Ptychodera flava: 139140446
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Entry
139140446 CDS
T10724
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16-like
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
pfll
Ptychodera flava
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfll03021
]
139140446
Transcription machinery [BR:
pfll03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
139140446
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
ANAPC4_WD40
Beta-prop_IFT140_1st
WD40
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
139140446
NCBI-ProteinID:
XP_070565835
LinkDB
All DBs
Position
9:24231027..24249483
Genome browser
AA seq
845 aa
AA seq
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MELVFASEWPKGDSNAWTRKWTIDAACSWSCRNTIAFSGASGCKLSNANDGESQGGKVHI
VDPDRPWQVHSFNTGHANVIRCIRWDISGTRLVTADGSGKCKLWTMRNHILNDWQCGGES
TVEGETIVALSWLHIGLKVSYNVERTDSPNVMEKFSRQKFHPSVLQYGGKAIEGWIAITM
SGLVSVTLIKANGDLVTATECLSESRTHIALADIAFKSSGHIVIGTSDGSVRCPISFYKL
IVKYNKDYCSIHSEALPSLFMQCCTDPNQKDKYNYVSHIQFMKKEAGDQIIACAGGPLGA
CIECWGLRREPVSVHKSFQASSPPRTRDQQPSTLKWIYNASYTDTSNVAALALPKLPLNL
SNKSIYNGPGMVFAVAFHDGSIKLLHRVSLKPFAVFKYEGVKQESGPQLKRQKNSNNGKQ
LSCIEMSATCCSLIGVDKSGTLCLMKIAPTLGQALDPGAARAHTIAQVVNLLEYCMVTCY
DWWDLLLTITPGMVETVIDRLSEAFNRQPKSLQELLFTRLTAVKATLYRLNISGTGKSAD
CHAKLLLHAIAVTFKSLLRPTSLSSQEKGLAEKLAAVCARSVETDLDKIMMNLDTKEFVI
EPATVQSLQQLIQWVADFALFLLSNVPLQQMYSNRPGLSMLRDWSVLCTLRELLVIIRIW
GLIKSTCQPVFTSTSDNVDGLSTLFKLLTQVWLCCKDDSYSEFDDALIDECILLPSQLLV
PNLESLPVVEGITGKITGKLPMSFHFESTPLHIPHVTSFNPGATPGSELTTRLMTDKHCH
KHDIVRRIHLGVAPHDELKQCTRCSCVSLVKSTAQTPALKAWDQRWVKACVCGGQWRKLD
LPQPM
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggaattagtcttcgcaagcgaatggccgaagggtgattcaaacgcatggactagaaag
tggaccattgacgccgcttgctcatggtcttgtcgcaacacaatagcattttctggggca
agtggatgcaagttaagtaacgcaaatgacggggaatctcaaggtggtaaagtacatatt
gttgacccggacagaccctggcaagttcacagtttcaacactggtcacgccaacgttatc
cgatgcatcagatgggatatttcaggaaccaggctggtcacagctgacggcagtggtaaa
tgcaaactgtggaccatgagaaaccatatactgaatgactggcagtgtggaggagagagc
acagttgaaggagaaacaatcgtagcgctttcatggcttcatatcggcctcaaggtcagc
tataatgtagagaggacagactccccaaatgtcatggagaaattctctcggcagaaattc
cacccttcagtattacagtatggtgggaaggccattgaaggatggattgccataaccatg
tctggtctggtcagcgtgacattgataaaagccaatggtgatttggtcacagccacagag
tgtctcagtgaaagcagaacacacatagctctagcagatattgcatttaaaagctctgga
cacatagtcatcggtacatcagatggaagtgtgagatgtccgataagtttttacaaactg
attgtaaaatataataaagattactgctctattcattctgaagcacttcccagtctcttc
atgcagtgttgtacagatcctaatcagaaagacaaatataattatgtgagccatatacaa
ttcatgaaaaaggaagctggtgaccaaatcattgcatgtgctggaggccctctaggagca
tgcatagaatgttggggtttgcgtcgggagccggtgagtgttcataaaagcttccaggcg
agctctcctccaaggacaagagaccaacagccctccactctgaaatggatttataatgcg
agttacacagacacgtccaatgtagcagccctagccttgccaaaactacccttgaatctg
tctaacaagtccatatacaacggacccggaatggtgtttgccgtggctttccatgacggc
agcatcaaacttttgcacagagtctccttgaagccatttgctgtgttcaagtatgaagga
gtgaagcaggagtcaggcccacaactgaagagacagaagaacagcaataatggtaaacaa
ctgtcatgtattgagatgtcggccacatgctgcagtctgattggtgttgacaagagtggt
acgctatgtcttatgaagattgctccaacgcttgggcaagcacttgatccaggtgcagca
agggcccataccattgcacaggtagttaatctgttagagtattgtatggtgacctgctat
gactggtgggatctactgcttactattacaccaggtatggtagaaacagttatagacaga
cttagcgaagctttcaacagacaacctaaatcactgcaggaattactgttcaccagactc
actgctgtcaaggcaacactgtacaggctaaatatcagtggaacaggtaaatcagccgac
tgccatgccaaactactgctccatgccatcgctgtcacattcaaatccttgctgagacct
acctcactctccagccaagagaaaggacttgcagagaaacttgcagctgtgtgtgcaagg
agtgtagaaactgaccttgacaagataatgatgaacttagatacaaaggaatttgtaatt
gaacctgccacagtccagtcccttcaacagttgatacagtgggttgctgactttgctctc
ttcttgttgagcaatgtacctctccaacagatgtactccaacagacctgggcttagtatg
ctaagagactggtcagtgttgtgcactttgagggaactgcttgtcatcattcgtatctgg
ggattgatcaaatccacttgtcaaccagtcttcacttccacgtcagataatgtcgatggt
ctttcaacactcttcaaattgttgacgcaagtctggctctgctgtaaagatgactcctac
tcagagtttgatgatgccttaatagatgagtgtattttactgccaagtcagttactcgtt
ccaaacctggaaagtctgcctgtggttgaaggcataactggcaaaatcactggcaaactg
ccaatgagtttccactttgaaagcacaccactccacattccccatgtcaccagtttcaac
ccgggggccacacctggctctgaactcacaaccaggcttatgactgacaagcactgccac
aaacacgatattgtcaggagaatccatctaggagtggcaccccatgatgagctgaagcag
tgcacaaggtgttcatgtgtttcactggtgaagtcaacagcccagactcctgccctcaag
gcctgggatcagagatgggtgaaagcctgtgtctgtggtggacagtggagaaaacttgac
ctgccccagcccatgtga
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