Ptychodera flava: 139143537
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Entry
139143537 CDS
T10724
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pfll Ptychodera flava
Pathway
pfll03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139143537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfll03021
]
139143537
03036 Chromosome and associated proteins [BR:
pfll03036
]
139143537
Transcription machinery [BR:
pfll03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
139143537
Coactivators
SAGA/TFTC/STAGA complex
139143537
Chromosome and associated proteins [BR:
pfll03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
139143537
STAGA complex
139143537
TFTC complex
139143537
SAGA complex
139143537
SLIK complex
139143537
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
WD40_Gbeta
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
DSE1_N
Beta-prop_VPS8
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
CFAP251_N
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_EIPR1
PAC11
Beta-prop_WDR41
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_NOL10_N
Beta-prop_SPT8
RMC1_N
eIF2A
PEP5_VPS11_N
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Tricorn_2nd
WD40_like
Nbas_N
Tricorn_N
Beta-prop_ELP1_1st
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
139143537
NCBI-ProteinID:
XP_070570065
LinkDB
All DBs
Position
11:13216468..13230273
Genome browser
AA seq
680 aa
AA seq
DB search
MADNTEGHQQTPGARVVKMEVTAPTAHKTPETDEKSMDKQTLMAVLQFLKKNNLKGTETL
LRQEANISATEDVEPSNTEQDVSSVLSAYSSEGDPSKYEEYYNNVISFVESALDRYKSEL
AQILYPVFVHMYLELVYNGHETEAQSFFDKFHGIQEEYHQEDLVKLSTVTKKEHMKSNEL
MINFRSSKFTIKMSRDSYQLLKRHLQDKQQSILLDILQEHLYIDVFDGLPRSKQQIDATA
GAMTGAARREANKTKVFYGLLKEPDINLPIEEDDDVGEGDDKPKKKKVKKDSQMGKKNKP
DPNAPPQNRIPLPELRDIDKMEKALALRETMKRVKVGSDNMPSICFYTFLNTNHGVSSVE
VSEDSSLMAVGFADSQVRVWPLTPKKLRCVKEADELMAIDKDADDVLERIMDDRSATDSR
TLLGHSGPVNATSFSPDRSMLLSCSEDGTVRLWSLQMYVNLVCYKGHNYPVWDAQFAPYG
YYFVSAGHDKTARLWATENHQPLRIFSGHLSDVDCVRFHPYSNYVATGSSDRTCRLWDVH
TGNCVRVLTGHKGPIHSIAFSPDGKHIATAGVDKTILLWDIGHGTLIGRLKGHTDTVYSL
SFSRDGTVLASGGIDNTVKLWDVNKAFGEVDTDEITNSTHITLSENTNYLLDSYPTKSTP
VLHVHFTRKNLLLAAGAYSA
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacactgaaggacatcagcaaacgccgggagctagagttgtgaaaatggaa
gtcacagctccaacagcccataagacgcccgaaactgatgaaaaatcaatggataaacaa
acccttatggccgttctgcagtttctaaagaaaaacaatctaaagggtactgaaactttg
ctgcgtcaggaggccaacataagtgccacagaagatgttgaaccatctaatacagaacaa
gatgtttcttcagtgctgtcagcatattctagtgaaggtgatccatcaaagtatgaagag
tactacaacaatgtcatttcgtttgtcgagtcagcattggacagatacaagagtgagctt
gcacagattctgtacccggtatttgtacatatgtatttggaattggtttataatggacat
gaaacagaagctcagtcattctttgataagttccatggaattcaagaagagtaccaccaa
gaagacctggttaagttatccacagtgaccaagaaagaacacatgaaaagcaatgaactc
atgataaacttcagatccagcaaattcaccatcaagatgtccagggattcttatcaactt
ttaaaaagacatttacaagacaaacagcagagcattctattggacatcctacaagaacac
ctatacattgatgtgtttgacggtttaccaagaagtaaacagcaaatagacgctactgcc
ggtgctatgactggtgctgccaggagggaagctaacaaaaccaaggtgttttatggattg
ctgaaagaaccagacatcaatctgccaattgaagaagacgatgatgttggagaaggtgat
gataaaccaaagaaaaagaaagtgaagaaagattcacagatgggcaaaaagaacaaacct
gatccaaatgcaccgccacaaaatagaataccactgccagaattacgggacatcgacaaa
atggagaaggcacttgcattgagagaaacaatgaaaagagtcaaagttgggtctgataat
atgccatctatttgcttctatacattcctaaatacaaatcatggagtatccagtgtggag
gtttctgaagattcaagtctaatggctgtaggctttgcagattcccaagtccgtgtgtgg
ccgctgacgcccaaaaagttacgatgtgtcaaagaagcagatgagttgatggccattgat
aaggatgcagatgatgtcttggagagaatcatggatgacagaagtgcaactgatagtaga
acattactaggccatagtggacctgtgaatgctacaagctttagtccagacagaagtatg
ttactgtcatgctcagaagatggaacagttcggttatggagtctccaaatgtatgtgaat
ttagtgtgttacaaaggccataactatccagtatgggatgcacagtttgccccatatgga
tattactttgtgtcagctggacatgacaaaacagccagactttgggcaacagaaaaccac
cagcctctcaggatattctcagggcatctctctgatgtagattgtgtgaggtttcacccc
tattcaaattatgtagcaactggttcaagtgacaggacatgcagactctgggatgtacat
actggcaactgtgtcagggttcttacaggacacaagggaccaattcactcaatagctttc
tcaccagacggtaaacacatagcaacagctggggtagacaagacaatactattatgggat
ataggacatggcactctcattggaaggttaaaaggacacacagacactgtgtactctctg
tctttcagcagagatggcactgtgttggcatcaggtgggatagataacacagttaagtta
tgggacgtcaataaggcatttggtgaagtggacactgatgaaatcaccaattcaactcac
attacactgtcagaaaataccaactacctactggactcctatccaactaagtctactcca
gttcttcacgtccacttcacacgaaagaatcttctcctagcagctggtgcatattcagcg
tag
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