Ptychodera flava: 139138970
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Entry
139138970 CDS
T10724
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pfll Ptychodera flava
Pathway
pfll03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
139138970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfll03021
]
139138970
Enzymes [BR:
pfll01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
139138970
Transcription machinery [BR:
pfll03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
139138970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
DUF2780
Motif
Other DBs
NCBI-GeneID:
139138970
NCBI-ProteinID:
XP_070563725
LinkDB
All DBs
Position
8:29036796..29102939
Genome browser
AA seq
1744 aa
AA seq
DB search
MIKSIPSKRLCGIRFTNLSTEEIKRLSVKEITNQATFDNLQHPSCGGLYDSALGPADRDD
VCSTCSLNFLHCPGHFGHISLPLPVYNPLFFRLLVQILKGACLNCHHLLADRVSLLLIKA
QLQCLEYGLLSVVDDLENIVREFSISHDGATTSTVSAIDTALQKYVDQAIQGINKKEASK
NAKVRNVTECKQHLITNFRTNQLQHRAKCGLCKKRVQQLRTEHNSKIYFKKGSRRSTIRK
ASVAKKTQQQEGNAQEEESANNQANKEPTDLLSDVSEQVYLTPQNAREHMKLIVENEGSI
LRHLFGALAEDENSENPNSLDVFFLEVIPVPPSRFRPISKVGDKRFENPQTANLNHVLTN
SITLALILDIVKQDEETQTTVEDDTAVPVERDESVLARVLGKSKVEKLHNAWINLQTRVN
CLIDSSLDKLNTDKHPGIRQLLEKKEGLFRKHMMGKRVNYAARSVISPDPNIATDEIGIP
EVIATKLTYPQPVTPWNVKELRQAVINGPNVHPGALIVENEDGSKTLLRAGNTTQREAIA
KQLLTPNTTLGVASSKKVHRHVKNGDILLLNRQPTLHKPSIMAHRAHILPGEKTLRLHYA
NCKSYNADFDGDEMNVHFPQNEVGRAEAYDIMTTNNQYLVPKDSTPLSGLIQDHMVSGVR
ITIRGRFFNRQDYQHLVYSALTDKHGPVKLLPPTIRKPCILWSGKQVFSTLLLNIIPDDK
EPLNYTGKAKISGKHWETHKARPFAAGGTALIDDDMSESEIIVRHGQLLCGVLDKAHYGP
TPYGLVHCCYELYGGKVSGRLLTCLGRLFTSFLQTISGFTLGVEDILVTAKADRKRRKLL
NKAEGYGPAVAAKALGVEDATDSAVLLEKLEDAHRNLSGNDMREIDLCMKSTTDEVTNDV
NKVCIPRGLQKTFPDNNLQLMVQAGAKGSQVNCMQISCLLGQIELEGRRPPLMISGRSLP
SFLPYDTSPRAGGFVDGRFLTGIRPQEYFFHCMAGREGLVDTAVKTSRSGYLQRCLIKHI
EGLVVGYDLTVRDSDGSIIQFQYGEDALDILKTPFLREKQFPFMIANHTALLDEKHLGQI
SQKLSTNDVKEIQHKIKKWEKRHGNWEGQKMVKPFAYFAYKKSDKVKAEIADTETNEMEL
KKKTKEKLSELWRTTSDKQKYSKHCGRCPDPVLSQLQPDLHFGNTSEKFTKMVESYISAN
PHRLLCTQKDVSNTRLTADQFRTMMNMKYLTSLCHPGEAVGLLAAQSIGEPSTQMTLNTF
HFAGRGEMNVTLGIPRLREILMVGSQNIKTPSMSIPVLPSHKAHKRAKKLKKKLTRVYLS
EVLEKVNVTEMYEVKGSGMKYRIYTIKLTFLPQDCYKEDSDLTPEDVVNYVERKFLKRLV
SAIKQKIKQIINTRIVDSKTRSSVLNDDLEDAVDERPNRGNKGEDEDSEDEGDESDAVAR
KRRQQRMDDMEYEEGGDEEEEDVEEEMEQSDEEEGQKTQSNDEEEGEKEEGGEEDKDKTS
APSVEVKKSKKKKKTEIVHDDDDKRISAVYSISDLIFDYKYDTEDDLWCSVSLRLDIVDS
KMDICSVVENEAKKSIVLQTPGITRCFLQDSTVPDDASHKILQIEGVNIMEMFWYDKILN
LRRLYSNDIHAMANTYGIEAARRVLIKEIQEVFKAYGIHVDSRHLTLIGDYMTFDGVYRP
FNRFSLRSNSSPLQKMSFEQSMTYLKEATVDGSCDQLKSPSARLVVGRVVTGGTGSFDLI
QPLR
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atgataaagtctattccctcaaagcgtctttgtggtatccgatttaccaacctgtccacg
gaagagatcaaacgtcttagtgtgaaagaaataacaaaccaggcgacatttgataacttg
cagcatccgtcctgtggaggactttatgattcagcattaggtccagcagatcgtgatgat
gtttgcagtacatgttcattaaactttcttcactgtcctggtcactttggtcacatctct
ctgcctttgcctgtctacaacccattatttttcaggctacttgtacagatcttgaaagga
gcctgtctcaactgccatcatcttctggcagacagggtgtctcttcttctcatcaaggct
caactccagtgtcttgagtatggtctactttcagtagtagatgaccttgagaatatcgtc
agagagtttagcatcagccatgacggtgctaccactagcactgtgtcagccatcgatact
gcactacaaaaatatgtagatcaagctatacaaggtattaacaagaaagaggcgtctaaa
aatgcaaaggtgagaaacgtcacagagtgcaaacaacaccttataaccaacttccgtaca
aaccaactgcagcacagagcgaagtgtggactctgtaaaaaacgtgtgcagcaactcaga
actgaacataacagcaaaatttacttcaagaaaggcagcagacgatctaccatccgcaaa
gcttccgttgcaaagaagacacaacagcaagaagggaatgcacaggaagaggaaagtgca
aacaatcaagcaaacaaagagccgacagatcttttgtcagatgtgtcggaacaggtttac
ctgacaccccagaatgccagggaacacatgaaactcatagttgaaaatgaaggttcaata
ctccgccatctttttggtgccctggctgaagatgaaaactcggaaaatccaaactccctg
gatgtctttttccttgaagttattcccgtaccaccgtccagatttagaccgatttccaaa
gttggtgacaagagatttgaaaacccccagacagcgaatctcaaccacgtgttgactaat
agcattactttggccctcatacttgatattgtgaaacaagatgaagaaacgcaaactaca
gtggaggatgacactgctgtgccagtcgaaagagatgagagtgtcttggccagagtgctg
ggcaaaagcaaagtggagaaactacacaatgcatggatcaatctccagactagagtgaat
tgcctcattgacagtagtcttgataaactcaacacagataaacatcctggcattagacag
ctgttagaaaagaaagaaggattattccgtaaacacatgatgggaaagagagtgaactat
gctgctaggtctgtgatatcaccggatcctaacatagcaaccgatgaaattggaatcccg
gaagtcatagcaaccaagctgacatatccacaaccagtgacaccatggaatgtcaaggaa
ctcagacaggctgtcatcaatggacccaatgtacatcctggggcactgattgttgaaaat
gaagatggttccaaaacgttactacgggccggtaatacaacacagagagaagccatcgct
aagcaactgcttacaccaaacacaacactgggagttgcatcctcaaagaaggtccacaga
catgtgaagaatggtgatattttactgttaaacagacaacccaccctgcataaacccagt
atcatggcacacagggctcacattctccccggtgagaagacactccgacttcactatgcc
aactgcaagtcttacaacgctgatttcgacggtgatgaaatgaatgtccattttccgcag
aatgaagtcggcagagctgaagcttatgatatcatgaccaccaataaccagtacctggtt
cccaaagacagcacaccattaagtggtcttatacaggatcacatggtgtctggagttaga
atcaccatcagaggaagattcttcaacaggcaagattaccaacacttggtgtacagtgct
ctgactgataaacatggacccgtcaagttgttaccgccaacgatacgaaagccatgtatt
ctatggtctggaaaacaagtcttctcaacgctactcctcaacatcattccggatgacaaa
gaacccttgaattacacaggcaaggccaaaatctcaggaaagcactgggaaacccacaaa
gctcgtccatttgctgctggtggtacagcattgattgatgatgacatgtcagagagtgaa
attattgtcagacacggacagctactgtgtggagtgctggacaaggctcattatggacca
actccatatggactggtccattgttgttatgagttgtatggtggtaaagtgtcaggtcgt
ttactaacgtgtctaggcagattgttcaccagctttctccagactatatcaggttttaca
cttggagttgaagacatcttagtgacggcaaaggccgaccgcaaacgcagaaagctgttg
aacaaagcagagggttatggccctgctgttgcagccaaagcccttggtgttgaagatgcc
acagattctgcagtgcttcttgaaaagctagaagacgctcacagaaacctcagtggcaat
gacatgagagaaattgacctgtgcatgaaaagcacaacagatgaagtaacaaacgacgta
aataaagtctgcatacctagggggcttcagaaaacattccccgataacaatttacagttg
atggtgcaggcaggtgctaaaggctctcaggtaaactgcatgcagatttcatgcctactg
ggtcaaattgagttggaaggtcgacgaccccctctcatgatcagtggtcggtctttgcca
tcgttcctaccatatgatacttctccaagggctggtggctttgttgatggccgatttctc
actggcatcagacctcaagaatacttctttcattgtatggccggcagagagggtttagtg
gatacagccgtcaagaccagtagaagtggatatctgcagaggtgtctcattaaacatata
gaaggtctggtcgtgggatatgacttgacggttcgtgacagcgatggcagtatcatacag
tttcagtacggtgaggatgcactagatattttgaagacgccattcttgagagaaaagcag
ttcccattcatgatagccaatcacactgcactactggatgaaaaacacctgggtcagatc
tcccagaagctttccaccaatgatgttaaagagatacaacacaagataaagaaatgggaa
aagagacatggcaattgggaaggccagaaaatggtgaaaccattcgcatactttgcctac
aagaagtcagataaagtaaaggcagaaattgcagacactgaaacgaatgaaatggaattg
aagaagaaaactaaagaaaaattatcagaattgtggaggaccacatcagataaacaaaag
tattccaagcattgcgggagatgtcctgatccggtcttatctcagttacagccagatctt
cactttggtaatacatcagaaaaatttaccaagatggtggaatcatacataagtgccaat
cctcacagacttctatgtacacaaaaagatgtatcaaatacgagactaactgccgatcag
ttccgaaccatgatgaacatgaaatacctaacatcactatgccatccaggagaagcagtt
ggattattggccgcccagtccattggtgagcccagtactcagatgacgctgaacacgttt
cattttgccggaagaggtgaaatgaacgtaactctaggtattcccagactcagggagatt
ttaatggttggaagtcaaaatatcaaaactccaagcatgagtatcccagtactgccctca
cacaaagctcacaaaagagccaaaaagctgaagaaaaaactaaccagagtttacctttca
gaggtgttggagaaagttaatgtgacagagatgtatgaagtcaagggttcagggatgaaa
tacaggatatatacaatcaaacttactttccttcctcaagattgttacaaggaggacagt
gatcttacccctgaagatgtggtgaattatgtggagagaaaattcctcaaacgacttgtg
tctgcaattaaacaaaagattaaacaaatcatcaacacaagaattgttgattccaagaca
aggtcgtctgttctgaacgacgaccttgaagatgctgtggatgaacgtcctaaccgtggc
aacaagggtgaggatgaggactctgaagatgaaggtgatgaaagtgatgctgtcgctagg
aagagacggcaacagaggatggatgatatggaatatgaagagggaggtgatgaagaggaa
gaagatgtagaagaggagatggagcaatcagatgaagaagaggggcagaagacacagtct
aacgatgaggaagaaggggagaaagaagaaggaggagaggaagacaaggacaaaacatct
gcgccatcagttgaagtaaagaagtccaagaagaagaagaagacggagatagtccatgat
gacgatgataagagaatcagtgctgtctattctatcagcgatttgatctttgactacaag
tatgatacagaagatgacctttggtgctctgtgtcactcaggcttgatattgtggattcc
aagatggacatttgttcagtggtggagaatgaagcgaagaagtcaatagtgttacagaca
cctggaatcaccaggtgttttctgcaggacagtactgtaccagatgatgcaagccataaa
atactacagattgaaggtgtcaacatcatggagatgttctggtatgataaaatactgaat
cttcgaagactttacagcaatgacatccatgccatggccaatacgtatggtattgaagca
gcaagaagagttctcattaaagaaattcaagaagtcttcaaagcttacggcatccatgtg
gacagccgtcacctgaccctgatcggtgactacatgacttttgatggtgtgtacagaccg
tttaacagattcagtttacgatcaaactcgtcaccgttgcagaaaatgagttttgagcag
tcaatgacgtacctcaaagaagcaactgttgatggttcatgtgaccaactgaagtcacca
tcagctaggctagttgtaggacgtgtcgtcactggtggcacgggatcatttgatctgata
caaccactcagataa
DBGET
integrated database retrieval system
