Ptychodera flava: 139137741
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Entry
139137741 CDS
T10724
Name
(RefSeq) ubiquitin conjugation factor E4 B-like isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
pfll Ptychodera flava
Pathway
pfll04120
Ubiquitin mediated proteolysis
pfll04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139137741
04120 Ubiquitin mediated proteolysis
139137741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pfll04121
]
139137741
Enzymes [BR:
pfll01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139137741
Ubiquitin system [BR:
pfll04121
]
Ubiquitin ligases (E3)
U-box type E3
139137741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
WASH-7_C
Motif
Other DBs
NCBI-GeneID:
139137741
NCBI-ProteinID:
XP_070562105
LinkDB
All DBs
Position
7:47189125..47240155
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AA seq
1167 aa
AA seq
DB search
MNELTPDEIRRRRLARLGGGTNSGSASESGSQPGTPSVQGIPTADSSPNTILSPTHKDTP
SSKTPSRNTSQSESQAKRTLDMAENTSSKASPSLSRSQDCQPMDTSSFSQSMEMETDSTD
KSTLSQMDVDSGIDTQEMEDTERKDKRMFGQKEGSMSGEVTEDQLLAVICRIFRVSWKEK
GRDVIFLPQLAVDFKNDDSKQVFLDLKDLISQVMMEVLTHLCSSKNKLPSLSASVHPRLS
SSPTKNYASRPQGYGFTLPRTAHPVPESGKELFNIESCRETEMLNYLMECFDRVSMEEKN
APKRCSQPPLSLVFAEIRRQCASHAGLVLQGFYTQHRLTTRPSLIVPYLLCRVLPRGFLY
ELVHVTSQDQQTFHDVFTPILIGLMQGIQRCGLDCDNFKYPLYALTEMCEIKLGSQRPIC
NLMTSLPYWLPKPITNAEGREFQRLSLLGNFFGLSVFAEDDNKVVDKFFSGPMSNDNTVK
LINASLQNSLETVRSELFKVLHSVLVNSDSRENGLSYIAAAINRNQKKSQMQADDSLLCN
DGFMLNCLYVLQQLSLKIKLDKVDPMYLHHPKCRLDVSQDSRLKATSPEVTEWRKKLNED
PSIWTDPKFTTECYYLTLHCHHLALLPCTRHYSRRLRALRELGRMIEELQSQESTWRYTS
TDKRNRQLIEKWRSQQKKLLRSKMCSDAGLLDESLMRRSLTFYGSVVKFLTNVMTKQTGQ
EITLPLPQEVPMEFATLPDYYAEDIAEFLLFILHHMPQVLDDTYLPDIVLFIVLIVCSPN
YLSNPYLVAKFVELLFVVNPAIQDRTRHVHDMIVNQPLGAIHLAPALMRFYTDVESTGSS
NEFYDKFSIRYHISVIFKSLWNMPLHRQAIVTESNSGKDFVRFVNMLMNDTTFLLDESLD
CLKRIHEVQEIMKKEEWKRMTQDEQQEKRQQLSTDERQVRSYLTLAGETLDMFHYLTRTI
QEPFLRPELASRLAAMLNFNLQQLCGKKCNDLKVENKEKYGFEPKKLLNQLTDIYLHLDC
RKFAEAIAADERSYRKEVFDDAVSVMTRAVIKAESEIKKFRDLANLVEEIVISNMKRDID
FEDAPDEFKDPLMDTLMTDPVLLPPSGSVMDRPIIERHLLNSSTDPFNRQPLTSEELVSM
PELKQKIQQWMKQKQQEKRSQEQEQTQ
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagctaactccagatgagatccgacgacggcgacttgcacgtcttggaggaggt
acaaatagtggcagtgccagtgagagtggttcacagccgggcacaccatcagtacaaggt
atacctactgcagactcatctcccaataccatcctatcaccaacacacaaggatacacct
tcttcaaagacacctagcagaaacacgtcacaaagtgaaagccaagctaagcggacatta
gacatggctgaaaatacatcctcaaaagcctcaccatcattgtcacgttcacaggattgt
cagcccatggacacaagtagtttttcacaatccatggaaatggaaactgattctacagat
aaaagcacattgtctcagatggatgttgactcaggaattgacactcaagaaatggaagat
acggaaagaaaagacaaaagaatgtttggtcaaaaggaaggaagcatgagtggcgaggta
acagaggatcagctgctagctgtcatttgtcggatattccgtgtttcttggaaagagaaa
ggtcgtgatgtcatattccttcctcagctagcagttgattttaaaaatgatgactcaaaa
caagtgtttttagatttaaaagacttgatcagtcaagttatgatggaggtgttaacacat
ctttgctccagtaaaaacaagttaccaagtctcagcgccagcgtccatccaagattgtct
tcatcaccaactaaaaactatgcctcaaggcctcaagggtatggttttacattaccaagg
acggcacatcctgtcccggaatctgggaaagaattatttaacattgaatcgtgcagagaa
acagaaatgttgaattatttaatggaatgttttgacagagttagcatggaggaaaagaat
gcccctaagcgatgcagtcagcctccgttaagtttggtatttgctgaaataaggagacag
tgtgccagccatgctgggctagtcttgcaaggtttctacacacaacacagattaacaact
cggccatctctgattgtaccctatttactgtgtcgggttttaccacgaggatttctgtac
gagttagttcatgtcacaagccaagatcaacagacattccatgacgtattcacaccgata
ttgattggtttgatgcaaggtatacagagatgcggattggattgtgataatttcaaatat
cctctttatgcattgactgaaatgtgtgaaataaagttaggatcacaacgtccaatatgc
aatctaatgacatcactgccttactggttgcccaaaccaatcacaaatgcggaaggaaga
gaattccaaagactttctttattaggcaatttttttggcctttcagtctttgctgaagat
gataacaaagtggttgacaagtttttctctggtccaatgagcaatgacaatactgtaaaa
ctgatcaatgcatcattacagaattcactggagacagttaggtctgaattatttaaagta
cttcacagtgtattggtcaattctgatagcagagagaatggtctaagttatattgctgca
gccattaataggaatcagaaaaaatcacaaatgcaggcggatgatagtctactttgcaac
gatggatttatgttgaattgtctctatgtgttgcaacagctgagtctcaaaataaaactt
gataaggttgatccaatgtatttacaccatccaaagtgtcgactagatgtttcccaggat
tcaagattaaaggcgacttcaccagaagtgacagaatggcgcaaaaaactcaatgaagat
ccgtcaatttggacagatcccaaatttaccacggaatgttattacttgactttacattgt
catcatctggcattgttgccttgtaccaggcattacagcagacgattgcgagcacttcga
gagttaggacgaatgattgaagaattacaatctcaggaatccacctggagatacaccagc
acagataaaagaaacagacaactcatagaaaaatggaggtcacaacagaagaaattgctg
cgctctaagatgtgttcagacgctggactacttgacgaatcactcatgagaagaagtctg
acattttatggtagtgttgtcaaattcttaacaaatgtaatgacaaagcagacaggacag
gaaattacacttcctctaccacaagaagtaccgatggagttcgccacacttcctgactat
tatgcagaagatattgcagagtttttactctttattcttcatcacatgcctcaagtatta
gatgatacctatctgccagatattgtgttattcatagtgctcattgtgtgctctccaaac
tatctcagcaatccatatctcgtggcaaagtttgttgagcttttgtttgtagtgaatcca
gcaatccaagacagaactcgtcatgttcatgatatgattgtcaatcagcccttaggggca
attcacctagctccagctctgatgagattttacacagatgttgaatccactggcagtagc
aatgaattctatgacaaatttagtattcgatatcacatcagtgtcatattcaaatcactt
tggaatatgccccttcacagacaggcaattgttacagaaagcaattctgggaaggacttt
gttcggtttgtcaacatgctgatgaacgacacaacattcctgttggatgagagtctggac
tgccttaagagaattcatgaagttcaagaaatcatgaaaaaagaggaatggaaacggatg
acacaggatgaacaacaagaaaagagacaacagttgtcgacagatgaaagacaagtcaga
tcgtacttgacattggctggtgaaacattggacatgtttcattaccttacaaggacaatt
caagaacctttcttgagaccagaacttgccagtcgtctggcagccatgttgaactttaac
cttcaacaactatgtggaaaaaagtgcaatgatttgaaagtggaaaataaagagaaatat
ggttttgaacccaagaagttgctcaatcagctgaccgacatttaccttcatcttgattgc
agaaagtttgcagaagccatagcagctgatgagcgttcctatcgtaaagaagtatttgat
gatgcagtgagtgtgatgactagggctgttatcaaagcagaatctgaaatcaaaaagttc
cgtgatctagccaacttggtagaagagattgtgatcagcaatatgaagagagacattgac
tttgaagatgcaccagatgaatttaaagatcctctgatggatacattaatgacagatcca
gttttattgccaccatctggatctgtgatggacagaccaatcattgaaagacatttattg
aattcatccacagatccattcaatagacagcctcttacttcagaagagttagtttcaatg
ccagagttaaagcagaagatccaacagtggatgaaacagaaacaacaggagaaaagaagc
caagaacaggaacaaacacaatga
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