Ptychodera flava: 139144736
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Entry
139144736 CDS
T10724
Name
(RefSeq) histone deacetylase 6-like
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pfll Ptychodera flava
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pfll01009
]
139144736
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfll03019
]
139144736
04131 Membrane trafficking [BR:
pfll04131
]
139144736
03036 Chromosome and associated proteins [BR:
pfll03036
]
139144736
Enzymes [BR:
pfll01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
139144736
Protein phosphatases and associated proteins [BR:
pfll01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139144736
Messenger RNA biogenesis [BR:
pfll03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
139144736
Membrane trafficking [BR:
pfll04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
139144736
Chromosome and associated proteins [BR:
pfll03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
139144736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
139144736
NCBI-ProteinID:
XP_070571561
LinkDB
All DBs
Position
12:complement(3822654..3859828)
Genome browser
AA seq
1168 aa
AA seq
DB search
MADSEDRNEVTGRDPTSDLTSKPEQDEVQEVKVEEVKAENTEKQKKKPSKPSLEEIKRRG
REAMSAKRRDNEEDSDDDSGITVMIQEMSVAEDIPPPPVQGTGFIYDERMLKHGSVYDSE
PGKSEHPQRISSCYEHLKECGLIDRCQQVPGRVATIEELTMLHSEEYVDLMKRTSQMSTE
ELQKLAESYDSVCLSPDTFETASVAAGSVISLAEQIATGKIRNGFAIVRPPGHHAQRDIA
CGYGYFNNVALAAYHARYNLNLKRILIVDWDIHHGQGTQYLFEDDPSILYFSIHRYENAA
FWPHLQESNYDCIGSGNGAGFNINVPWNKVAMDDSDYIAVFQQILMPIAYEFDPELVLVS
AGFDSGLADPKGEMSVTPAGYAYMTHMLMSLAEGKLALVLEGGYNVSTVSDSFTMCVRIL
LGEPCPPLQTTKPCDSAIQSILDTISVHHQFWNCLQYQVFPTDHDTMTIGVEIKSEDVEE
EKTNEKEDKAIDSIVSEVKFTSPVHRTALVYDERMRKHRDQWNTSHPERPDRITRIFEIH
KAWKLLDRCLRVEARMATDPELLALHSSGHLEKMKESQGMKNRELFMLQMEYNSIYFHQT
SYECASLAAGSVFNVVKEVLTGQALNGVCITRPPGHHAEANAACGFCFFNNVALAARYAQ
KVFGLKRILIVDWDVHHGNGIQHMFDDDDSVLYISLHRYDHGMFYPGSPDANYDKVGKGR
GKGFNINVAWNGGKMGDAEYIAAFQQIVMPIAMEFSPELVLVSAGFDAAKGDPLGGYMIT
PEGYAHLTHMLTSLASGRVVVVLEGGYNLISISRSMAMCTKILLGDTCPSIEYSEPSPSA
VKCILNTLHAHHKYWQCLQFQVTLPEVKAVTSQTDEDTKENDSETITNRQPAGGDAGEAF
TEDRLITEGMAEMTITDLPVEREEIVETSKPSEETAENSKPKGKIPDTSKSEEDSGKTTR
TSEGIIDTSKTSQDEEEKIQMQNQEQAAVGTGQGIEKEDKLIAKEMQPESADVHNAKPTD
SEEHDSLSEAGAAASTASILQDQVTMYAVIPLNWCPHLDMVGDITDDGLDTRAPCKTCND
PRENWVCLICYEVYCGRYINEHMVEHSCVSEHPMTLSFSDFSVWCYVCDSYVHNEKLLPA
KRAAHRSKFGEDMPGFHQNLTAIAEETE
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggctgactcagaagataggaatgaggtcacaggtcgtgaccccacatctgatcttacc
tcaaaacccgaacaggatgaagtgcaagaagtgaaggtagaagaagtgaaggcagagaat
actgagaaacaaaagaaaaagccatcaaagccatcgttggaagaaattaaacgaagagga
cgggaagcaatgtctgccaaaagaagagataatgaagaggatagcgatgatgacagtggc
attactgtcatgatccaagaaatgagtgtagctgaggatatacctcctccaccagttcaa
gggacaggatttatttatgatgagaggatgttgaagcatggcagtgtatatgacagtgaa
ccaggaaaatcagaacaccctcagcgaattagctcttgttatgaacatctgaaggaatgt
ggtttgattgacagatgtcaacaagtgcctgggagagtggcaactattgaagaactaaca
atgttacacagtgaggagtatgtagacctgatgaagaggacatctcaaatgtcaacagaa
gaacttcaaaagttggcagaaagttatgattcagtttgtctcagtcctgacacatttgaa
acagcatccgtggcagcaggaagtgtcatctcattggctgaacagattgctacaggcaag
attcgaaatggttttgccattgtgcggccacctggtcaccatgcacagagagacatagcg
tgtggctatggttacttcaacaatgtggcactggctgcatatcatgctagatataacctc
aatttgaaaagaattttaattgtagattgggacattcaccatgggcaaggtacacagtat
ttattcgaagacgatccaagtattttatacttttcaatccatcgctatgaaaatgctgca
ttttggccacatttacaagaaagtaattatgactgtattggtagcgggaatggagctggt
tttaatatcaatgtaccatggaacaaagttgccatggatgacagtgactatatagctgtt
tttcaacagattctgatgccaatagcttatgaatttgatccagagctggtcttggtctct
gctggttttgactcaggattggccgatccaaagggtgaaatgagtgtgacaccagcagga
tatgcgtacatgacacatatgctgatgtcactagcagagggaaaattagcccttgtcttg
gagggtggttacaatgtctcaactgtatcagatagttttacaatgtgtgtacgcatctta
ctaggagagccttgcccacctctacaaacaaccaaaccctgtgacagtgcaatccagagt
atcctagataccatatctgtacatcatcagttttggaattgtcttcaatatcaagtgttt
ccaacagaccatgacaccatgaccattggtgtggaaataaagagtgaagacgtagaagaa
gaaaagacaaacgaaaaagaagataaagccattgacagtattgtgtctgaagtgaaattt
acatcaccagtgcataggacagctcttgtctacgatgaaagaatgcgaaaacatagggat
caatggaacacatctcatcctgagcgtccagacaggattactaggatatttgagattcat
aaagcttggaaattactggacagatgtcttagagtagaggcaagaatggcaactgatcca
gaattattagctttacatagctcaggacatttggagaagatgaaggaatcacaaggaatg
aaaaacagagaacttttcatgcttcaaatggaatacaactccatctactttcatcagaca
tcatatgaatgtgcaagtctagctgctggtagtgtattcaatgtagtcaaagaagtcctc
acaggacaggcattgaacggtgtctgcattacaaggccgccagggcaccatgcagaggcc
aatgcagcgtgtggattttgtttcttcaacaatgttgccttagcagctagatatgcacag
aaagtctttggactgaaaagaatattaattgttgactgggatgttcaccatggcaacggt
attcaacacatgtttgatgatgatgacagtgtattgtacatttcacttcatcgatacgat
catggaatgttttatcctggttctccggatgcaaactatgacaaagttggcaagggaaga
ggaaagggatttaatatcaatgttgcatggaatgggggaaagatgggagatgcagagtac
attgccgcttttcaacagattgtcatgccaattgcaatggagttttcacctgagttagtg
ttggtgtctgcaggatttgatgctgcaaagggagacccactgggtggatatatgataaca
cctgagggatatgcacatctgactcacatgctgacatcattggcaagtggaagagttgtt
gtagtactagagggtggatacaatctcatctccatatcacgctccatggcgatgtgtaca
aagattctactgggagatacatgtcctagtattgaatacagtgagccaagcccttcagct
gtgaagtgcatcctcaacacattacatgcacatcacaaatactggcaatgcttacagttt
caagtgacactacctgaagtcaaagctgttacatctcagacagatgaagatacgaaagaa
aacgatagtgagacaatcacaaatagacaaccagcaggtggagacgctggtgaggcattt
acagaagacaggttaataactgaaggaatggcagaaatgacaatcacagatcttccagtg
gaaagggaagaaattgttgaaacttcaaaaccttctgaggaaactgcagaaaattcaaaa
cccaaaggaaaaattcctgacacttccaaatctgaagaagatagtgggaaaactaccaga
acttctgaaggaattattgacacttccaaaacttctcaagatgaagaagagaagattcaa
atgcaaaatcaagaacaagctgcagtaggaactggccaaggaattgagaaggaagacaaa
ttaattgcaaaggagatgcaacctgaatcagcagatgtgcacaatgccaagccaacagat
tctgaagaacacgatagtctcagtgaagctggagctgctgcttccacagccagtatccta
caagatcaagtgacaatgtatgcagtaataccactgaactggtgtcctcatcttgacatg
gttggtgatattacagacgatggcctcgacactagagcaccatgtaaaacatgcaatgac
ccaagagaaaactgggtttgccttatctgctatgaggtgtactgtggcagatacatcaat
gaacacatggttgaacacagctgtgtgtcagaacatccaatgactctcagtttctcagat
ttttctgtttggtgttatgtatgtgattcctacgtacataatgagaaacttcttccagca
aagagggcagcacacaggagtaagtttggtgaagacatgccagggtttcatcaaaacttg
acagccatcgcagaagagactgaatga
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integrated database retrieval system
