Ptychodera flava: 139145011
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Entry
139145011 CDS
T10724
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
pfll Ptychodera flava
Pathway
pfll03082
ATP-dependent chromatin remodeling
pfll03250
Viral life cycle - HIV-1
Brite
Protein phosphatases and associated proteins [BR:
pfll01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139145011
Transcription machinery [BR:
pfll03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
139145011
SWI/SNF complex
139145011
Chromosome and associated proteins [BR:
pfll03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
139145011
PBAF complex
139145011
SWI/SNF complex
139145011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139145011
NCBI-ProteinID:
XP_070572001
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Position
12:11809316..11823822
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AA seq
385 aa
AA seq
DB search
MAAASRTFGKKPEKFQLVESGEWYMIGSEVGNYLRMFRGSLYKKYPSLWRRLATVDERKQ
IVSFGERSTAPEKKNGQNGFGQHSLATNVTLLKASEVQEILEGNDEKYKAVSISTEPTPL
REAKAKRRDWVPTLPNSSHHLDAVPCSTAINRNRIGPKRQRTFPMCFDDHDPALIHENAA
LPEVLVPIRLDMEIEGQKLRDTFTWNKNETLITPEIFAEILCDDLELNPLTFVPAISQAI
RTQMEAFPTDTSILEDQSDQRVILKLNIHVGNISLVDQFEWDMSEKDNSPEDFALKLCSE
LGLGGEFVTAMAYSIRGQLSWHQRTYAFSESPLPTVEIAVRNQAEADQWCPFLETLTDAE
MEKKIRDQDRNTRRMRRLANTAPTW
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcttcacgtacttttgggaagaaacccgagaaattccagcttgtagaaagc
ggagaatggtatatgatcgggtctgaagtgggtaattacctgcgtatgttccgtggttct
ctgtataagaagtacccatcactctggaggcgactcgctacagttgatgaaagaaaacaa
atcgtcagctttggagaacgaagcaccgcacctgagaagaaaaatggacaaaatggattt
ggtcagcatagcttggctaccaatgtcacgctattgaaggcatcggaagtgcaagaaatc
ctagaaggaaacgacgaaaagtacaaagcagtgtcaatttcaacagaaccaactccgttg
agggaagcaaaggccaagaggagagactgggttcccactttaccaaacagctcacaccac
ctcgatgccgtaccatgttccactgccatcaacagaaatagaatcggacccaagagacag
agaacattccctatgtgttttgatgaccatgatccagccctgatccatgagaatgctgcc
ctgccagaagtgcttgtacccatcaggttagatatggaaatagagggacagaagctaaga
gatacattcacctggaacaaaaacgaaacactaataacacctgagatcttcgccgagatc
ttgtgcgatgaccttgaattgaacccactgacctttgtacctgccatatcacaagccatc
cgaacacagatggaagcttttccgacagataccagcatactggaggaccagtctgatcaa
cgggttatacttaaattgaatatccatgtgggcaatatatcccttgttgaccaatttgaa
tgggacatgtcagagaaggacaacagcccagaagactttgcgctgaagctgtgttcagaa
cttggtttgggtggagagtttgtcacggctatggcatatagtatacggggacagctgagc
tggcatcagaggacatatgcgttcagtgaatctccactgccaacggttgagattgcagtg
aggaatcaggcagaggcggaccagtggtgtccattcttggaaacactgactgatgcggag
atggaaaagaagatcagagaccaagacagaaacaccagacgtatgcgtcggttagcgaac
acagcaccgacgtggtag
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