Ptychodera flava: 139143658
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Entry
139143658 CDS
T10724
Name
(RefSeq) protein CASC3-like
KO
K14323
protein CASC3
Organism
pfll Ptychodera flava
Pathway
pfll03013
Nucleocytoplasmic transport
pfll03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139143658
03015 mRNA surveillance pathway
139143658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfll03019
]
139143658
Messenger RNA biogenesis [BR:
pfll03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
139143658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
139143658
NCBI-ProteinID:
XP_070570253
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Position
11:16840919..16863615
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AA seq
880 aa
AA seq
DB search
MAERRRRRRLSGSDDGSDDDLLSSDNSQDRDARSDCESETGHDKDFKKSNDDENSDEYES
AEDHRSQGEEGDDDEYTDEEEGSEQDEGNVKEERTRGDGQEEKQLDTDQDRQNPQYIPRK
GPYFEHDVRYTDENKDGRSARPNIRKKLWKESEKWAHDMYREDEQAPKSREEIVMVYGFD
MRSSDHNQRGYPRPYRGRGQRGRGGGRRPQYKDNRDYYSNRSDNYSRDQDYRNDNRQRYQ
RQEDYHQDQRPERSYRNQRNSYQSDQGGEGYKSQRSDNRHWNQQGDAYINEDYRKEQPAR
NSQSVSDKETIRSYPRTREWTNTNYKKQREQLYHEQEERNDRNAHYSNRTNVSRGREVKS
YSKERRRPPAAKSQEEDVVETETASVDKETTGLEESLEKLTIKVESSHHGEGDTTITRTI
TNEAAHKPASNNYPNVPQQEMKQPRHTPPKPVQRGGSHARQEGSAPSKSSPQRGGHSRPK
RYSSQRQRQMPEAAPPPAMHLPALMEGPARGPQFYDPGFQGPMYHPNANPPTTLDGTPPP
PPGPPHTGQPPPPPPGDHMMRQGMMVQHEMNMHPGMQHPSQPHMPVPNPNMYTPVSMATQ
PPPPPPPVGTYAPAFVSQGVVNYSVPPGPAYQMAPPVPVSAPIPTPAPAPAQVPVAVPMQ
QYPVKQPPQGQMYGGVTYYSTEQQRRVQRAPPRRPINRIPIQPPPESENAKKGDQKASHE
DISHPQEMAQQSQEVIQQPQEVMAPPDDVSQVQSEHAMQQQQQQVDEQEWRQSDDQTWQE
NKDDWQDVGEQQSEQSEVQATVTTDEQQNQDSQPQTEKTQSPLPKEAEKPEQQESQQEVE
QPVQQTQQRGEREQQKVEQPVQAHLQVEEIVQLEEQQPLQ
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaagacgtcgaagacggcggctttcagggtcagatgacggaagcgacgacgac
ctgctttcgagcgataatagccaggacagggacgccagatcagactgtgaaagcgagact
ggtcatgataaggattttaaaaaaagcaatgatgatgaaaattctgatgagtatgaaagt
gctgaggatcaccgatcacagggtgaagaaggtgatgatgatgagtacacagatgaagaa
gaaggaagtgagcaagatgaaggcaatgtgaaggaagagagaacaagaggagatggacag
gaggaaaaacagctagacactgatcaggaccgacagaatccgcagtacattcccaggaaa
gggccgtattttgaacacgatgtgcggtatacagatgaaaataaagacggcagatcggca
agacctaacatcaggaaaaaactatggaaggaaagcgagaagtgggcgcatgacatgtac
agagaggatgaacaagccccaaagtctagggaagaaattgtgatggtgtacggctttgac
atgagatcatcagatcataaccaaagaggttacccaagaccatacaggggaagaggccag
aggggccgaggagggggaagacgccctcagtacaaggataatagggattactacagcaat
agaagtgacaattactcccgggatcaggattacagaaacgacaaccggcagagataccag
cggcaagaggattatcaccaggatcagagaccggagcggtcgtaccggaaccagagaaac
agctaccagtccgaccaaggcggtgaagggtataaaagccagcggagtgacaatcggcac
tggaatcaacaaggtgatgcctacatcaatgaggactatcgcaaggaacaacctgcccgg
aattctcagtcagttagtgataaggaaacaatccggtcgtacccacggactcgtgaatgg
acaaacacaaattataaaaaacaacgcgaacaattgtaccacgagcaggaggaaagaaat
gatagaaacgcccattattcaaataggactaatgtttccaggggtagggaggttaagtcg
tactccaaggagagacgccggccaccggccgcaaagagccaggaggaggatgttgtagaa
acggaaactgccagcgtagacaaggaaacaacagggttagaggaaagtcttgaaaagttg
acgataaaagtggagtcatcacatcacggagaaggggataccactatcacaagaactatt
actaatgaagcagctcacaagccagcttcaaacaattatccaaatgttcctcaacaagaa
atgaaacagccaagacacactcctccgaagccagtgcaacgaggtggtagccatgccaga
caggagggcagtgcaccatccaagtcatcccctcagaggggtggccattcaaggccaaag
agatactcctcccagaggcaaagacagatgccggaagctgcccctccaccagctatgcac
ctccctgcattaatggaaggtcccgcccgagggccacagttctatgatccaggtttccag
ggacccatgtaccatcccaacgccaatccacctaccactcttgatggaaccccaccccct
ccacctggacctccccacacagggcagccccctcctcctcctccaggtgaccatatgatg
agacaaggcatgatggtgcaacatgaaatgaacatgcatccaggcatgcagcatccatca
cagccacacatgccggtgccaaatcccaacatgtacaccccagtgtccatggcaacccag
cctcctcctccacctcccccagtgggaacttacgctccagccttcgtatcgcaaggagtg
gtcaattacagcgtacctcctgggccagcgtaccaaatggcgccgccagtgccagtgtcg
gctccaattccaacgccagcgccagcacctgcccaagtgccagtagctgtacctatgcag
cagtacccagtaaagcaaccaccacagggtcagatgtatggaggtgtgacctactactcc
actgaacaacaaagaagagttcaaagagcgccccctagaagaccaatcaacagaatacca
attcaaccgccaccagaatcagagaacgcaaagaagggtgatcaaaaggcaagccatgag
gacatatcgcatccacaggaaatggcacagcagtcacaggaagtgatacaacagccccaa
gaagtgatggcgccacctgacgatgtgtcacaagtgcagtctgaacacgccatgcagcag
caacaacagcaagttgatgagcaagagtggcggcaatcggacgaccagacgtggcaagaa
aacaaagacgactggcaggatgtgggcgaacagcagagcgaacaatctgaagtgcaggcg
acagtcaccacagacgagcagcagaatcaggattcccaaccgcagacggaaaagacacag
tctccactgcccaaggaggctgaaaagccggagcagcaggagtcacaacaagaagtggaa
cagccagtgcagcaaacgcagcagaggggtgaacgggagcaacagaaagtggaacagcct
gtacaggcacacttgcaggttgaagagatcgtacagctggaggaacaacaacctctacag
tag
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