Ptychodera flava: 139140913
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Entry
139140913 CDS
T10724
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
pfll Ptychodera flava
Pathway
pfll03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139140913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfll03019
]
139140913
Messenger RNA biogenesis [BR:
pfll03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
139140913
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
139140913
NCBI-ProteinID:
XP_070566494
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All DBs
Position
9:38292654..38303794
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AA seq
309 aa
AA seq
DB search
MHALAAQPRLGGNPLPTPAVTAAMAQVDREKIYQWIVELSNPETRENALLELSKKREVVP
DLAPMLWHSFGTVAALLQEIVNIYPYINPPHLTAHQSNRVCNALALLQCVASHPETRSAF
LQAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQDVITFLLTTEIIPLCLRI
MESGSELSKTVATFILQKILLDETGLSYICQTYERFSHVAMILGKMVLQLAKEPSARLLK
HVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAAVLKDDNSTKRWLAQLIKNLTDTSVAT
PGGIPLPAQ
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccttagcagcccaaccgagattaggtggcaatccattaccaacacctgcagta
acagcggcaatggcccaggttgacagggaaaaaatttaccagtggattgtggaactatct
aatcctgaaacaagagaaaatgccttattggaactcagtaaaaaacgggaggttgttccg
gacctagctcccatgctatggcactcatttggtacagtggctgcattacttcaagagatt
gttaacatttacccatacatcaaccctcctcatcttacagcacaccaatcaaaccgtgtt
tgtaatgccttggctttactacaatgtgtagcatctcatccagaaaccagatcagcattc
ctgcaagcccacatacctttgttcctgtatcccttccttcacacagtcagtaaaaccaga
ccttttgagtaccttaggttaactagcttaggtgtcattggagcactagtcaagaccgat
gaacaagacgtgataacatttctgcttacaactgagatcatcccattgtgcttaagaatc
atggaaagtggtagtgaactctccaaaactgtagcaacatttattttacaaaaaatcctg
ctggatgaaactggtttgtcgtacatttgccaaacatatgaaagattttcacatgtagca
atgattttgggtaagatggtgttacaactggccaaagaaccttccgctagacttctgaaa
catgttgtcaggtgttatttgaggctgtcagacaatccaagagcaagggaagccctgcgc
cagtgtctgccagaccagttgaaggacactacctttgctgctgtcctgaaggacgataac
tccacaaagcgctggttggcacagctcatcaaaaacctaacagacaccagcgtggccact
ccggggggtatccctctaccagcccaatga
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