Ptychodera flava: 139137100
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Entry
139137100 CDS
T10724
Name
(RefSeq) exosome complex component 10-like
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
pfll Ptychodera flava
Pathway
pfll03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
pfll03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
139137100
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139137100
NCBI-ProteinID:
XP_070561163
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Position
7:25577926..25662704
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AA seq
878 aa
AA seq
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MAEERNKHESTTGQDQSGSSESEPLFGDYSDVNSYAQKALGTFLQATKCSNSLPAAGDDY
EYYSSFDSIRDFYHDNSRRLLDNITDIIRHQGIRGSIREGSKAVEIEDKMDVITEANDII
LERVGTMLDEASGINKNSKPVLPPGARGNIVISSWNRKTHDRSKSETFRLLHAKNIQRPQ
LKFKEKVDNSNMPFIPLLKSKPNAKKPLERVESSEDTAIPAALSNFLHQQRQEQESGSSF
DITAHPYQYELDHFQPSPSQLESSEPQMYKSLEDTPLKIITSFDQLQELSDLLNKQTEFA
VDLEAHTYRSFQGFTCLMQLSTRDEDFLVDTIELRSDLHILNESFTNLDIVKVFHGADSD
IGWLQRDFGIYVVNLFDTGQASRVLSFAHYSLAHLMNHYCGVQANKQYQLADWRIRPLPE
ELVKYAREDTHYLLYIYDKMRNELIEKGNAQKNLLRSVIERSTMVCLKKYQKPLFTENSH
EYLYKKNRKSFNSQQMHAFKRLYAWRDRIARQEDESTGYVLPNHMMFQIAEILPKEAQGI
LACCNPIPPLVRQHMNELHQFIMMARNKPLQKRVETPQKEEEDRKVKDVRKESYLNCPHD
LSHLSAARSVEMTDAAPMSSHSALFGDNDDDIRPPAVCVAEPIISIFGYPSDDRQAASRN
TAQKKVERIKALFVSPFEKYLPDSKLKQISVSLLEANKITLQNPSQVGTNTSTEHISEAT
DMWKLKPPTLPKEKIEVQPVNQLQSQKRSRDEQTEDSAISIREQKRQKTDSSEKGEQEAE
HNKEIAKDKSEKESGKKPAERKDERPFHPFDYSKVNYKVFQEDEKKKKKKKCNPHSQIGG
PSFQNAPKSRTAPSSGARSMTSGHKAGSHHKKQHWPKR
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagagagaaacaaacacgaatctacaacagggcaagaccaatcgggctcttcg
gagagcgagccgttgtttggcgactattccgatgtcaactcgtatgctcagaaagcccta
ggaacatttcttcaagccactaaatgctccaacagtctaccagcagctggcgatgactat
gagtactattccagttttgacagtatccgggatttttaccatgacaacagcaggcggctt
ctggataacatcactgacataatcaggcaccaaggtatccgcggcagcatcagggaaggc
agcaaagccgtggaaattgaagataaaatggatgtgatcacggaagccaatgatatcatt
ttggaaagagtggggacgatgttggatgaagcgtccggaatcaacaagaattccaaacca
gtactgccacctggtgccaggggtaacattgtcatctcaagttggaatcgaaagactcac
gatcgaagcaaaagtgaaacgtttcggttgttgcatgctaaaaatatacagcgaccgcag
ttaaaatttaaagagaaagtggacaatagcaacatgcctttcataccgctgctgaagagt
aaaccaaacgccaagaaaccactcgaaagagtggagagttcagaagatacagcaatccca
gcagccctatcaaatttcctccatcagcagagacaagaacaggagagtggatcatcattt
gacataactgctcatccgtatcagtatgaacttgaccacttccagccgtccccatctcag
ttggaatccagtgagcctcagatgtacaaatctttggaagacacaccattgaaaataatc
acttcatttgaccagcttcaagaactcagtgacttgttgaataagcagacagaatttgct
gtcgatctagaggctcacacgtaccgtagtttccagggtttcacttgcctgatgcagctg
tccacgcgggatgaagatttcctggtcgacaccattgagctgagaagtgatttacacata
ctcaatgagtcatttacaaatctggatatcgtcaaggtgttccacggcgctgacagtgac
ataggttggttacagagagattttggcatctatgtggtgaatttgttcgacacgggacag
gcatctagagttcttagttttgctcactactccctggcacatctgatgaaccactactgc
ggtgtgcaagctaacaaacaatatcagctggctgattggaggataaggccgttgccggaa
gagcttgtgaagtacgcaagagaggacacgcattatcttctgtacatctatgacaagatg
agaaatgaactgattgagaaaggaaacgctcagaagaatctgttgagatcggtcatcgag
agaagcaccatggtgtgtcttaagaaatatcaaaaaccactcttcacagagaattctcat
gaatacttgtacaaaaagaacaggaaatctttcaactctcaacagatgcatgcatttaaa
cgactctatgcctggagagatagaattgccaggcaggaggatgagagcactggatacgtt
ctgccgaatcacatgatgttccagatagcggagatactgccaaaggaggcccagggaata
ctggcgtgctgcaatcccatcccaccactagttcgacaacacatgaatgaactacatcag
ttcatcatgatggcaagaaacaaacccttgcagaagagggttgaaaccccccaaaaggaa
gaggaggacagaaaagttaaagatgtcagaaaagaaagctatcttaactgcccacatgat
ttgtctcatctgtctgcagcaagaagcgttgagatgacggatgctgcaccaatgagcagc
cactctgccttatttggtgacaatgatgatgacatcagaccccctgcagtgtgcgtggct
gaaccaatcataagtatatttggatatcccagcgatgaccgccaagcggcatcacggaac
accgcccagaagaaagtggaaagaatcaaagctttatttgtcagcccttttgaaaagtac
ttgccggacagcaaattgaaacagatatctgtgtctctgttggaagccaataaaataaca
cttcagaacccctcccaggttggaaccaacacaagtactgaacacatctcagaggccaca
gacatgtggaagctgaaaccgccgaccctgccaaaagaaaaaattgaagtgcagcctgtg
aatcagctacagagtcaaaagagaagcagagatgaacagacggaagactcagcaatatcc
atcagggaacagaagaggcaaaagacagactcgtcagagaaaggagaacaggaggcagaa
cacaacaaggaaattgcaaaagacaaatcagagaaagaaagcggcaagaaaccagctgaa
cggaaagacgagagacctttccatccatttgactacagtaaagtcaactacaaagtgttt
caggaggatgaaaagaagaagaagaaaaagaaatgtaatccacacagtcagataggtggt
ccatcatttcagaatgcgcccaaatccagaacagcgccctctagtggtgcacgcagcatg
acctctgggcacaaagctggaagccaccacaagaagcaacactggccaaagagatag
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