KEGG   Ptychodera flava: 139140535
Entry
139140535         CDS       T10724                                 
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
pfll  Ptychodera flava
Pathway
pfll03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pfll00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139140535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pfll03041]
    139140535
   03036 Chromosome and associated proteins [BR:pfll03036]
    139140535
Spliceosome [BR:pfll03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    139140535
 Complex B
    139140535
 Complex C
   U2 SnRNP specific factors
    139140535
Chromosome and associated proteins [BR:pfll03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    139140535
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG UNC45-central
Other DBs
NCBI-GeneID: 139140535
NCBI-ProteinID: XP_070565971
LinkDB
Position
9:27817718..27837340
AA seq 1307 aa
MAATTREELEQQIRDIQSKKAQLPKSGIEKGDRVELGVGGHFDQDIYGSVGSRFEGYVTS
IATNEADDDDDEEVGPGTLMGKRSNYTAPASVLNDIQRSAVDYDPFAEHRIPKIADREDE
YRARRRQMIISPERHDPFAEDGKTPDPKTRTYAEVMVEQTLRADQLEIRSKLHEKAKAGE
LTAVNGAVQVPAKPAKKRRWDQPGEETPGATPKKKTSSWDQAESTTPAHTPSSTRWDETP
GRPKGSETPGATPGVSTRVWDATPGHLTPGHVTPGHTGGHATPGHSATPSARRNRWDETP
RTERETPGHGSGWAETPRTDRGDTITETPTPGASSRRRSRWDETPANQMGGSTPVMVQGV
TPTGQKAMAMATPTPGHLMQMTPEQMQAYRWEKEIDERNRPWTDEELDSLFPEGYKVLPP
PAGYVPIRTPARKLTATPTPMSGTPGFRIQVEDPSAIMVXEQPPGNLPFLKPDDAQYFDK
LLVDVDESTLSPEELKERRIMKLLLKIKNGTPPMRKAALRQITDKSREFGAGPLFNQILP
LLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREII
SNLAKAAGLATMISTMRPDIDNLDEYVRNTTARAFAVVASALGIPSLMPFLKAVCRSKKS
WQARHTGIKIVQQIAILMGCAILPHLRNLVEIIEHGLVDEQQKVRTITALALAALAEAAT
PYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREF
QSPDEEMKKIVLKVVKQCCATDGVESQYIKDEILPHFFKHFWQHRMALERRNYRQLVDTT
VELANKVGAAEIIGRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDSRLEEQLIDGIL
YAFQEQTTEDVVMLNGFGTVVNALGKRVKPYLPQICGTILWRLNNKAAKVRQQAADLISR
IAVVMRTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLL
PRLTPILKNRHEKVQENCIDLVGRIADRGSEYVSAREWMRICFELLELLKAHKKAIRRAT
VNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYR
VPELNVQNGVLKSLSFLFEYIGEMGKDYIYSVAPLLEDALMDRDLVHRQTACAAIKHMAL
GVYGFGCEDALIHLLNYVWPNIFETSPHVIQAVMDAVEGLRVGLGAIKLLQYTMQGLFHP
ARKVRDVYWKIYNTLYIGAQDALVAGYCRVTNEEKSTYVRNELDYFL
NT seq 3924 nt   +upstreamnt  +downstreamnt
atggctgccactacaagggaagagttggagcagcagatccgagatatccagtctaagaag
gctcaactaccaaagtctggtattgagaaaggggaccgagttgaattgggagttggtggc
cactttgatcaagatatctatggcagtgtcggcagtagatttgaaggctatgtgacatca
attgcaacaaatgaagcggatgatgatgatgatgaagaagttggccctggcactttgatg
ggcaaaagaagcaactacactgcaccagcctcagtgttaaatgacattcaacgaagtgct
gtggattatgatccatttgctgagcaccgtataccaaaaattgcagacagggaggatgaa
tatcgagcgagaagacgtcagatgatcatatctccagagagacatgatccatttgcagag
gatggcaagactccggatcccaaaacacgtacctatgctgaagttatggttgagcaaact
ttgagagcagatcagcttgaaataagaagcaaattacatgagaaggccaaggctggtgag
ttgacagctgtgaatggggctgtgcaagtacctgcaaaaccagcaaagaaacgtcgttgg
gatcaaccaggtgaagagacaccaggcgcaacaccaaagaagaaaacttcaagttgggat
caggcagaatctacaacaccagcacacactccatccagcactcgctgggatgaaacacca
ggtcgtccaaaaggtagtgagacacccggtgccacacctggtgtcagcacacgtgtttgg
gatgcaacaccaggtcacctgacccctggccatgtcactccgggtcacacaggtggtcat
gcaacaccaggtcacagtgcaacaccaagtgctaggagaaacagatgggatgaaacacca
agaacagaaagagaaacccctggtcatggtagtggttgggctgaaacaccccgcacagat
cgtggggataccataacagagactccaacaccaggtgcttcatcaagaagacgatcacgt
tgggatgagacccctgccaatcaaatgggtggttccacacctgtcatggtgcaaggtgtg
acacctacaggacagaaagccatggcaatggccactccaacaccaggtcacttgatgcag
atgacaccagaacagatgcaggcctacaggtgggagaaggaaattgatgagagaaacaga
ccatggactgacgaagaactcgattccctcttcccagagggatacaaagtcttgccacca
ccagcaggatatgtcccaatcagaactccggcccgtaaactgacagccactccgacacct
atgagtggcacaccaggtttccgcattcaggtggaggacccctcagccatcatggttntg
gagcagcctccaggaaacttaccgttcttgaaaccagatgatgcacagtattttgacaag
ttactggttgatgttgatgaaagcacactaagtccagaagaattgaaggagaggcgtatc
atgaaactgcttctgaagatcaagaatggaacccctccaatgcgtaaagcagctctgcgt
cagatcacagacaagtcaagagaattcggtgcaggcccattattcaatcagatcttacca
ctactgatgtctccaactttagaagatcaagagcgtcacttgttagtgaaagttatcgac
agaattttatacaaacttgatgacttggtcagaccctatgtgcacaagatccttgtcgtc
attgaaccattgttgattgatgaagactactatgcccgtgttgaaggtcgtgagatcatt
tccaacttggcaaaggctgccgggttggccaccatgatctcaaccatgcgtcctgatatt
gacaacttggatgagtacgtacgtaacacaacagcccgtgccttcgctgtggtagcctct
gcccttggtataccgtctctgatgcctttcttgaaggctgtgtgcaggagtaagaaatcc
tggcaggctagacataccggtattaagattgtacagcagattgctattctcatgggatgt
gccatattgcctcatttgaggaatttagtggagatcatagaacatggtcttgttgatgaa
caacagaaagtccgtaccatcactgctttggctttggctgcgttggcagaagcggctact
ccgtacggtattgaatcctttgacagtgtactcaaaccactgtggaaaggtatcagacag
cacagaggaaagggtctggcagctttcttgaaggctattggttacctgatccccttgatg
gacgcagagtacgccaactactataccagggaagtcatgttgattttgatccgagaattt
cagtctccggatgaggaaatgaagaagattgtgttgaaagtagtgaagcagtgttgcgcc
acagatggtgtggagtcacagtatatcaaggatgaaatcctaccacactttttcaaacat
ttctggcagcatagaatggctttggaaaggagaaattacagacagcttgttgacactaca
gttgagttggccaacaaagtaggggcagcagagatcattggcaggatagttgatgacttg
aaggatgaagctgaacagtatcgtaagatggtgatggaaaccattgaaaaaatcatgggt
aatcttggcgcagcagacattgactccaggctagaagaacagcttattgatggtatcttg
tatgcgttccaggaacagacaactgaggatgttgtaatgttgaatgggttcggtaccgtt
gtcaatgcacttggcaagagagtgaagccatacttaccacagatctgtggtacaattcta
tggcgtctcaacaacaaggctgctaaagtcagacaacaggctgctgatctcatctccaga
attgctgtggtcatgaggacatgtcaagaggaaaaactgatgggccatttaggtgtagtg
ttatacgaatacctgggagaggaataccctgaagtgttgggtagtatcctaggagcgctg
aaggccattgtcaatgtcattggaatgcacaagatgacaccaccaatcaaagatttactg
ccacgtctgacacccatcttgaagaacaggcatgagaaggtacaagagaactgcattgat
ctggttggcagaatcgctgacagaggttctgagtatgtgtcggcacgtgaatggatgaga
atctgttttgagttgctggaattgcttaaagctcacaagaaagcaatcaggcgagccact
gtcaacacatttggctacattgcaaaggctattggcccacatgatgtactggccactctt
ctcaacaacctgaaggtacaagaacgtcagaaccgtgtgtgtactacggtagctatagcc
attgttgccgagacctgttcaccatttacagtactgccagcactgatgaatgagtacagg
gtgccagaattgaacgtccaaaacggtgttctcaagtcactgtccttcctctttgagtat
atcggcgaaatgggaaaagactacatttattctgtggcaccattattagaagatgcactc
atggacagagaccttgttcacagacagactgcatgtgcagctatcaaacacatggcactt
ggtgtgtatggatttggctgcgaggatgcactgattcatttactcaactacgtctggccc
aatatatttgagacgtcacctcatgtgattcaggctgtgatggatgcagtggaaggcctc
agggttgggcttggtgcaatcaaactcttacagtataccatgcaaggattgtttcatcca
gctaggaaggttcgagatgtgtattggaagatctacaacaccttgtacattggtgcacag
gatgctcttgtggctggttactgcagggtcacaaatgaggagaagagcacatatgtacga
aatgaactggattacttcctgtag

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