KEGG   Ptychodera flava: 139142866
Entry
139142866         CDS       T10724                                 
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
pfll  Ptychodera flava
Pathway
pfll03082  ATP-dependent chromatin remodeling
pfll03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pfll00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    139142866
   03083 Polycomb repressive complex
    139142866
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pfll03036]
    139142866
Chromosome and associated proteins [BR:pfll03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     139142866
  Histone modification proteins
   HAT complexes
    HATB complex
     139142866
   HDAC complexes
    Sin3A-HDAC complex
     139142866
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     139142866
    PRC2.2
     139142866
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     139142866
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    139142866
  Chromatin remodeling factors
   NuRD complex
    139142866
   NuRF complex
    139142866
   NuRF complex (fruit fly)
    139142866
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 WD40_WDHD1_1st EIF3I Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_WDR19_1st eIF2A Beta-prop_RIG_1st WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_SPT8 NBCH_WD40 MIOS_WD40 Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 139142866
NCBI-ProteinID: XP_070569141
LinkDB
Position
10:43200141..43217782
AA seq 427 aa
MADKEGETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVQRPEGK
DYSVHRLVLGTHTSDEQNHLLIASVQLPNADTQFNASQYDSEKGEFGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKE
GYGLSWNPNMNGHLLSASDDHTICLWDINQVPNENRVIDAKTIFTGHTAVVEDVSWHLLH
ESLFGSVADDQKLMIWDTRSTNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSAEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPETPAS
ELEPSTS
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggcggataaagaaggagaaacatttgatgatgctgtggaggaaagagtgatcaatgaa
gagtacaagatttggaagaaaaacaccccttttctgtacgacttggtcatgacacatgca
ttagaatggccaagtcttacagcacagtggttgccagatgtacaaaggccagagggaaaa
gattattccgttcatcgacttgtacttggcactcacacgtcagatgaacagaatcactta
ctgatagccagtgtacagcttccaaatgcagacactcagttcaatgcatcacagtatgac
agtgagaaaggagaatttggtggctttggctcggtgagcggcaagattgagatcgagatc
aagatcaaccatgaaggtgaagtgaacagagcaaggtacatgccgcagaatccctgtgtg
attgcaaccaagacaccatccagtgatgtcttagtatttgactacaccaaacatccttcc
aagccagatcccagtggtgaatgcagtccagatctgcgtctccgtggacaccagaaggaa
ggatacgggttgtcatggaatccaaacatgaatggccatctcctcagtgcttcagatgac
cataccatatgcctatgggatatcaaccaggtacccaatgaaaaccgagttattgacgca
aagactatatttacgggccacactgcagtggtagaagatgtgtcgtggcatctgctgcac
gaaagtctcttcggatctgtcgcagacgatcaaaaactcatgatctgggatacacgttca
accaatacaagtaaaccaagtcacacagttgatgcccacactgccgaggtcaactgtctg
tcattcaatccatacagtgaatttattctagccacagggtctgcagacaagactgttgca
ttgtgggatttacgtaacctgaaactcaaactccattcctttgagtcgcacaaagatgaa
atttttcaagtccagtggtccccgcataacgagacaattcttgcgtccagcggcactgac
agacgtctgcatgtttgggatctcagtaaaattggagaagagcaatcggctgaggatgct
gaagatggaccccccgagttgctgtttattcatggtggtcacactgccaagatctcagat
ttctcatggaatcccaatgaaccctgggtaatctgttctgttagcgaagacaacatcatg
caagtctggcagatggcggagaacatatacaacgatgaggaacctgaaacaccagcatca
gaactagaaccatcgacttcttaa

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