Ptychodera flava: 139143537
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Entry
139143537 CDS
T10724
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pfll Ptychodera flava
Pathway
pfll03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139143537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfll03021
]
139143537
03036 Chromosome and associated proteins [BR:
pfll03036
]
139143537
Transcription machinery [BR:
pfll03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
139143537
Coactivators
SAGA/TFTC/STAGA complex
139143537
Chromosome and associated proteins [BR:
pfll03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
139143537
STAGA complex
139143537
TFTC complex
139143537
SAGA complex
139143537
SLIK complex
139143537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_Vps41
Beta-prop_SPT8
Ge1_WD40
RMC1_N
eIF2A
PD40
PEP5_VPS11_N
Beta-prop_WDR19_1st
WD40_like
Beta-prop_DCAF12
Nbas_N
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
139143537
NCBI-ProteinID:
XP_070570065
LinkDB
All DBs
Position
11:13216468..13230273
Genome browser
AA seq
680 aa
AA seq
DB search
MADNTEGHQQTPGARVVKMEVTAPTAHKTPETDEKSMDKQTLMAVLQFLKKNNLKGTETL
LRQEANISATEDVEPSNTEQDVSSVLSAYSSEGDPSKYEEYYNNVISFVESALDRYKSEL
AQILYPVFVHMYLELVYNGHETEAQSFFDKFHGIQEEYHQEDLVKLSTVTKKEHMKSNEL
MINFRSSKFTIKMSRDSYQLLKRHLQDKQQSILLDILQEHLYIDVFDGLPRSKQQIDATA
GAMTGAARREANKTKVFYGLLKEPDINLPIEEDDDVGEGDDKPKKKKVKKDSQMGKKNKP
DPNAPPQNRIPLPELRDIDKMEKALALRETMKRVKVGSDNMPSICFYTFLNTNHGVSSVE
VSEDSSLMAVGFADSQVRVWPLTPKKLRCVKEADELMAIDKDADDVLERIMDDRSATDSR
TLLGHSGPVNATSFSPDRSMLLSCSEDGTVRLWSLQMYVNLVCYKGHNYPVWDAQFAPYG
YYFVSAGHDKTARLWATENHQPLRIFSGHLSDVDCVRFHPYSNYVATGSSDRTCRLWDVH
TGNCVRVLTGHKGPIHSIAFSPDGKHIATAGVDKTILLWDIGHGTLIGRLKGHTDTVYSL
SFSRDGTVLASGGIDNTVKLWDVNKAFGEVDTDEITNSTHITLSENTNYLLDSYPTKSTP
VLHVHFTRKNLLLAAGAYSA
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacactgaaggacatcagcaaacgccgggagctagagttgtgaaaatggaa
gtcacagctccaacagcccataagacgcccgaaactgatgaaaaatcaatggataaacaa
acccttatggccgttctgcagtttctaaagaaaaacaatctaaagggtactgaaactttg
ctgcgtcaggaggccaacataagtgccacagaagatgttgaaccatctaatacagaacaa
gatgtttcttcagtgctgtcagcatattctagtgaaggtgatccatcaaagtatgaagag
tactacaacaatgtcatttcgtttgtcgagtcagcattggacagatacaagagtgagctt
gcacagattctgtacccggtatttgtacatatgtatttggaattggtttataatggacat
gaaacagaagctcagtcattctttgataagttccatggaattcaagaagagtaccaccaa
gaagacctggttaagttatccacagtgaccaagaaagaacacatgaaaagcaatgaactc
atgataaacttcagatccagcaaattcaccatcaagatgtccagggattcttatcaactt
ttaaaaagacatttacaagacaaacagcagagcattctattggacatcctacaagaacac
ctatacattgatgtgtttgacggtttaccaagaagtaaacagcaaatagacgctactgcc
ggtgctatgactggtgctgccaggagggaagctaacaaaaccaaggtgttttatggattg
ctgaaagaaccagacatcaatctgccaattgaagaagacgatgatgttggagaaggtgat
gataaaccaaagaaaaagaaagtgaagaaagattcacagatgggcaaaaagaacaaacct
gatccaaatgcaccgccacaaaatagaataccactgccagaattacgggacatcgacaaa
atggagaaggcacttgcattgagagaaacaatgaaaagagtcaaagttgggtctgataat
atgccatctatttgcttctatacattcctaaatacaaatcatggagtatccagtgtggag
gtttctgaagattcaagtctaatggctgtaggctttgcagattcccaagtccgtgtgtgg
ccgctgacgcccaaaaagttacgatgtgtcaaagaagcagatgagttgatggccattgat
aaggatgcagatgatgtcttggagagaatcatggatgacagaagtgcaactgatagtaga
acattactaggccatagtggacctgtgaatgctacaagctttagtccagacagaagtatg
ttactgtcatgctcagaagatggaacagttcggttatggagtctccaaatgtatgtgaat
ttagtgtgttacaaaggccataactatccagtatgggatgcacagtttgccccatatgga
tattactttgtgtcagctggacatgacaaaacagccagactttgggcaacagaaaaccac
cagcctctcaggatattctcagggcatctctctgatgtagattgtgtgaggtttcacccc
tattcaaattatgtagcaactggttcaagtgacaggacatgcagactctgggatgtacat
actggcaactgtgtcagggttcttacaggacacaagggaccaattcactcaatagctttc
tcaccagacggtaaacacatagcaacagctggggtagacaagacaatactattatgggat
ataggacatggcactctcattggaaggttaaaaggacacacagacactgtgtactctctg
tctttcagcagagatggcactgtgttggcatcaggtgggatagataacacagttaagtta
tgggacgtcaataaggcatttggtgaagtggacactgatgaaatcaccaattcaactcac
attacactgtcagaaaataccaactacctactggactcctatccaactaagtctactcca
gttcttcacgtccacttcacacgaaagaatcttctcctagcagctggtgcatattcagcg
tag
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