Ptychodera flava: 139140782
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Entry
139140782 CDS
T10724
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1-like isoform X1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
pfll Ptychodera flava
Pathway
pfll04148
Efferocytosis
Brite
Membrane trafficking [BR:
pfll04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
139140782
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Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
DUF3887
TPR_1
TPR_2
Motif
Other DBs
NCBI-GeneID:
139140782
NCBI-ProteinID:
XP_070566293
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Position
9:34176378..34205736
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AA seq
862 aa
AA seq
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MSIKAFELVPAIERLQLMGEKAKTAIECIECCGKNLYIGSSDCFVMHFLLEEKTQHNGKV
TVTSKKQSHKYLAVRKPIVQLKAASALTRILVLCDNTLALLHMFNLEPIMSGAKIKGVTS
FCVNENPTTSNPFSIQVCVATKKKALHLYTVTEDKMIAHKEISTSDIPVTMDIDSHFICV
AESTQYVMINFESNEPTDLFPYDAEQTNPMVKRISQGEFLLSGPSALGMFVTSEGVSQRP
PLQWSSNVMATGFTFPYVCALDDEFITVHSILDQQQKQTISFQGGKIMNNFEGKVYVAST
KEVYMLIPVPVDKQIQELLNDKRVEEALTLAKNAKKAGMSREKFQKIFYRIQQQAGFIEL
SQYHFKEAAELFKAGRLDVRELINLFPLLLPANSNFTRSVPLLHEFADINQIVRHNKERL
AECKEFLISYLKDIRGTRFAVGYKEEVDTALLKLYAEINAPELVELISSDNGCVFENCIE
TLNKYGRYFALGLLYKYHGDFEKALQIWTEIVDGKREDTSFPGLEFVVDFLASLSDHELV
WRYVDWAIKKDELLGIKIFTDRPKNEVPSERLRPDDIIDYLHRYPRAVIRYLEYLVFTKR
LEKEKYHTHLAVLYLDSVLQLRKNEDTSKEQLDLARSKLRHMLQTSVLYRVQLILGKVKE
TDMYAECAILYGKLEEHDKALRILVYKLKDYGAAENYCDVNSSSKDKTYRRRLYQILLSV
YLDPLEGPKDALIGPAITLLNSNSSEFDISRVLQILPENWSIGLLQHFLSKAVRTNMHTC
RSTKIERMLARGENLQLKAQTIRETRIPVTMSDDSRKCAVCSRPFNEPSFARFPNGVITH
TQCARNKYVCPISGNVFSTKKS
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcaaagctttcgagctggtacctgccatcgagcgcctacagctgatgggagaa
aaggctaaaacagcgattgagtgtattgaatgctgtggtaaaaatctgtacattggatca
agtgattgttttgtgatgcactttctgttggaagagaagacacagcacaatggcaaagtc
actgttaccagcaagaaacaaagtcacaaatacttagcagtgagaaaacctatagtgcaa
ctgaaggcagcgtcagcattaacgaggattttagttctctgtgacaacactctggccttg
ctacacatgtttaatttagagcctattatgagtggagcaaaaattaaaggggtgacctca
ttctgtgtaaatgaaaacccgacaaccagcaatccatttagtatacaggtctgtgttgca
accaagaagaaagctttgcatctgtacacagttactgaagataaaatgattgctcacaaa
gaaatatcaacctctgacattccagtaaccatggacatagatagccattttatttgtgtt
gctgaatcaacacagtatgtaatgatcaactttgagagcaatgaaccgacagatctcttc
ccatatgatgcagaacagacaaatccaatggtcaaaagaatcagtcagggtgaattttta
cttagtggtcccagtgcacttggtatgtttgtgacgtcagagggtgtatcacaacgaccg
ccactgcaatggtccagtaacgtcatggcaacagggtttacatttccatacgtctgtgct
ttggatgatgagttcattactgtgcatagtattttagatcaacagcaaaaacagaccatt
tctttccaagggggaaaaataatgaataactttgaaggcaaggtgtacgtagcgtcaacc
aaggaagtctatatgcttataccagtgccagttgataaacagattcaggagcttttgaat
gataaacgagtggaagaagccttgaccttggccaagaatgccaagaaagctgggatgagt
cgagaaaaatttcaaaagatattttatcgtattcaacagcaagcaggttttattgaactt
tcacaatatcatttcaaggaagcagctgaactcttcaaagctggcagacttgatgtcaga
gagttaatcaatcttttcccgttattacttcctgccaattccaattttacaagatctgtt
ccacttctacacgagtttgcggatattaatcagattgtccgccacaacaaggaaaggttg
gcggaatgcaaagagttcttgatttcgtacttaaaagacatccgaggaacaagatttgca
gttggttacaaagaggaagtggacacggccttgttgaagttgtatgctgaaatcaatgca
ccagaattagtggaactgatttcatcagacaacggctgtgtctttgaaaattgcatcgaa
acactgaataagtatggcagatactttgcgttgggtttgctgtacaagtaccatggagat
tttgaaaaagcactgcaaatatggactgaaattgttgatggaaagcgcgaggatacgtca
tttcctggtttagagtttgtagttgactttcttgccagtcttagtgatcatgaattagtt
tggagatacgtagactgggccatcaaaaaagatgaactacttggaatcaagattttcacc
gacagacccaaaaacgaggtcccaagtgaaaggttacgacccgatgacatcatagactat
ttacatagatatcccagagctgttatcagatatttagaatatctggtcttcaccaagaga
ctggagaaagaaaaataccacacccacctagcagtactatacctagattcagtgctacaa
ctcaggaagaatgaagatacgtcaaaggaacagttagatctggccaggtccaagctaaga
cacatgttacagacatcggtgctgtacagagttcagttgatactgggaaaagtgaaagag
actgacatgtatgcagaatgtgcaatactttatggcaagctagaagagcacgacaaagct
ctcagaattcttgtctacaaactcaaagattacggagcagctgagaattactgtgatgtc
aactcatccagcaaagataagacttacagacggagactgtatcaaatcttactcagtgtc
tacctggatcctcttgaaggaccaaaggatgcattgattggtccagcaataacgttgtta
aacagtaattcttctgaatttgacattagcagggttcttcaaattctgccagagaactgg
tccataggactgctacaacacttcctatccaaggctgtcagaactaacatgcacacatgc
agatctacaaagatagagaggatgctggcaaggggagagaatttacaactgaaggcgcaa
accatcagagaaacgagaattccagttactatgagtgatgacagcaggaaatgtgctgtt
tgcagtcgaccgtttaatgagccatcttttgcaagatttccaaatggagttatcacccat
acgcagtgtgccaggaacaagtacgtgtgtccaatatcaggcaatgtgttcagcaccaag
aagtcgtag
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