Ptychodera flava: 139139349
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Entry
139139349 CDS
T10724
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
pfll Ptychodera flava
Pathway
pfll03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
139139349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfll03400
]
139139349
DNA repair and recombination proteins [BR:
pfll03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
139139349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
AcMNPV_Ac75
Motif
Other DBs
NCBI-GeneID:
139139349
NCBI-ProteinID:
XP_070564329
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All DBs
Position
8:complement(40699773..40763965)
Genome browser
AA seq
941 aa
AA seq
DB search
MLSLTSKQLSSNMAVQPNQQLSLDNVQEQGFLSFYRKMPEKPDTTFRFFDRTDYYTCHGN
DALFAAKEVFKTTGVIKYLGKGPDTVASVVLSKMNFEALLRDLLLVKQYRVEVYKKEGAS
KTNEWVVEYKASPGNLTQFEDVLFGSNDMSTSASVVAVKLASDNAQRVIGVAYVDATLKE
LGVCEIPDNEQCSNLEALLVQIGPKECVLPSGDSSPDMKKLKQIVERSGILITETKRGDF
STKDSIQDLNRLLKSKKDDQGNSCALPELEKTHAMASLSALVKYLELLSDERNFSQFTLT
TIDLNQYMRLDAAAVRALNLFPNSLDGGNKSMCLHGLLNRCRTAQGQRLLTQWIKQPLLD
QNKIEERLNLVESFVDDTELRQTLQDEQLKRIPDFQRIAKKFLRNKATLQDCYVVYQAID
SFPLTLEAIEKHDSKYKQLLMEVFSNPAKEILMDFAKFQEMIESTLDMEQIEHHEFMIKA
DFDPDLQVLKDKIKSLESSIQKELNKSARDLAVDVNKVLKLESNSQLGYFFRVTRKEEKI
IRNNKKYITIDTNKNGVRFTNSSLKSLNDEYMAAKDSYTETQKAVVSEIINIAAGYVEPL
QLLNQIVAHLDVLVSFASVSVSAPIPYVRPEILSKGEGYIELSQSRHPCIEVQDDVAFIP
NDVNFEKDKEMFHIITGPNMGGKSTYIRQIGVVVLMAQLGCFVPCQKARVSIVDSILARV
GAGDSQLKGVSTFMSEMLETASILRSASENSLVIIDELGRGTSTYDGFGLAWAISEYIAT
KIKCFCLFATHFHELTSLADVVPTVDNLHVTALTTGETLTLLYKVKQGVCDQSFGIHVAE
LAHFPQKVIEFAKEKAAELEDYQSISLSQSGLEGHDEPVAKKRRLAKEEGEEIIKDFICK
VKALPLATMTTEEALEEIEKLKASVRAKNNPYVADILTRGY
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgttatccctaacaagtaaacagttatcttcaaacatggcggtacaaccaaaccagcag
ttgtcactagacaatgtacaggaacaaggctttctttccttctatcggaagatgccagag
aaaccagacacaacattcagattctttgacagaacggactattatacctgtcatggtaat
gatgcattgtttgccgcaaaagaagtctttaaaactacaggtgttattaaatatctagga
aaaggtcctgacacagtagcatctgttgtcctcagtaagatgaattttgaagctttgttg
agagatttgttgcttgtaaaacagtatagagttgaagtttacaagaaggaaggtgcaagc
aaaacaaatgaatgggttgtagaatataaggcttcaccgggtaacttgacacagtttgaa
gatgttttatttggaagtaatgatatgtcaacatcagccagtgttgtggcagtaaagtta
gcaagtgacaatgctcagagagtgataggtgtagcttatgtagatgccacgctgaaggaa
ctaggagtctgtgaaattccagataatgaacaatgttctaatttagaggcattgcttgtt
cagattggacccaaagagtgtgttttaccgtctggagacagcagtccagatatgaagaaa
ctcaaacagattgttgaaagaagtggcatattgataacagagactaagagaggtgatttt
tccaccaaagacagcattcaagatctaaataggttattgaaatctaagaaagatgatcag
ggcaattcctgtgcattacctgaattggagaagacacatgcaatggcttctttgtcagca
ttggtgaagtacctagagctgcttagtgatgagagaaactttagtcagtttacattgaca
accattgaccttaatcagtatatgagacttgatgcggctgcagtcagagctcttaatctt
ttcccaaacagtctggatggtggaaacaagtcaatgtgtttacatggattattgaataga
tgccgaacagctcaaggacagagactgctgacacaatggatcaaacaacctctgttggat
caaaacaaaatagaagagaggttgaatttagttgaatcatttgttgatgacacagagctg
agacagaccctacaagatgaacaactgaagagaattccagatttccaaagaattgccaag
aagtttttaagaaacaaggccacacttcaagactgttatgttgtctaccaagccattgac
agctttccactaacattggaagccatagaaaaacatgacagcaaatacaaacaactactt
atggaagtattttctaatcctgccaaggaaattttgatggactttgcaaagtttcaagag
atgatagaatctacacttgacatggaacaaatagaacaccatgaattcatgattaaagca
gattttgatcctgacttgcaagttttgaaagacaagataaagagcttagaaagcagcatt
cagaaggaactgaacaaatcggcaagagatcttgctgttgatgttaacaaagtattgaaa
ttggaatccaactcacaacttggatatttcttcagagtgacaaggaaggaggaaaaaatt
attcggaacaacaagaagtacatcaccatagataccaacaagaatggtgttagattcacc
aactcctccttgaagtcactgaatgatgaatacatggctgccaaagattcctacacagaa
acacagaaagcagtggtttctgaaattatcaacatagcagctgggtatgttgaaccattg
cagctactcaatcaaattgtggcccatctcgatgtccttgtcagttttgcaagtgtatct
gtgagtgcaccaattccatatgtacgtcctgagatactcagtaaaggtgaaggttatatt
gaactgtcacaatcaagacatccttgcattgaagtacaagatgatgttgctttcatacca
aatgatgtcaactttgaaaaagacaaagagatgtttcacatcattactggacctaacatg
ggaggaaagtcaacatacatcagacagattggagttgttgtgttaatggcacaacttgga
tgttttgtaccatgtcagaaggctagagttagtatagtagactcaatacttgcaagagtt
ggtgctggagacagtcaacttaaaggagtatcaacatttatgtcagaaatgttagaaact
gcttctatattaagatctgccagtgagaactcattggttataattgatgagcttggacga
ggcacgagtacgtatgatggttttggactcgcatgggcaatatctgaatacattgcaacc
aagatcaagtgtttctgtctttttgctacacattttcatgaactgacatcgctggctgat
gttgtcccaactgttgacaatcttcatgtcaccgcattgacaacaggggaaaccctaact
ctgctgtacaaagtgaaacaaggagtgtgtgaccaaagttttggaatccatgtagcagag
cttgcacattttccacaaaaggtaattgagtttgcaaaagagaaagctgcagaacttgaa
gattatcaaagcatatcattatcacagtctggtttagaaggacatgatgagccagtagcc
aagaagagacgacttgcaaaggaggaaggggaagaaatcatcaaagatttcatatgtaag
gtgaaagcactaccattggctaccatgacaactgaagaggctcttgaagaaattgaaaaa
ctaaaagctagcgtcagagcaaagaataatccttatgtggcagatattttaacaaggggt
tactaa
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