Ptychodera flava: 139138883
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Entry
139138883 CDS
T10724
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B-like isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
pfll Ptychodera flava
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfll03021
]
139138883
Transcription machinery [BR:
pfll03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
139138883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_N
Rrn7_cyclin_C
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
139138883
NCBI-ProteinID:
XP_070563560
LinkDB
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Position
8:complement(25723491..25737263)
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AA seq
702 aa
AA seq
DB search
MPAVCNNCQAVDDFYAKDGFYFCGECDTQSQDVRDIQQEEDFVQSRQLSMLQIKKSALPG
IDSKTVDRGKPWFTFEAFQHIIKEQVNCLLKIGVSPKLKEVVRQLWFGYLKTSGVAFTGK
DEKAEVIFDSVFARTRDKHPGSVDDPDIRPPAGTLKRKRHSSASSAKSASSASESDLPDW
VPTEDFYPGDNPFENSSSGGDTSSSDEDQDTDVGSVGSVDHKVKAKRKRLPIQVMTMDLT
VCFLYLALLLLGEPVLLCDLMRWIHEGHVPYAAANKILPNHMKFSYMDSSTFCVGVVPSV
VTIRHKAGRLAHYLRLPPLPAINVNKITSRFILELHLPDEFHGYLRNLASKGGSDLESTI
ITRQQRLLFYEGIAMAYIIVALKMLFTLDDSKEHVISAEARRLQKSLPQGVDLFIWDDWV
KFMKARINFHRSRSCRKPSSHSDIRNRVDIKPYILNYNEVISKWKGLYTIKQQKKCRAKR
EVTIKERKKPFHALQEALGEKQTEMPKMSSFCHPRIECEDGERGDRDSVKEEVDQDEWKF
SSCTLQYIINRDLFLQKFENELLPQSYDRSSDCNDLAESMSGDWTGEEEVSDYGNLTQDL
NERLWDSDDRGRTSQLLAGLKRHRSYVTYPDYRVIHVKSGGKFSDENDEFHHSYKWLLDV
CAEILETKVHDLHDQVIKVEKMLRITGTSRSKNDFMTDSDEG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagtgtgtaacaactgccaagctgttgacgatttctatgccaaagacggcttc
tacttttgcggagaatgtgacacgcaaagccaggacgtcagagacatacagcaggaggag
gattttgtacagtctcgccagttatcaatgttacaaatcaagaaaagtgccttgcctgga
attgacagtaaaactgttgacagaggcaagccctggttcacatttgaagccttccaacac
atcatcaaagaacaagtcaactgtctgctcaagataggagtatccccaaaactcaaggag
gttgtacggcagctgtggtttgggtacctgaaaacaagcggtgttgccttcactgggaaa
gatgaaaaagcagaagtcatttttgacagtgtgtttgcaaggacaagagacaagcaccca
ggaagtgttgacgatcctgacattcgaccgccagcaggcaccttgaaacgtaagcgccat
tcaagtgcctcatcagccaagtcagccagctcggcctctgaatcagatttgccagactgg
gtgccaacagaagatttttatcctggagacaatccgtttgaaaattcatcaagcggtggc
gataccagcagcagtgatgaggatcaggatactgatgtagggagtgtgggatcagtggat
cacaaagtcaaagccaagaggaagagactacccatccaagtgatgacaatggatctcacc
gtctgttttctgtatcttgctctcttgttgctaggggaaccggtcctgctctgtgatttg
atgagatggattcatgaaggccatgtgccttatgccgcagccaataaaatcctgccaaat
catatgaagttttcatacatggacagcagtaccttttgtgttggggtcgtaccatccgtt
gtcaccatcagacataaagctggacgtctcgcgcactatcttagactaccccctctaccg
gccatcaacgtcaataaaataaccagcagatttatcttagaacttcatctcccagatgag
tttcatggatatttgaggaacctggctagcaaaggaggttcggatcttgaaagcacaata
ataacgcgtcagcagaggctgttattctatgaaggtatcgcgatggcgtacatcatcgtt
gccctgaagatgctcttcactctggacgacagtaaagagcatgtcatttcagcagaggct
agacgtcttcagaagtcactgccgcaaggtgtcgacctcttcatctgggacgactgggtc
aagttcatgaaagccagaatcaactttcacaggtcgaggtcatgcagaaagccaagttca
cacagtgatatcaggaaccgcgtggacataaagccctatattctgaactacaatgaagtt
ataagcaagtggaaagggctgtataccatcaaacaacagaaaaagtgtagagctaaaaga
gaggtgacaataaaagagcgaaaaaagccgttccatgctctccaggaagcccttggtgag
aaacagacagagatgccaaaaatgtcttcattttgtcatcctcgcatagaatgcgaggat
ggggaaagaggagacagggacagtgtcaaggaggaagtggatcaggacgaatggaagttt
tcttcatgtacattgcagtacatcataaaccgagacctctttctgcagaaatttgaaaat
gaactcctgccacaaagttacgacaggtcaagtgactgtaatgacctggcagagagcatg
tcgggtgattggactggtgaagaagaggtgtctgactatggaaatctgactcaagaccta
aacgaaaggttgtgggattcggacgacagagggcgcacttcgcagctcctggcaggctta
aaaaggcacaggagctatgttacttacccagattatagagtgattcatgtgaagtctggt
ggaaaattcagcgatgaaaatgatgagtttcaccactcctacaaatggctgcttgatgtt
tgtgctgaaattttggaaacgaaagtccatgatctacatgatcaagtgatcaaggtggaa
aagatgttgagaattaccggtacctcaagatctaagaacgatttcatgacggactctgat
gaaggataa
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