Ptychodera flava: 139140416
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Entry
139140416 CDS
T10724
Name
(RefSeq) E3 ubiquitin-protein ligase rfwd3.L-like
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
pfll Ptychodera flava
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pfll04121
]
139140416
Enzymes [BR:
pfll01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139140416
Ubiquitin system [BR:
pfll04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139140416
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4_2
zf-C3HC4
Beta-prop_WDR5
Beta-prop_THOC3
zf-RING_UBOX
WDR55
zf-C3HC4_3
zf-RING_5
zf-rbx1
Beta-prop_EML_2
zf-UDP
EIF3I
Beta-prop_WDR3_1st
zf-RING_Vps41
zf-RING_11
Beta-prop_RIG_2nd
WD40_Prp19
zf-C3HC4_4
zf-ANAPC11
zf-Nse
Beta-prop_WDR3_2nd
LSM12_LSM
Beta-prop_EIPR1
Beta-prop_TEP1_C
FYVE
WD40_2
Motif
Other DBs
NCBI-GeneID:
139140416
NCBI-ProteinID:
XP_070565742
LinkDB
All DBs
Position
9:complement(23622079..23636722)
Genome browser
AA seq
733 aa
AA seq
DB search
MSSNEEQMEVDPGDDEDDEGTMYDSDETLIDGEETDYDSEEDQPGPVIHQRGQSERSVQV
RNETLQQANEDSDATEVHTDYDDDESEQPGQAQPIASTSGTHRNSDQSERPIQRVSVQAG
SIAQSNSQSQDEEGSQSILPVDTLPRLDQSGVRTEPNSANLAQAAVRVDSQRSDDVPGQS
SREPRNPAVNLVGANPVEIDLTQDEPRQAPRLPNVHIQANLSLINTSLQSPNNFTTPKKP
IPESPEKDDEAETCSICFDSWTNSGSHRLSSLKCGHLFGQSCIEKWLKGHGGKCPQCNAK
AKKTDIRVLYAKAVRALDTTERDRALKELEKEKEIRRKAEVEAAQLKMQYQMALEECNKL
KSQLKAHDRLISSQNRPGPSSSLEQSSSTYNGQYKLERVITTSPNGGCRIMAFDPSHRVL
VVSMPSPNQLFPGYGVKKISMLDMKSSQYVTIHTKMLRDCCFNNRQDGLLLSTSIDKTVK
ITSLLSNTVVQTYSCNVPVWSCAWNLDDTNYIYAGLMNGSIVMYDTRNTNTEVTQFNREG
SRCPIVSLHYVQSNVDSSFRCSGLLSGTLEGAQFWEKKTAAEYKPHILPLEGSCTNLSFE
SKTRHCLASFRPGRQHNTARHVMCELQNVQLDVGDSNSLTCTCNAVQTFYGGSSMKLLTR
SRLFQNPADCNKVLACAGDESSLSAHVWDGSTGSLQQKLMANGPVLDVCPFRLNNQHMLA
IMTEKIVKVHRWS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccaatgaagaacaaatggaagttgaccctggtgatgatgaagatgatgaagga
actatgtatgatagtgatgaaacactaattgatggtgaagaaacagattatgacagtgaa
gaggaccagccaggaccagtaatacaccagagaggtcagtcagaaaggtctgtacaagtg
agaaatgaaactttacagcaggcgaatgaagacagtgacgcaacagaggtacatacggat
tatgatgatgatgaaagtgaacaaccaggtcaggctcaaccaatagcctcaaccagtggc
actcatcgaaacagtgaccaatcagaaaggccgatacaaagggtctctgtacaagcagga
agcattgcccaaagcaacagccaatcccaggacgaagaaggaagtcaatcaatactgcct
gttgatacactgccacgacttgaccaatcaggtgtcagaaccgaaccaaacagtgcaaac
ttagcacaagcagcagtcagggtagactctcagagatctgatgatgtgccaggtcaaagt
tcaagagaaccgaggaacccagctgtcaatctagttggtgcaaacccagtagaaatagat
ttaactcaggatgagccaaggcaagcgccaaggctaccaaatgtgcacattcaagccaat
ctcagtctgataaacacttcacttcagtctcccaataactttacaacaccaaagaaacca
atcccagaatctccagagaaggatgatgaagctgagacctgttcaatatgttttgattcc
tggactaattcaggatctcatagactgtcatccctgaaatgtggacatctctttggtcaa
agttgcattgagaagtggttgaaaggtcacggcggaaaatgcccacaatgcaatgcaaaa
gccaagaaaacagacatcagggttctgtatgccaaggctgtcagggccctggacaccacg
gagagggacagggccttgaaagaattggaaaaagaaaaagaaatcagacgcaaagcagaa
gtggaagctgctcaattgaaaatgcaatatcagatggcattagaggaatgcaataaactg
aaatcacagctcaaggctcatgataggctgatttcttctcaaaatagaccagggccttca
agttcccttgaacagtcttccagtacgtacaatggacagtacaaattagagagagtcatt
acaacttccccaaatggtggttgtcgtatcatggcatttgacccatcacatagagtactt
gttgtatccatgccttctccaaatcagctcttcccaggttatggtgtcaaaaagattagc
atgttagacatgaagagcagtcagtacgttaccattcataccaagatgttgagagattgt
tgtttcaacaatcgacaagacggccttctacttagcacttccatagacaaaaccgtgaaa
atcaccagtctccttagcaacacagtggtacaaacttactcatgtaatgtaccggtttgg
agctgtgcgtggaatctggacgacaccaattacatttacgctggtttgatgaacggtagc
attgtcatgtatgacactcgtaacaccaacactgaagttacccagttcaacagagaaggc
tcaaggtgtcccattgtgtctcttcattacgttcaaagtaatgttgattcgtctttcaga
tgcagtggtctgctgtcaggaaccttggaaggtgctcagttctgggagaagaagactgca
gctgaatacaaacctcacatactgcctttagaaggcagctgtacaaatttatcatttgaa
tcaaagacaaggcattgtctggcctcgttcagaccaggtagacaacataacacagcaaga
catgtgatgtgtgagttacaaaatgtacaacttgatgtcggcgatagcaacagcttgacc
tgtacatgtaatgctgtacagacattctatggtggttccagtatgaaactcctcaccaga
tcaaggctgttccaaaatcctgctgattgtaataaagtactggcctgtgctggagatgaa
tctagcttatcggcccatgtgtgggacggcagtactggctctttacaacagaaacttatg
gccaatggacctgtgctggatgtgtgcccattcaggctgaataaccaacacatgctggca
ataatgacagaaaaaattgtcaaagtccacagatggtcatga
DBGET
integrated database retrieval system
