Ptychodera flava: 139141722
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Entry
139141722 CDS
T10724
Name
(RefSeq) probable ribonuclease ZC3H12B isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pfll Ptychodera flava
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfll03019
]
139141722
Messenger RNA biogenesis [BR:
pfll03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
139141722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
KH_N4BP1_1st
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
HSP9_HSP12
Motif
Other DBs
NCBI-GeneID:
139141722
NCBI-ProteinID:
XP_070567434
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Position
10:complement(1953171..1972387)
Genome browser
AA seq
901 aa
AA seq
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MEKEVEFVVPLESIGFLKKNQGRVEELFRVCVLLANLVAEGHSSGQQWIRVVARSDTDGS
STVEKAKDYILSLCDPQYRREETYPAEYDSYLRRCRDTIEQNSQAVITFTDRHSVIISGD
EFKVIIACSLFEEEIKNAQSGLCHDEDYTDSAAIFVEEAPRLSPAVKSSSKDLHDNDSDT
YTHDGVTKYTDEQQSTCIDQTCADQKTKNNNYKFSGITQSDGLPGSTKTTDHNETLSKQI
DFAAKLGYSESQVFQVLRQRGTDVDQNDLLHALVKMTKPEPDEKTMAQESNSQMFDIPEQ
MPAEQIIEDDSSNLRPIIIDGSNVAMSHGNKEVFSCRGIAIVVDWFIKRDHPDIKVFVPQ
WRKEASKPDTPITEQEILNELEKDRIIVWTPSRRINGRRVVCYDDRYIVKTAIDMDGIIV
SNDNFRDLQNENPDWKKFIEERLLMYSFVNDTFMPPDDPLGRHGPSLENFLRKNPTAPEP
QAPPCPYGKKCTYGNKCKYYHADRPQGQKSVSEKLQEQAKTRKEVRARGVQPRSTADVPT
TTIPTSGGELKKNVSPQNSSNLGERRYANFSKAHQGMTSDVPRELRPDSGRLEQARYDPY
SEQIQNPTYRPVPFIREPYPYPKAHTEPLQAYHRIPPTAQHYQHLPHTVELYRRDMYSNQ
PRYDPCDEMTTDMRKMKMGDHGGYHGGFPYNGQSAMPQYPRETYRHPPLSRQPSYHQPEM
FPPQMHLHPDYHTESHSLHPNVTRLRSYPVEGAIPNICEPRPNMTRQNSTSDPQLYQDDV
RLGSGRVYKADGEHNQWCGEQMYSGGKPPSRNGSEPILWPKPANQPVRLSSAQRIERPTN
IGPPPTVNKDIPFQPNDPRYNIFHNLSSIFPREDIIEAMKNHPEEMDPQKICGYIINKKS
L
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagaagtcgagttcgtcgtacctctcgaaagcatcgggtttttaaagaagaat
caggggcgagttgaagaactatttcgtgtgtgtgttttactggccaatctggttgcagaa
ggccatagcagtggccaacagtggatccgagttgttgcccgaagtgacacagatggtagt
tcgacggttgagaaagccaaggactatatcttgtcactctgtgatccacaatatcgaaga
gaagaaacatatcctgcagaatatgattcatatttgagacgttgccgggataccattgag
cagaactcacaagcagtaataacatttacagatcgacattcagtgattatcagtggtgat
gaattcaaagttataattgcatgctcactttttgaggaagagatcaagaatgcacaaagc
gggctttgccacgatgaggattatactgattcggccgctatattcgttgaagaggctcca
agactatcaccggcagtaaaatcttcatcaaaagacttacatgacaatgattctgacact
tatacacatgatggtgtgacaaaatatactgatgaacaacagagtacttgcattgaccag
acttgtgcagaccagaaaactaagaacaataattacaaattcagtggtattacacaaagt
gatggtttaccaggatccacaaaaaccacagatcataatgaaactttgagcaagcagatt
gactttgctgcaaaacttggctactcagagtcacaagttttccaagttttacgccagcgt
ggaactgatgtagatcaaaatgatctccttcatgcattggttaaaatgaccaaacctgaa
ccagatgagaaaacaatggcacaggaatcgaattcacagatgtttgatatccctgaacaa
atgccagcagagcagataatagaggatgatagttccaacctaagacccattattattgat
ggtagcaatgttgccatgagtcatggtaacaaagaagtattttcatgtcgtggtatagcc
attgttgttgactggttcattaaacgtgatcatccagacatcaaagtatttgtaccacag
tggaggaaagaagcttcaaaaccagatacaccaattacagagcaagaaatattaaatgag
ttggagaaagatcgaattatagtgtggactccctctcgacgtataaatggccgtcgtgtt
gtgtgttatgatgatcggtacattgtgaaaactgcaattgatatggatggcatcattgtg
tcaaatgataacttcagagatttacagaatgaaaatcctgactggaagaagtttattgaa
gagagattgctgatgtattcatttgttaatgacacatttatgccacctgatgatcccctc
ggcagacacggaccaagcctcgaaaatttcctcagaaagaaccccactgctccagaacca
caggcacctccttgcccatatgggaaaaagtgtacctatggaaataagtgtaaatattac
catgcggatcgtccacagggccagaagagtgtcagtgaaaagttacaggagcaggcaaaa
accaggaaagaagtgcgtgctagaggtgtacaaccaaggagtactgctgatgtgccaact
acaacaataccaacatcaggtggcgagttgaaaaagaatgtcagtcctcagaactctagc
aacctaggagaaagacgttatgctaatttttcaaaggcacatcaaggaatgacaagtgat
gtaccaagggaactcagacctgacagtggtaggcttgaacaagcacgatatgatccatat
tctgagcaaatacaaaatccaacataccgcccagtaccattcatacgagaaccatatcca
tatccaaaagcacatactgaacctcttcaggcatatcacagaattccaccaacagcacaa
cactaccaacatttacctcacacagtagaactgtacagacgggatatgtactccaaccaa
ccaagatatgatccttgtgatgaaatgactactgatatgagaaaaatgaaaatgggcgat
catgggggttaccacggtggattcccatacaatggacaaagtgcaatgccacagtatcca
agggaaacatacagacatccacctttatcgcgacaaccaagctatcaccagccagaaatg
tttccaccacagatgcatctccaccctgactaccatactgagtcacacagtctccatcca
aatgtaacacggttaagaagttaccctgtagagggggctataccaaacatttgtgaacca
cgaccaaacatgaccaggcaaaacagcacatcagatcctcagctctaccaagatgacgta
cgtttaggaagtggcagagtctataaagcagatggggaacacaaccaatggtgtggtgaa
cagatgtacagtggtggaaaacccccatctcggaatggtagtgaaccaattctttggccc
aaacctgcaaatcaaccagttagactgtcatcagcccagcgtatcgaacgccccacaaac
attggtccacctccaactgttaataaggatataccatttcaaccaaatgatccaagatac
aatatctttcataatctttcatcaatattcccaagagaggatatcatagaagcaatgaaa
aaccatccagaggagatggatccacagaaaatatgtggctacattatcaataagaagagt
ttataa
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