Ptychodera flava: 139140426
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Entry
139140426 CDS
T10724
Name
(RefSeq) general transcription and DNA repair factor IIH helicase/translocase subunit XPB-like
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pfll Ptychodera flava
Pathway
pfll03022
Basal transcription factors
pfll03420
Nucleotide excision repair
Brite
Enzymes [BR:
pfll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
139140426
Transcription machinery [BR:
pfll03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
139140426
DNA repair and recombination proteins [BR:
pfll03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
139140426
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139140426
NCBI-ProteinID:
XP_070565802
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Position
9:23776425..23796501
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AA seq
794 aa
AA seq
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MPKRNRGNEKDSKSKKSKISEVEWEDEDSNLGPEGTDLAAAASREVADQAAEDEFGAKDY
RDQMKLKPDHQSRPLWLAPNGSIFLESHSPVYRHAHDFLIAIAEPVCRPKHIHEYKLTAY
SLYAAVSVGLQTADIIEYLRRLSKTSIPDGIIEFIQLCTLSYGKLKLVLKHNRYFVESRH
AEVIQKLLKDPVIQECRLRRDTDDPDQTEDNLIVSKVSSKSALQLNKPSTSNSNSNDGTS
KGAENSQENGAGDQAAIPKDIFDFYGKIDDDDEEEVEDLQTVSFEVNQEHIETIQKRCIE
LEYPLLAEYDFRNDNVNPDISIDLKPMAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGK
TLVGVTAACTVRKRCMVLCTSGVSVEQWKSQFKLWSTVDDSMICRFTSDAKDKPMGCSVV
ISTYSMMGHSTKRSWEAEKMMEWIHAQEWGLMLLDEVHTIPAKQFRRVLTSVQAHCKLGL
TATLVREDDKIADLNFLIGPKLYEANWMELQDSGFIAKVQCAEVWCPMTPEFYREYLAIK
TKKRNLLYVMNPNKFRACQFLVKYHEQRNDKVIVFSDNVFALKHYAVAMGKPYIYGPTTQ
GERMQILQNFKHNPVVNTIFISKVGDTSFDLPEANVLIQVSSHGGSRRQEAQRLGRILRA
KKGSAAEEYNAYFYTLVSQDTHEMYFSMKRQRFLVNQGYAFKVITKLAGIEEENLKYSTK
QEQQRLLQQVLAASDADADEERVPGELGAKGNQVVRRVGSMSSMSGADDHVYMEYQSKSK
TKANMHPLFKKFRT
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagagaaacaggggcaatgaaaaagattcaaaatcaaagaaaagtaaaatatct
gaagttgaatgggaggatgaagattcaaacttaggaccagaaggtactgatctggcagct
gctgcttcaagagaagtcgctgaccaggcagctgaggatgaatttggagctaaggattac
agagatcagatgaaattaaaacctgatcatcaatcgagacctctttggctggcacccaat
ggcagtatatttttggagtctcactctcctgtgtacaggcatgcccatgactttctcatt
gccattgcagaacctgtgtgcagacccaagcatatacatgagtacaaactgacagcatat
tccctttatgcagcagtgtcagttggtctgcagactgcagacattatagagtacctacgc
agactcagtaagacatctataccggatggtatcattgaattcattcagctatgcactctc
agctatggaaaattgaagttggtactgaaacacaacagatactttgtagagagcagacat
gcggaagtgatccagaaactattgaaagacccagtaattcaagaatgcaggttacgacga
gacactgatgatcctgatcagactgaagataatttgattgtttcaaaagtgtcaagcaaa
tcagctctacagctgaacaagccaagtacttcaaacagcaattctaatgatggcacaagc
aaaggagctgaaaactcacaggagaacggtgcaggtgaccaggctgccatcccaaaggat
atctttgatttctacggcaagatagacgacgatgatgaagaagaagtggaagatttacag
actgtttcttttgaagtcaatcaagaacacatagaaacaatacagaaaagatgcatagaa
ttggagtatccattgttggcagagtatgatttcagaaatgacaatgttaacccagatatc
agtattgacttgaaacccatggcagtactcagaccataccaggagaaaagtctgcgtaaa
atgtttggtaacggcagagcaaggtcaggggtcattgtcctaccatgtggtgctggcaag
acactggtaggggtgactgcagcatgtactgtgagaaaacgttgtatggttctgtgtaca
tctggtgtatcagttgaacagtggaaatcacagttcaaactctggtccacggttgatgat
agtatgatatgcagatttacatcagatgccaaagataaaccaatgggatgcagtgttgtt
atcagcacatattccatgatgggtcactccaccaagagatcttgggaagctgagaaaatg
atggaatggatacatgcccaggaatgggggctcatgcttcttgacgaggtacacaccata
ccagccaagcagttcagaagagtactaacatcagtacaggcacattgcaaactgggtctg
acagcaaccctggtcagagaagatgacaagattgctgatctgaactttttgatcggcccc
aaactgtatgaagccaactggatggaactccaagactcaggattcattgccaaagtacag
tgtgcagaagtctggtgccctatgacccctgagttctacagagagtatcttgcaatcaag
acaaaaaagagaaatttactctatgtaatgaacccaaacaagttcagagcctgccagttt
ttggtgaagtaccatgagcagagaaacgacaaggtcattgtgttctcagataacgtgttt
gcattgaaacactatgctgtagccatgggcaaaccttacatctatggacccaccacacaa
ggggaaagaatgcaaattttacagaattttaagcacaatccagttgttaatacaatattt
atatccaaggtaggagacacatcgtttgatttaccagaagccaatgtactgatacaagtt
tcatctcatgggggttcccgacgacaagaagcacagcgattaggaagaattctcagagct
aagaaaggctctgctgctgaggagtataatgcatatttctataccttggtgtcacaagac
acacatgagatgtacttctccatgaagagacaaagatttcttgtcaaccagggatacgct
ttcaaagtcatcacaaagctggctggaatagaggaggaaaatctcaagtactcaaccaaa
caggagcaacagaggttacttcagcaagtgttagcagccagtgatgcagacgcagatgag
gaaagagtgcctggagaattgggagccaaaggcaaccaggttgtgcgtcgtgttggcagc
atgagttcaatgtcaggtgcagatgaccatgtgtacatggagtaccagtcaaagtcaaag
acaaaggctaacatgcatcccctcttcaaaaagttccgcacttga
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