Ptychodera flava: 139141868
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Entry
139141868 CDS
T10724
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
pfll Ptychodera flava
Brite
Chromosome and associated proteins [BR:
pfll03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
139141868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
LIG3_BRCT
DEAD
BRCT
BRCT_2
SWI2_SNF2
PTCB-BRCT
AAA_22
Motif
Other DBs
NCBI-GeneID:
139141868
NCBI-ProteinID:
XP_070567712
LinkDB
All DBs
Position
10:6550009..6567367
Genome browser
AA seq
1031 aa
AA seq
DB search
MDRIRRKLNEINEKIDVTKHRVSEEKLGQSGLTGITLRPYQLEGVNWIIERYHRNHGCIL
GDEMGLGKTCQTISFLTYLHGKGSCKGPCLIVSPLSVIPNWRNELTRFAPKLSLEVYIGD
KDKRAEMREEMDDFDVLLTTYELCLKDTAFLSKHSWFVLVVDEAHRLKNQNSLLYQTLSE
FDINHRVLLTGTPVQNNLTELYALLCFVAPTIFRIKYCEEFVDTFSDIKDDSKEAAELHA
LLQPFLLRRVKSEVVLDLPKKSEVLLYHNLTELQKKYYKAILMKDIEAFQNPDGSNKTRF
NNILVQLRKCVNHPYLFDGVEPEPFELGEHLIKASGKLHLLDQLLSFLKARDHKVLLFSQ
MTRMLDILQDYLGYRGYNYERLDGSVRGEERFLAVQNFNKQEDTFIFLLSTKAGGQGLNL
VSADTVIFVDSDFNPQNDIQAAARAHRIGQTKPVKIIRLVGKDTVDEIILKRADAKLKLT
NTVIEGGQFSLGASNQAETPQSLSDMLKFGLDKLFGSTEKGITEKDLQRILGASVNGEWQ
LEEEEEEAVAMESDEDEEEAEDVNMYVFEGKDYSRPCTTSDEKAFDELMAAELETRKKTL
AAPMTLRKYRTAPELAVAQLPTRKRKELTDEEKAERARKRKEAAAKRARLQEEEEIRKAQ
ERRKRRDEMWKAKGYESCNIAMETDSEDEEEEEGGTDIVLGTLDEEKYVKTAINYVSGDV
THPVNTEGEDAIIVHCVDDSGRWGSGGLFSAISARSPQPAQQYQVAGQMQDLALGDAHMI
GIDDLQSREDGRDVVALIVAQHRDRQNRLSGIKLLALSQGLQRVYKEAKKKSASVHLPRI
GYATPGFNWYGTERLIRKHLAAKGIPTYIYYFPRKNRNKTSSRKNSLTGQSSDDPKPSTS
LDTPARKKNSVQSDTDEEGSDPGPSTSHDATVNTQSSFLPDFLAGVTVYFHNISEEDQKK
VTRFLVAYDGCVDDQVTIDTTHLIGNSDEDCDVLQSLGDKNSKMKMVSMQWLEDCIAKNK
KLSEDPYRIDV
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtattcgtagaaaactgaacgagattaatgagaagatcgatgtgaccaaacac
agagtgagcgaagagaaacttgggcaatcgggattgacaggaatcactctcagaccttat
caacttgaaggcgtcaactggatcatcgagcgttaccatagaaaccatgggtgtatcctt
ggtgatgagatgggccttggtaaaacatgccagacaatatctttcctgacatatctccac
ggaaagggttcatgtaaaggtccatgtctgatagtcagtcctctgtctgtgattcctaat
tggaggaatgaattaacaagatttgcacccaagctgagtcttgaagtttacatcggtgac
aaggacaagagagctgagatgagagaagagatggatgactttgatgttcttcttacaaca
tacgagctgtgccttaaagacactgcatttctcagcaaacattcctggtttgtattggtt
gtggatgaagcgcacagactgaaaaatcaaaactcacttctttatcagactctgtcagag
tttgatataaatcacagagtgttgttgactggtacaccagtacagaacaacctgacagag
ctgtatgccttgctgtgttttgttgcaccgactatattccgtatcaaatactgtgaagag
tttgtggatactttcagtgacatcaaagatgatagtaaagaagcagcagagttacatgca
ttgttgcagccatttctactgagaagagttaagtcagaggtggttttggatttaccaaag
aaatctgaagttctcctctaccacaatctgacagagttacaaaagaagtactacaaagcc
atactgatgaaagatattgaggcatttcaaaatcctgatggttcaaataagacaagattc
aacaatatcttggtacaactcagaaagtgtgtcaatcatccgtatctctttgatggagtt
gaaccagagccctttgaacttggtgaacatctgatcaaagccagtggaaaacttcatctt
cttgatcaactcttgtcatttctgaaagccagggatcacaaagtgttgctgttttctcag
atgacaagaatgttggacattctgcaggattatcttggatacagaggttacaactatgag
agattagacggctcggtgagaggagaggaaagatttcttgctgtgcagaatttcaacaaa
caagaagatacatttatattcctactcagtactaaggcaggcggtcagggtctgaatcta
gtcagtgcagacactgtcatctttgttgacagtgacttcaatcctcagaatgacatccaa
gcagcggcaagagctcacaggattggtcagacaaaaccagtcaagataatccggctggtt
ggcaaggatacagtggatgagattattctcaagagagctgatgcaaaactgaaactgaca
aatactgtcatagagggcggacagttttccctgggagcttcaaaccaagctgaaacacca
caaagtctttcagatatgttgaagtttggactggataagttatttggctctactgaaaaa
ggcatcacagagaaagacctgcaaaggattctgggagcaagtgtgaatggagagtggcag
ttagaggaggaggaggaagaggcagttgccatggagagtgatgaagatgaagaagaggct
gaagatgtcaacatgtatgtctttgaaggcaaggattattccagaccatgcactacttct
gatgaaaaagcgtttgatgaactcatggcagctgagctagaaactaggaagaagacatta
gcagcacccatgacattacggaagtaccggactgctcctgaattggcagtggcacaactt
ccaacaagaaaacggaaagaactaactgatgaagaaaaagctgagagagcaaggaagaga
aaagaagcagcagccaagagagcaagacttcaagaagaggaagaaatcagaaaagctcag
gaaagaaggaaaagaagggatgagatgtggaaagccaaaggctatgaaagctgtaatatt
gccatggaaacagactctgaagatgaagaggaggaggagggaggcactgatattgtcctt
ggaacattggatgaagagaagtatgtgaagacggctataaactatgttagtggtgatgtt
acacatcctgtgaacacggagggtgaagatgctatcattgtacactgtgttgatgacagt
ggtagatggggaagtggtggattattttcagcgatatcagccagatcaccacaaccagca
cagcaatatcaagtagctggtcaaatgcaagatctagcattgggagatgcacacatgatt
ggaattgatgatttgcaaagcagggaagatggtagagatgtggtggctttgattgtagct
cagcaccgtgacagacagaacagactgtctggaattaaactactagcactcagtcaaggc
ttacagagagtttacaaagaagccaagaaaaaatcagccagtgtacatctgccacgtatt
ggatatgctactccaggttttaattggtatggtacagaacggttgatacgcaaacatcta
gcagcaaagggtataccaacatacatatattactttccaaggaagaacagaaataaaaca
tccagcaggaaaaactcactgacaggtcaaagcagtgatgaccccaaaccttctacatcc
cttgatacaccagcaagaaaaaagaattcagttcagagtgacacagatgaagagggcagt
gaccctggaccatctacatcccatgatgcaactgttaatacccagagttcatttctacct
gactttttggctggagtaactgtgtattttcacaacatcagtgaagaggaccagaagaaa
gtgactagattccttgtggcttatgatggctgtgtggatgaccaggttaccatagatacg
actcatctcatcggcaacagtgatgaggattgtgatgtgttgcaatctttgggtgacaag
aattcaaagatgaaaatggtttccatgcagtggttggaggactgcattgcaaagaacaag
aaactgtcagaggatccatacaggatagatgtgtga
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