg
ttgccaatgttggcagaggcatgtaaatcagttgagcaggccatgaaaaaatgtcccaat
gggatgtacgcagagatcaagtacgatggtgaaagagttcaagttcacaagcaaggtgat
aaatttgagtactacagcagaagtctgaagccagtccttcctcacaaagtcgcccatttt
aaagatttcctgccaaaagcttgtcctcatggaaacagtctcattttagacagtgaggtt
ttgttagtcgacaacaagacaggaactccactgccattcggttcacttggaatccacaag
aaaacagccttcaaagatgccagtgtgtgtttgtttgtgtttgattgcctccacttcaat
ggggaaaatctgatggacaaaccaattacccaacggaagaagatactgagagaaaacctg
actgaaattccaaacaaaataatgtttacagaggctgaactgattacgaaacccgatgat
ctgaaaggtttaatcatgagaactatcagagagggattggaaggacttgttttgaaagac
ttaaagagtgtctatgagccaggaaagagacactggttaaaagtgaagaaagattactta
gctgagggtgccatggctgacactgcagaccttgtggttcttggggcatactatggtaca
ggaaataaaggaggcatcatgtcgnattttttgatgggagttcacaatcctgacaccggc
aagtggtgcaccgtcaccaaatgcagcagtggacacgacgacaagacactcgatcagatt
aacaagtcacttgcagtgacaaagatcagcaaggactttggcaaagttcctggctggctg
aaaatcaacaaatctctggtgccggactttgtggtcaaagacccaaaaaatgctccagtg
tgggagattacaggtgctgaattcagtcattcagatacgcacactgccgacggcatatcc
atccgattcccccgctgtaccaaggtccgtgatgacaagtcatgggaggaagcaacaaat
ttgcccaggctaaagttgctgtacaagaaatccaaggaacactcggacatccccgacatg
atcggagggacgtccaaactcaaaagatcagatgaggacaacaacagcggtgttacttca
atgagtccgtttaaaggaaaagccaagaaagcaaagacagacagcaacggggaggtggct
tcacccagcccatcaaaaggaaaagctctagccaagaggaaacgagagacagagtataat
gaagatgaagatacagaggaggatgagccagctctcaagaagagaactccttgcaagtat
ggacctgactgctaccagacaaaccctaaacatttagagcagtacaaccactcaaggaaa
acggctgcgaaatcaccaaggaagggtgtcacaccctccaagcatttgccagatgttttc
accggtatgcaaatttaccttcccaagtcaacgtcccgccacgacctgctgaagcgctat
attatcgcctttgacggtgatgtcgttgccgactacgataaggacatggcaactcatata
tgtgatgatagtgatgacaaaaagaatataaattcagacaagcatgtgacgtcggactgg
ctatgggagtgtatcaagcacaagaaactggttccaaagtag

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