Ptychodera flava: 139139102
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Entry
139139102 CDS
T10724
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pfll Ptychodera flava
Pathway
pfll03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
pfll03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
139139102
Chromosome and associated proteins [BR:
pfll03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
139139102
Chromatin remodeling factors
BAF complex
139139102
PBAF complex
139139102
GBAF(ncBAF) complex
139139102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139139102
NCBI-ProteinID:
XP_070563985
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Position
8:32048365..32070146
Genome browser
AA seq
1278 aa
AA seq
DB search
MTLPPKQSRIAPVGKPQGIDPIDILHEREHRIAARISYRIQELESLPGSLPDDLRTKATI
ELRALRLLNFQRQLRQDVVACMRRDTTLETALNSKAYKRCKRQSLREARITEKIEKQQKL
EQERKKRQKHVEYLNSIMQHAKDFKEFHRNVQQKNSKLSKAIMTYHANTEREQKKENERV
ERERMRRLMAEDEEGYRKLIDEKKDKRLAYLLTQTDQFIASLTDLVREHQASLKKKKQKK
PKKEKKPEIEGMVDESSQFSDITVNVIETETGRVLSGEEAPKASQLEAWLEMNPGYEVAP
RDDDSGEESEESGEEEEDEEEVAEHNDEERPVSHVNDPSMNKQIIAQAYVSEVDDDEYNK
VDDDEYNKVTKASSEINYYNVAHRVQESVSRQPDMMTNGTLKEYQIKGLEWLVSLYNNNL
NGILADEMGLGKTIQTIALVTHLMEKKRVNGPFLIIVPLSTLSNWAMEFDKWAPSVVRIA
YKGSPTVRRTLISQLRTGKFNVLLTTYEYVMKDKAVLAKIRWKYMIIDEGHRMKNHHCKL
TQVLNTHYMAPHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCCTFEQWFNAPFATTGEK
VELNGEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVLKCDMSALQRILYRFMQA
RGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPFMFQHIEESFCEHLGQTGGIVQGP
DLYRVAGKFELLDRILPKLKSCNHRVLLFCQMTSLMTILEDFFAYRGFRYLRLDGTTKAE
DRAKLLEMFNAPGSPYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRI
GQQNEVRVLRLLTVNSVEEKILAAARYKLNVDEKVIQAGMFDQKSTNTERRAFLMALLQQ
DQDEDEEENEVPDDETVNQMIARTEEEFDIYQRTDLDRRRLEARDPKRKPRLMEEEELPD
WILKNDYEVERLACEEEEEKLFGRGSRQKKDVDYSDALTEKQWLKAIEEGNLEEMEEQKR
YKKQRKRKRDDDIPKKEKKRRGRPPSEKLAPNPPKLTKQMKQLLETVLLYRDNNGRNLSG
VFMQLPPRRDLPDYYEMIRKPVDFKRIKERIKNHKYRCIDDLERDVMLLCKNAQTYNMEG
SQIYEDSIVLQSVFTNARDIIRQTGTLPSPYSDDQDDTEEDDDDDDQHDAGSDTESRSSV
RVRIKIGKGSSKGKEKERVKRKPGRPRKAVVSDDEDNSDTNDNNQSEQDNSDEDSDRTPD
SSRASSRVASPAPSHKKR
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgactctgcctccaaagcaaagccgcatagcgcccgtgggcaaacctcagggtatagat
cccattgacattctccatgagagagagcacagaatagctgccagaatcagttatcgcatc
caagaactggaatctttacccggctcccttcccgatgacctgagaaccaaggccaccatc
gaacttagggcactcagactgttaaatttccaaagacaattgcgtcaggacgttgttgcg
tgcatgagacgggacacaactctggagaccgcactgaactcaaaggcatacaaacgttgc
aagcgacagtccctgcgtgaggcaaggatcacagagaagattgagaaacaacagaagctg
gagcaggaaagaaagaaacgacagaaacatgtggaatatttgaatagcattatgcagcat
gccaaggacttcaaggagttccatcgcaatgtacaacagaagaacagcaaactgagcaag
gcaatcatgacctaccatgccaacacagagagggaacagaagaaagaaaatgaaagagtg
gaaagagaaagaatgcgtcgtcttatggcagaagatgaggagggctaccgtaaactcatt
gatgagaagaaagacaagcgtcttgcgtacttgctgacccagacagaccaattcattgcc
agtctcactgatcttgtcagagaacatcaagcaagtctgaagaagaagaaacagaagaag
cctaaaaaggagaagaaaccagagattgagggaatggtggatgaaagcagtcagttcagt
gacatcacagtcaatgtcatagagactgagactggcagggtgttgtccggagaggaggcg
cccaaagcaagtcagttggaagcatggctggagatgaaccctggctatgaagtagcacca
agggatgatgacagcggtgaagagagtgaagaatctggagaggaggaggaagatgaggaa
gaggtagcagagcataatgatgaggagagaccagtgtcacatgtgaatgatccatcaatg
aataagcaaatcattgctcaagcctatgtatctgaggttgatgatgatgagtacaacaaa
gttgatgatgatgaatacaacaaagtaaccaaggcatccagcgaaatcaactactacaat
gtagcccatcgagttcaggaatccgtcagcagacagcctgatatgatgaccaacggaact
ctgaaagagtaccagatcaaggggcttgaatggttggtatccctgtataacaacaatttg
aatggcattttggctgatgagatgggacttggtaaaaccatccagacaatagccctagtt
acacatctcatggagaagaaaagagtcaatggacctttccttatcatcgtacctctatct
actttatcaaactgggccatggagtttgacaagtgggcaccatctgttgtgaggattgcc
tacaaaggctctccaacagtacgccgaactctcatctctcaactgaggaccggaaagttc
aatgttcttctgacaacatatgaatatgtcatgaaagacaaggcagttctagcaaagatt
cgttggaagtacatgataatagatgaaggccatcggatgaagaaccaccactgcaagtta
acacaggtgttgaacactcactacatggctccacacagggtacttctcactggtacacca
ttacagaataagctgcctgagttgtgggcattgctgaatttcttactgccaagcatattc
aagtcctgctgtacatttgaacagtggtttaatgcgccatttgcaacaacaggagaaaag
gtggaactgaatggagaagaaaccattttgatcattcggcgtctgcacaaagtgttgaga
ccattcttgctgagacgtctcaagaaggaagtggaatctcaactgccagaaaaggttgaa
tatgtgttgaagtgtgacatgtcagcattacagcgtatcttgtacagattcatgcaagcc
agaggagtactgctaactgatggatcagaaaaggacaaaaagggcaaaggtggcacgaag
acgttaatgaacactatcatgcagctacggaagatatgtaatcatccattcatgtttcaa
catattgaggaatcattctgtgagcatctcgggcagactggtggcatagtgcagggccct
gatctctaccgtgtggccggcaaatttgaactcttagatcgtatcttgcccaagttgaag
tcgtgcaatcacagggtgttgctgttctgtcagatgacatcactcatgaccattttggaa
gacttctttgcttacagaggtttccgatatcttcgacttgatggcacaaccaaagcagaa
gacagagccaagttgctggagatgttcaatgctccaggttcaccgtactttatcttctta
ctcagtacacgtgctggaggcttgggtctgaatctccaagctgccgacactgttgtcata
ttcgacagtgactggaaccctcatcaggatttacaagctcaggacagagcacacagaata
gggcagcagaatgaagtgcgggtgctgcgtctgctcaccgtgaacagtgtagaagagaag
atcctggcagctgcacggtacaaactcaatgtggacgagaaggtcatccaggctggaatg
tttgatcagaaatccaccaacactgaacgtcgtgcattcttgatggcactcctccagcag
gaccaagatgaagatgaggaagagaatgaagtacctgatgatgagacagtgaatcagatg
attgccagaacagaagaggaatttgacatttaccagcgtactgatttggaccgccgacga
cttgaagctcgagatcctaagcgcaaaccaagactgatggaggaggaggagttgccggac
tggatccttaagaatgattatgaggttgagaggttggcatgcgaggaggaagaggagaaa
ttatttggtcgcggatcaaggcagaagaaagatgttgattacagtgatgctctcacagag
aaacagtggttgaaggcaatagaagaaggcaacctggaagagatggaggagcagaaacga
tacaagaagcagaggaagaggaaacgggatgacgacattcccaagaaagaaaagaagagg
agaggacgtcctccaagtgaaaaacttgcaccaaatcctccaaagttaacaaaacagatg
aaacagttgttagagactgtccttctctacagagacaacaatggacggaacctgagtgga
gtgtttatgcagcttccaccgagaagagatttgcctgactactatgagatgattagaaaa
ccagtagacttcaaacgcatcaaagaacgcatcaagaatcacaagtacaggtgtattgat
gatctggaaagagatgttatgcttctctgtaagaatgcacagacatacaacatggaaggc
tctcagatctatgaagactccattgtgttacagtcagtgttcaccaacgcccgtgacatc
atcagacagacgggtacattaccatcaccgtattccgatgaccaagatgacactgaagag
gatgatgatgatgacgaccaacacgatgctggctctgatactgaatcccgctcatctgtt
cgagtgagaataaagattggcaagggaagcagcaaggggaaagaaaaagagagggtaaaa
cggaagccgggacgtccaaggaaggcagtggtcagtgatgatgaagataacagtgatacc
aatgataataaccaaagtgaacaggataactctgatgaagacagtgacagaaccccagac
tcctccagggcatcatctcgagtggcatcaccagccccatctcacaaaaaacgatga
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