Ptychodera flava: 139138830
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Entry
139138830 CDS
T10724
Name
(RefSeq) WD repeat-containing protein 18-like isoform X1
KO
K14829
pre-rRNA-processing protein IPI3
Organism
pfll Ptychodera flava
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfll03009
]
139138830
Ribosome biogenesis [BR:
pfll03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
139138830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_NWD2_C
WD40_alt
WDR54
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
139138830
NCBI-ProteinID:
XP_070563477
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Position
8:23720823..23741589
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AA seq
430 aa
AA seq
DB search
MAAPIEVVVSSEISGQMWNSCVWDPHNGTTLTTYKGGSSAPRTLGFLGKDYIISGVNNHP
LIHVWALHRQEQQQMRIVCPGLVTALATSPCGNYCAAGIAERIHVWHVSTGKLVAILSRH
YQNITCLKFTDDGSCLISGGNDSLVLVWSMASILQSHNGISARLEPLYVSSNHSLPVTDI
YCGCGGPLARVVSSSLDQTCRLWDLSSGQELCCFVYDVSITSVTMDTAEYRLFAGGINGS
IYQINLFSQEQVKGRVVISESETADDEGKTQTFVRHSKQVNCLSVSIDGTMLLSGSHDCT
VVLWDIASRQCIRVLNHKGIVTNAMFTQAPIQMFSTVNKTAMPIKPFQRSSQTDSDGKTH
SLDMRIKHSIQLESEDMSVTQRRLQECLQGMTDTDRVTTSQLQEECRQLQTANKNLFKFA
VKELLTHSQS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccccatcgaggtggtcgtgagcagcgaaatttctggacagatgtggaattcc
tgcgtttgggacccacacaatggaacgacactaaccacatataaaggcggcagcagtgcg
cctcgtactttaggtttcctaggcaaagactacatcatatcgggtgtcaacaaccatcca
ctcatccacgtgtgggcattgcacagacaggagcaacaacaaatgaggatagtatgtccg
gggttggttacggcattggcaacgtcaccgtgtggtaactactgtgcagctggtattgca
gaaagaatacacgtatggcatgtaagcactggtaaacttgtagcaatactcagccgacac
taccagaatataacatgtctgaagtttacagatgatggtagctgtctaatatcgggtgga
aatgatagtttggttttggtctggtcaatggccagtattctgcagagtcataacggtatc
tctgcaagactggaaccactgtacgtctcgtcaaatcactccttacctgtgacagacatc
tactgtggttgtggaggaccattagcaagggtggtgtcatcgtctttggaccagacatgc
aggctttgggacttgtcatcaggccaggagctatgctgcttcgtctatgatgtcagcatc
acatctgtcaccatggatacggcggagtatcgattatttgctggtggtatcaacggcagc
atttaccagatcaacctcttcagtcaggaacaggtgaaaggtcgtgttgtcatcagtgag
agtgaaaccgcagatgatgagggaaaaacacagacatttgtcaggcatagtaaacaagtg
aactgtctgtcagtgtctatagatggcaccatgctactctccgggtcacatgactgcacc
gtagtattatgggatatagccagcagacagtgtataagagttctcaatcacaaaggtatt
gtcaccaatgccatgttcacacaagctcctattcagatgttcagtacagtgaacaaaaca
gctatgcctatcaaaccattccagagaagttcacagacagacagtgacggaaagacacac
tctcttgatatgagaattaaacactctattcagctggaatctgaagacatgtctgtcaca
cagagaagactgcaagagtgtcttcaagggatgacagacactgacagagtgacgacatca
cagctgcaagaagaatgtcgccaattacaaacagctaacaagaatctctttaaatttgct
gtcaaagaattgctcacacactcccaatcctaa
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