Ptychodera flava: 139140077
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Entry
139140077 CDS
T10724
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pfll Ptychodera flava
Pathway
pfll03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
139140077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfll03021
]
139140077
Enzymes [BR:
pfll01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
139140077
Transcription machinery [BR:
pfll03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
139140077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
139140077
NCBI-ProteinID:
XP_070565185
LinkDB
All DBs
Position
9:complement(14181000..14217028)
Genome browser
AA seq
1134 aa
AA seq
DB search
MAAPSFKHLTDPKFGKPPDKQHQALQNLTKPHIESFNYMLKEGLKLAIQDIPPVEFSLQS
GQRVSLSFTDVSVGVPAVAQGNLHASTLKVYPSECRERGSTYKAXLRAYVCWKLDGQAAN
TLDIQLGEVPIMVKSDHCNLSKLSPAELIKKHEEAEEMGGYFIVNGIERVIRMLVLPRRN
FAMAIFRPAWKSRGKLYTEYGVSMRCVKNDQSAMNIVVHYLSNGTAMLCFTFRKEQFFIP
VVVILKALIDTTDQYVYQELIKGRETNTYYKGCITAMLRQAQNQGLTSRASILRFLGETF
RVKLGLAEWYSDVEAGQYLMKQCICTHLSDDSDKFNTIVSMVRKLFSFARGECAADNTDS
PMNQEVLLGGHLYLMYLKEKLGNWLLSLRYIIERLSSNASQTFELNATVINSASRKTISI
SHSMEYLIATGNLQSKTGLGLMQATGLTVVADKLNFWRYVSHFRCIHRGAFFAEMRTTSV
RKLLPEAWGFLCPVHTPDGAPCGLLNHMTAACQVVNVQPLTAHLNRLLCSLGMTSLESPP
PTSASLCYEVVLDGCVLGRVSKETASEFVDKLRLLKVKGEQRVPSAMEIILVPMTGKASQ
YPGIYLFTTPARLMRPVLNLVTNTTEMIGTFEQVYMNIAVNPHEIHEGLTTHMELNENSL
LSAVASLTPFSDFNQSPRNMYQCQMGKQTMGTPVYTYQHRTDNKLYRLQTPQSPIVRTES
YDHYSFDHYPVGTNAVVAVISYTGYDMEDAMILNKASYERGFAHGTIYKTEEVDLKKMTG
DKSKRVSHVFGCLPDDRRTQGRLDIDGFPPVGAVLQPDDPLCGYINIETGESRTITFRHH
EVAVVDNIKLCGDDLGNQECQKAYIILRIQRNPTIGDKFSSRHGQKGVCSQLWPAENMPF
TESGMTPDIIFNPHGFPSRMTIGMMIESMAGKSGSLHGLRHDGTPFTFSEDRPAIDYFGK
LLKEAGYNYYGNERMYSGVDGRELEADIFVGVVYYQRLRHMVEDKFQVRTTGPIDILTHQ
PVKGRKRAGGIRFGEMERDALLSHGTSFLLQDRLVNCSDNSVTQLCTKCGSLQGIIQHKK
SVILEGGSSNSSSQWYCRICQSSDHIQIISVPYVFRYLLAELAAMNIKTTLDVN
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcccagctttaaacacttgaccgatccaaaatttggaaagccaccggataaa
caacaccaggctcttcaaaacctgaccaaaccgcacatagaatccttcaattacatgttg
aaagaaggactgaaactagccattcaagacataccacctgttgaattttccctgcagtct
ggacaaagagtatctctgtcatttacggatgtatcagtgggtgttccagctgttgcccag
ggcaacctccatgcctcaactttaaaagtttatccttcagagtgcagagagagaggtagt
acatacaaagctnagctgagagcctatgtgtgctggaaactagacggccaggcagccaac
actctggacatccagcttggtgaagtgcccatcatggtcaagagtgaccattgtaatctt
agtaagctgtcaccggctgagctcattaagaaacatgaagaagctgaagagatgggaggt
tactttattgtgaatggtattgagagagttatcagaatgcttgtactgcccaggagaaat
tttgcgatggcaatattccgaccagcgtggaaatccagaggaaaactgtacacagaatat
ggtgtatccatgagatgtgtcaagaatgaccaaagtgctatgaacattgtggtccattac
cttagcaacggcacagccatgttgtgtttcacattccgcaaagaacagtttttcattcca
gttgtagtcatcttaaaggctctgattgataccacagaccagtatgtctatcaagaattg
ataaagggaagagaaacaaacacatactacaagggatgcatcacagccatgttacgtcag
gcacagaaccagggtctcacttcaagggccagtatcctacgttttcttggtgagacattc
cgtgtcaagttagggttggccgagtggtacagtgatgtggaggcaggacagtatctcatg
aaacagtgcatctgcacacatctcagtgatgactctgacaagttcaacaccatagtttcc
atggtgcgcaagttattttcatttgccagaggagaatgtgcagcagataacactgatagt
cccatgaaccaggaagttcttcttggaggtcacctgtacctcatgtacttaaaggaaaaa
ttaggaaactggttgttgtcgttgaggtacataattgagaggctttccagtaatgcttca
caaacatttgaacttaatgccactgtcataaactcagcaagcaggaagaccattagcata
tcacattctatggagtatctgatagcaaccggtaaccttcaatcaaagactggtcttggg
ctcatgcaggcaaccggtctgacggtagttgctgataaactcaatttctggcgctacgtg
tcccacttccggtgcattcacaggggtgccttctttgcagaaatgaggacgacatctgtg
cggaaactgcttcccgaggcctggggttttctttgtccagtacacactcctgatggtgca
ccgtgtgggcttctcaaccacatgactgctgcttgtcaggtggtgaatgttcaaccgctg
acagcacatttgaataggctgctttgtagcttaggtatgacctcattagaaagtccacca
cctaccagtgcctctctctgttacgaggttgtcttggatgggtgtgtccttggccgggtt
tccaaggagactgcgtcagagtttgtggataaattgaggctgttgaaggtgaaaggtgaa
caaagggtaccgtcagcaatggagattatcctagtacccatgactggtaaagccagtcaa
tatccagggatttatttgttcacaacaccggcaaggctgatgagacctgtgctcaaccta
gtgacaaacacaacagagatgattggtacatttgaacaggtgtacatgaatattgcagtc
aatccccatgagattcatgaagggttgacaacacacatggagctgaatgaaaacagtcta
ttaagtgctgttgccagtcttactccgttctcagatttcaatcagagtccacgtaacatg
taccagtgtcagatgggaaagcagacaatgggtaccccagtatatacttaccagcacaga
acggacaataaactttacagactacaaacgccacagagtcccatagtgagaacagaatca
tatgatcactatagctttgatcattacccagtggggaccaatgctgtggttgctgttatc
tcatacacaggttacgatatggaagatgccatgattctcaacaaagcatcctacgagaga
ggttttgcacacggcactatttacaagacggaggaagtggatctgaagaaaatgactggt
gataaaagcaagagggtttcacatgtctttggttgcctgcctgatgatagaagaactcaa
ggtcgccttgacattgatggtttccctcccgttggagcagttctgcagccggatgatccg
ctgtgtggatacataaacattgagaccggagaatctcgtacgatcactttccgacaccac
gaagttgcagttgtggataatatcaaactatgcggtgatgatctcggaaaccaggaatgt
cagaaggcctacatcatcctcagaatccagagaaatccaaccattggtgacaagttctca
agtcgacatggccagaaaggtgtatgcagtcagctgtggccagctgaaaacatgcctttc
acagagagtgggatgacaccggatattatcttcaacccccacggcttcccctcacgaatg
acaataggaatgatgattgaaagcatggctggaaaatctggatctttacacggtctccgc
catgatggtactccatttacattctctgaagacagacctgccattgactactttggtaaa
cttctcaaggaagctggttacaattactacggcaatgaacgtatgtacagtggtgttgat
ggtagggagttagaggcggacatctttgttggtgttgtctactatcagagactcagacat
atggtggaagacaagtttcaggtgcgtacaactggtcccattgatattctgactcatcag
ccagtcaaaggaaggaaacgagctggcgggatacgattcggtgaaatggaacgtgatgcc
cttctttcacacggcacatcatttctgttgcaagacagacttgtgaactgttccgacaac
tcggtgacccaactgtgtacaaagtgtggcagtctacagggtataatacaacacaagaaa
tctgtaatacttgaaggaggttcttcaaattcgtcatctcaatggtactgcaggatatgc
caatcatctgatcacatccagatcatctcagtgccttacgtgttcagatacttacttgct
gaattggctgctatgaacataaagacaacattggatgtaaactga
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